RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 MSNP26038 577 aaKnown RBP2.43□□□□□ -2.02
HMGB1P46-201ENST00000520062 PSME3P61289 254 aa2.43□□□□□ -2.02
HMGB1P46-201ENST00000520062 MIAQ16674 131 aa2.43□□□□□ -2.02
HMGB1P46-201ENST00000520062 ZNF181Q2M3W8 571 aa2.43□□□□□ -2.02
HMGB1P46-201ENST00000520062 ACOT6Q3I5F7 207 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P46-201ENST00000520062 OR1L8Q8NGR8 309 aa2.43□□□□□ -2.02
HMGB1P46-201ENST00000520062 ZNF675Q8TD23 568 aa2.43□□□□□ -2.02
HMGB1P46-201ENST00000520062 ZCCHC13Q8WW36 166 aaKnown RBP2.43□□□□□ -2.02
HMGB1P46-201ENST00000520062 FGF13Q92913 245 aa2.43□□□□□ -2.02
HMGB1P46-201ENST00000520062 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P46-201ENST00000520062 NLRC5Q86WI3 1866 aa2.43□□□□□ -2.02
HMGB1P46-201ENST00000520062 ZNF638Q14966 1978 aaKnown RBP2.42□□□□□ -2.02
HMGB1P46-201ENST00000520062 TRGV5A0A0B4J1U4 118 aa2.42□□□□□ -2.02
HMGB1P46-201ENST00000520062 TMEM114B3SHH9 223 aa2.42□□□□□ -2.02
HMGB1P46-201ENST00000520062 LY6LH3BQJ8 138 aa2.42□□□□□ -2.02
HMGB1P46-201ENST00000520062 BHLHE40O14503 412 aa2.42□□□□□ -2.02
HMGB1P46-201ENST00000520062 TXNDC9O14530 226 aa2.42□□□□□ -2.02
HMGB1P46-201ENST00000520062 CHP2O43745 196 aa2.42□□□□□ -2.02
HMGB1P46-201ENST00000520062 FGF6P10767 208 aa2.42□□□□□ -2.02
HMGB1P46-201ENST00000520062 AP3S2P59780 193 aa2.42□□□□□ -2.02
HMGB1P46-201ENST00000520062 AP1S1P61966 158 aa2.42□□□□□ -2.02
HMGB1P46-201ENST00000520062 RANP62826 216 aaKnown RBP2.42□□□□□ -2.02
HMGB1P46-201ENST00000520062 STX5Q13190 355 aa2.42□□□□□ -2.02
HMGB1P46-201ENST00000520062 GLT8D1Q68CQ7 371 aa2.42□□□□□ -2.02
HMGB1P46-201ENST00000520062 LHFPL1Q86WI0 220 aa2.42□□□□□ -2.02
HMGB1P46-201ENST00000520062 C20orf196Q8IYI0 205 aa2.42□□□□□ -2.02
HMGB1P46-201ENST00000520062 ZNF283Q8N7M2 679 aa2.42□□□□□ -2.02
HMGB1P46-201ENST00000520062 NDUFB11Q9NX14 153 aa2.42□□□□□ -2.02
HMGB1P46-201ENST00000520062 CACNA1SQ13698 1873 aa2.41□□□□□ -2.02
HMGB1P46-201ENST00000520062 PSMD12O00232 456 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P46-201ENST00000520062 HOXA6P31267 233 aa2.41□□□□□ -2.02
HMGB1P46-201ENST00000520062 B2MP61769 119 aa2.41□□□□□ -2.02
HMGB1P46-201ENST00000520062 RPL30P62888 115 aaKnown RBP2.41□□□□□ -2.02
HMGB1P46-201ENST00000520062 SRSF6Q13247 344 aaKnown RBP2.41□□□□□ -2.02
HMGB1P46-201ENST00000520062 SS18Q15532 418 aa2.41□□□□□ -2.02
HMGB1P46-201ENST00000520062 AKIRIN2Q53H80 203 aa2.41□□□□□ -2.02
HMGB1P46-201ENST00000520062 PABPC1L2AQ5JQF8 200 aa2.41□□□□□ -2.02
HMGB1P46-201ENST00000520062 AGTRAPQ6RW13 159 aa2.41□□□□□ -2.02
HMGB1P46-201ENST00000520062 SLC35F6Q8N357 371 aa2.41□□□□□ -2.02
HMGB1P46-201ENST00000520062 TBC1D19Q8N5T2 526 aa2.41□□□□□ -2.02
HMGB1P46-201ENST00000520062 OR4X1Q8NH49 305 aa2.41□□□□□ -2.02
HMGB1P46-201ENST00000520062 MRPS24Q96EL2 167 aaKnown RBP2.41□□□□□ -2.02
HMGB1P46-201ENST00000520062 CHMP6Q96FZ7 201 aa2.41□□□□□ -2.02
HMGB1P46-201ENST00000520062 PRAP1Q96NZ9 151 aa2.41□□□□□ -2.02
HMGB1P46-201ENST00000520062 CENPHQ9H3R5 247 aa2.41□□□□□ -2.02
HMGB1P46-201ENST00000520062 REREQ9P2R6 1566 aa2.4□□□□□ -2.02
HMGB1P46-201ENST00000520062 TRGV4A0A0C4DH28 118 aa2.4□□□□□ -2.03
HMGB1P46-201ENST00000520062 PQLC2LA1A4F0 135 aa2.4□□□□□ -2.03
HMGB1P46-201ENST00000520062 SRP19P09132 144 aaKnown RBP2.4□□□□□ -2.03
HMGB1P46-201ENST00000520062 CSRP1P21291 193 aaKnown RBP2.4□□□□□ -2.03
HMGB1P46-201ENST00000520062 CA5AP35218 305 aa2.4□□□□□ -2.03
HMGB1P46-201ENST00000520062 RAB13P51153 203 aa2.4□□□□□ -2.03
HMGB1P46-201ENST00000520062 ARPC4P59998 168 aa2.4□□□□□ -2.03
HMGB1P46-201ENST00000520062 SNCBQ16143 134 aa2.4□□□□□ -2.03
HMGB1P46-201ENST00000520062 Q6ZS52 159 aa2.4□□□□□ -2.03
HMGB1P46-201ENST00000520062 SSX8Q7RTT4 187 aa2.4□□□□□ -2.03
HMGB1P46-201ENST00000520062 OR5J2Q8NH18 312 aa2.4□□□□□ -2.03
HMGB1P46-201ENST00000520062 DCUN1D1Q96GG9 259 aa2.4□□□□□ -2.03
HMGB1P46-201ENST00000520062 TTTY13Q9BZ97 58 aa2.4□□□□□ -2.03
HMGB1P46-201ENST00000520062 CXCL16Q9H2A7 254 aa2.4□□□□□ -2.03
HMGB1P46-201ENST00000520062 PEG3Q9GZU2 1588 aa2.4□□□□□ -2.03
HMGB1P46-201ENST00000520062 PLXNB1O43157 2135 aa2.39□□□□□ -2.03
HMGB1P46-201ENST00000520062 A0A0J9YW62 118 aa2.39□□□□□ -2.03
HMGB1P46-201ENST00000520062 ZNF878C9JN71 531 aa2.39□□□□□ -2.03
HMGB1P46-201ENST00000520062 RPSAP08865 295 aaKnown RBP2.39□□□□□ -2.03
HMGB1P46-201ENST00000520062 HIST1H1TP22492 207 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P46-201ENST00000520062 OR4D2P58180 307 aa2.39□□□□□ -2.03
HMGB1P46-201ENST00000520062 ZNF90Q03938 601 aa2.39□□□□□ -2.03
HMGB1P46-201ENST00000520062 EDDM3AQ14507 147 aa2.39□□□□□ -2.03
HMGB1P46-201ENST00000520062 OR2T4Q8NH00 348 aa2.39□□□□□ -2.03
HMGB1P46-201ENST00000520062 PHOSPHO2Q8TCD6 241 aa2.39□□□□□ -2.03
HMGB1P46-201ENST00000520062 DHX57Q6P158 1386 aaKnown RBP2.38□□□□□ -2.03
HMGB1P46-201ENST00000520062 LTBP2Q14767 1821 aa2.38□□□□□ -2.03
HMGB1P46-201ENST00000520062 TMEM269A0A1B0GVZ9 245 aa2.38□□□□□ -2.03
HMGB1P46-201ENST00000520062 FNDC10F2Z333 226 aa2.38□□□□□ -2.03
HMGB1P46-201ENST00000520062 DSCAMO60469 2012 aa2.38□□□□□ -2.03
HMGB1P46-201ENST00000520062 ATP5HO75947 161 aa2.38□□□□□ -2.03
HMGB1P46-201ENST00000520062 OR5F1O95221 314 aa2.38□□□□□ -2.03
HMGB1P46-201ENST00000520062 NSA2O95478 260 aaKnown RBP2.38□□□□□ -2.03
HMGB1P46-201ENST00000520062 ZNF705DP0CH99 300 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P46-201ENST00000520062 ALDH3A1P30838 453 aa2.38□□□□□ -2.03
HMGB1P46-201ENST00000520062 CSN1S1P47710 185 aa2.38□□□□□ -2.03
HMGB1P46-201ENST00000520062 ERVS71-1P61550 626 aa2.38□□□□□ -2.03
HMGB1P46-201ENST00000520062 VBP1P61758 197 aa2.38□□□□□ -2.03
HMGB1P46-201ENST00000520062 GRK1Q15835 563 aa2.38□□□□□ -2.03
HMGB1P46-201ENST00000520062 GUK1Q16774 197 aa2.38□□□□□ -2.03
HMGB1P46-201ENST00000520062 SLC35E3Q7Z769 313 aa2.38□□□□□ -2.03
HMGB1P46-201ENST00000520062 STX12Q86Y82 276 aa2.38□□□□□ -2.03
HMGB1P46-201ENST00000520062 MRPL27Q9P0M9 148 aaKnown RBP2.38□□□□□ -2.03
HMGB1P46-201ENST00000520062 PRO2289Q9P1D8 64 aa2.38□□□□□ -2.03
HMGB1P46-201ENST00000520062 HHLA3Q9XRX5 114 aa2.38□□□□□ -2.03
HMGB1P46-201ENST00000520062 FLT4P35916 1363 aa2.37□□□□□ -2.03
HMGB1P46-201ENST00000520062 ZFYVE9O95405 1425 aa2.37□□□□□ -2.03
HMGB1P46-201ENST00000520062 I3L521 148 aa2.37□□□□□ -2.03
HMGB1P46-201ENST00000520062 TTRP02766 147 aa2.37□□□□□ -2.03
HMGB1P46-201ENST00000520062 BPGMP07738 259 aa2.37□□□□□ -2.03
HMGB1P46-201ENST00000520062 CCL5P13501 91 aa2.37□□□□□ -2.03
HMGB1P46-201ENST00000520062 PSMB8P28062 276 aa2.37□□□□□ -2.03
HMGB1P46-201ENST00000520062 S100A7P31151 101 aa2.37□□□□□ -2.03
HMGB1P46-201ENST00000520062 EMP1P54849 157 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms