RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 MAS1LP35410 378 aa21.12■□□□□ 0.97
COL13A1-213ENST00000520267 RPP30P78346 268 aaKnown RBP21.12■□□□□ 0.97
COL13A1-213ENST00000520267 PMS2P11Q13670 270 aa21.12■□□□□ 0.97
COL13A1-213ENST00000520267 OR4A47Q6IF82 309 aa21.12■□□□□ 0.97
COL13A1-213ENST00000520267 TMEM170AQ8WVE7 144 aa21.12■□□□□ 0.97
COL13A1-213ENST00000520267 SAP30LQ9HAJ7 183 aa21.12■□□□□ 0.97
COL13A1-213ENST00000520267 SLC25A10Q9UBX3 287 aaPredicted RBP21.12■□□□□ 0.97
COL13A1-213ENST00000520267 C15orf61A6NNL5 157 aa21.12■□□□□ 0.97
COL13A1-213ENST00000520267 C17orf112F2Z3M2 114 aa21.12■□□□□ 0.97
COL13A1-213ENST00000520267 SLC25A48Q6ZT89 311 aaKnown RBP21.12■□□□□ 0.97
COL13A1-213ENST00000520267 ACTR3CQ9C0K3 210 aaPredicted RBP21.12■□□□□ 0.97
COL13A1-213ENST00000520267 LINC00312Q9Y6C7 94 aa21.12■□□□□ 0.97
COL13A1-213ENST00000520267 TRAV38-1A0A0B4J264 116 aa21.11■□□□□ 0.97
COL13A1-213ENST00000520267 DEFA4P12838 97 aa21.11■□□□□ 0.97
COL13A1-213ENST00000520267 RND1Q92730 232 aa21.11■□□□□ 0.97
COL13A1-213ENST00000520267 ADTRPQ96IZ2 230 aa21.11■□□□□ 0.97
COL13A1-213ENST00000520267 ROS1P08922 2347 aa21.11■□□□□ 0.97
COL13A1-213ENST00000520267 PRSS46E5RG02 174 aa21.11■□□□□ 0.97
COL13A1-213ENST00000520267 RBMS3Q6XE24 437 aaKnown RBP21.11■□□□□ 0.97
COL13A1-213ENST00000520267 RAB24Q969Q5 203 aa21.11■□□□□ 0.97
COL13A1-213ENST00000520267 TMEM178BH3BS89 294 aa21.1■□□□□ 0.97
COL13A1-213ENST00000520267 RPL35P42766 123 aaKnown RBP21.1■□□□□ 0.97
COL13A1-213ENST00000520267 HOXA1P49639 335 aaPredicted RBP21.1■□□□□ 0.97
COL13A1-213ENST00000520267 CD81P60033 236 aa21.1■□□□□ 0.97
COL13A1-213ENST00000520267 SMCO3A2RU48 225 aa21.09■□□□□ 0.97
COL13A1-213ENST00000520267 AKR1D1P51857 326 aa21.09■□□□□ 0.97
COL13A1-213ENST00000520267 TMEM30BQ3MIR4 351 aa21.09■□□□□ 0.97
COL13A1-213ENST00000520267 LINC00518Q8N0U6 118 aa21.09■□□□□ 0.97
COL13A1-213ENST00000520267 NEUROG1Q92886 237 aa21.09■□□□□ 0.97
COL13A1-213ENST00000520267 PPIAL4EA0A075B759 164 aa21.09■□□□□ 0.97
COL13A1-213ENST00000520267 TRGV8A0A0C4DH27 118 aa21.09■□□□□ 0.97
COL13A1-213ENST00000520267 PPIAL4DF5H284 164 aa21.09■□□□□ 0.97
COL13A1-213ENST00000520267 CT45A6P0DMU7 189 aa21.09■□□□□ 0.97
COL13A1-213ENST00000520267 CT45A5P0DMU8 189 aa21.09■□□□□ 0.97
COL13A1-213ENST00000520267 CT45A7P0DMV0 189 aa21.09■□□□□ 0.97
COL13A1-213ENST00000520267 PPIAL4FP0DN26 164 aa21.09■□□□□ 0.97
COL13A1-213ENST00000520267 SSX8Q7RTT4 187 aa21.09■□□□□ 0.97
COL13A1-213ENST00000520267 GATAD1Q8WUU5 269 aa21.09■□□□□ 0.97
COL13A1-213ENST00000520267 CCL17Q92583 94 aa21.09■□□□□ 0.97
COL13A1-213ENST00000520267 FOXA2Q9Y261 457 aaPredicted RBP21.09■□□□□ 0.97
COL13A1-213ENST00000520267 PPIAL4AQ9Y536 164 aa21.09■□□□□ 0.97
COL13A1-213ENST00000520267 MYOD1P15172 320 aa21.08■□□□□ 0.97
COL13A1-213ENST00000520267 RPL31P62899 125 aaKnown RBP21.08■□□□□ 0.97
COL13A1-213ENST00000520267 RBPJQ06330 500 aa21.08■□□□□ 0.97
COL13A1-213ENST00000520267 ZNF343Q6P1L6 599 aa21.08■□□□□ 0.97
COL13A1-213ENST00000520267 HEPN1Q6WQI6 88 aa21.08■□□□□ 0.97
COL13A1-213ENST00000520267 MALSU1Q96EH3 234 aa21.08■□□□□ 0.97
COL13A1-213ENST00000520267 TMEM14BQ9NUH8 114 aa21.08■□□□□ 0.97
COL13A1-213ENST00000520267 SHISA9B4DS77 424 aa21.08■□□□□ 0.96
COL13A1-213ENST00000520267 CCL3L1P16619 93 aa21.08■□□□□ 0.96
COL13A1-213ENST00000520267 TREML4Q6UXN2 200 aa21.08■□□□□ 0.96
COL13A1-213ENST00000520267 DMRTC2Q8IXT2 367 aaPredicted RBP21.08■□□□□ 0.96
COL13A1-213ENST00000520267 SNRPEP62304 92 aaKnown RBP21.07■□□□□ 0.96
COL13A1-213ENST00000520267 MEF2BQ02080 365 aaPredicted RBP21.07■□□□□ 0.96
COL13A1-213ENST00000520267 ACOT6Q3I5F7 207 aaPredicted RBP21.07■□□□□ 0.96
COL13A1-213ENST00000520267 GCSAMLQ5JQS6 135 aa21.07■□□□□ 0.96
COL13A1-213ENST00000520267 C1orf87Q8N0U7 546 aa21.07■□□□□ 0.96
COL13A1-213ENST00000520267 RNASE6Q93091 150 aaKnown RBP21.07■□□□□ 0.96
COL13A1-213ENST00000520267 E7EQL1 145 aa21.07■□□□□ 0.96
COL13A1-213ENST00000520267 CYB5BO43169 146 aa21.07■□□□□ 0.96
COL13A1-213ENST00000520267 HSPE1P61604 102 aaKnown RBP21.07■□□□□ 0.96
COL13A1-213ENST00000520267 MEF2CQ06413 473 aaPredicted RBP21.07■□□□□ 0.96
COL13A1-213ENST00000520267 LYPD2Q6UXB3 125 aa21.07■□□□□ 0.96
COL13A1-213ENST00000520267 GAL3ST2Q9H3Q3 398 aa21.07■□□□□ 0.96
COL13A1-213ENST00000520267 MS4A5Q9H3V2 200 aa21.07■□□□□ 0.96
COL13A1-213ENST00000520267 SDF2L1Q9HCN8 221 aa21.07■□□□□ 0.96
COL13A1-213ENST00000520267 POU2AF1Q16633 256 aa21.06■□□□□ 0.96
COL13A1-213ENST00000520267 GGACTQ9BVM4 153 aa21.06■□□□□ 0.96
COL13A1-213ENST00000520267 TMEM106BQ9NUM4 274 aa21.06■□□□□ 0.96
COL13A1-213ENST00000520267 VSTM5A8MXK1 200 aa21.06■□□□□ 0.96
COL13A1-213ENST00000520267 HRASP01112 189 aa21.06■□□□□ 0.96
COL13A1-213ENST00000520267 IGKV1-16P04430 117 aa21.06■□□□□ 0.96
COL13A1-213ENST00000520267 IFNA4P05014 189 aa21.06■□□□□ 0.96
COL13A1-213ENST00000520267 PSMB3P49720 205 aa21.06■□□□□ 0.96
COL13A1-213ENST00000520267 ELOBQ15370 118 aa21.06■□□□□ 0.96
COL13A1-213ENST00000520267 WDR25Q64LD2 544 aaPredicted RBP21.06■□□□□ 0.96
COL13A1-213ENST00000520267 TMEM200BQ69YZ2 307 aa21.06■□□□□ 0.96
COL13A1-213ENST00000520267 Q8WTZ3 238 aa21.06■□□□□ 0.96
COL13A1-213ENST00000520267 VKORC1Q9BQB6 163 aa21.06■□□□□ 0.96
COL13A1-213ENST00000520267 SIRT7Q9NRC8 400 aa21.06■□□□□ 0.96
COL13A1-213ENST00000520267 SLC35D1Q9NTN3 355 aa21.06■□□□□ 0.96
COL13A1-213ENST00000520267 PTPRQQ9UMZ3 2332 aa21.05■□□□□ 0.96
COL13A1-213ENST00000520267 B4DEV8 164 aa21.05■□□□□ 0.96
COL13A1-213ENST00000520267 CDC34P49427 236 aaPredicted RBP21.05■□□□□ 0.96
COL13A1-213ENST00000520267 TMPRSS3P57727 454 aa21.05■□□□□ 0.96
COL13A1-213ENST00000520267 PNRC1Q12796 327 aaPredicted RBP21.05■□□□□ 0.96
COL13A1-213ENST00000520267 NCMAPQ5T1S8 102 aa21.05■□□□□ 0.96
COL13A1-213ENST00000520267 OR13D1Q8NGV5 346 aa21.05■□□□□ 0.96
COL13A1-213ENST00000520267 URGCP-MRPS24S4R325 110 aa21.05■□□□□ 0.96
COL13A1-213ENST00000520267 CEP295Q9C0D2 2601 aa21.05■□□□□ 0.96
COL13A1-213ENST00000520267 TNFRSF13BO14836 293 aaPredicted RBP21.04■□□□□ 0.96
COL13A1-213ENST00000520267 ZNF714Q96N38 554 aa21.04■□□□□ 0.96
COL13A1-213ENST00000520267 MGST2Q99735 147 aa21.04■□□□□ 0.96
COL13A1-213ENST00000520267 NGBQ9NPG2 151 aa21.04■□□□□ 0.96
COL13A1-213ENST00000520267 SRRM4A7MD48 611 aaKnown RBP21.04■□□□□ 0.96
COL13A1-213ENST00000520267 CXCL1P09341 107 aa21.04■□□□□ 0.96
COL13A1-213ENST00000520267 OR10A7Q8NGE5 316 aa21.04■□□□□ 0.96
COL13A1-213ENST00000520267 MSRB2Q9Y3D2 182 aa21.04■□□□□ 0.96
COL13A1-213ENST00000520267 OR51B2Q9Y5P1 312 aa21.04■□□□□ 0.96
COL13A1-213ENST00000520267 MPDU1O75352 247 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms