RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 RAB3DO95716 219 aa8.67□□□□□ -1.02
SCARNA20-201ENST00000516768 ZNF735P0CB33 412 aa8.67□□□□□ -1.02
SCARNA20-201ENST00000516768 NQO2P16083 231 aa8.67□□□□□ -1.02
SCARNA20-201ENST00000516768 CD33P20138 364 aa8.67□□□□□ -1.02
SCARNA20-201ENST00000516768 S100GP29377 79 aa8.67□□□□□ -1.02
SCARNA20-201ENST00000516768 MAS1LP35410 378 aa8.67□□□□□ -1.02
SCARNA20-201ENST00000516768 RUNX1Q01196 453 aa8.67□□□□□ -1.02
SCARNA20-201ENST00000516768 TNXAQ16473 311 aa8.67□□□□□ -1.02
SCARNA20-201ENST00000516768 POU2AF1Q16633 256 aa8.67□□□□□ -1.02
SCARNA20-201ENST00000516768 ZNF585BQ52M93 769 aa8.67□□□□□ -1.02
SCARNA20-201ENST00000516768 MRPL41Q8IXM3 137 aaKnown RBP8.67□□□□□ -1.02
SCARNA20-201ENST00000516768 SLC38A6Q8IZM9 456 aa8.67□□□□□ -1.02
SCARNA20-201ENST00000516768 CADM3Q8N126 398 aa8.67□□□□□ -1.02
SCARNA20-201ENST00000516768 OR5T1Q8NG75 326 aa8.67□□□□□ -1.02
SCARNA20-201ENST00000516768 OR4A5Q8NH83 315 aa8.67□□□□□ -1.02
SCARNA20-201ENST00000516768 RAX2Q96IS3 184 aa8.67□□□□□ -1.02
SCARNA20-201ENST00000516768 FXYD6Q9H0Q3 95 aa8.67□□□□□ -1.02
SCARNA20-201ENST00000516768 SLA2Q9H6Q3 261 aa8.67□□□□□ -1.02
SCARNA20-201ENST00000516768 FAM212BQ9NTI7 297 aaPredicted RBP8.67□□□□□ -1.02
SCARNA20-201ENST00000516768 BET1LQ9NYM9 111 aa8.67□□□□□ -1.02
SCARNA20-201ENST00000516768 ANKRD20A5PA0PJZ0 165 aa8.66□□□□□ -1.02
SCARNA20-201ENST00000516768 DPPA5A6NC42 116 aa8.66□□□□□ -1.02
SCARNA20-201ENST00000516768 H3BUA1 57 aa8.66□□□□□ -1.02
SCARNA20-201ENST00000516768 RLN1P04808 185 aa8.66□□□□□ -1.02
SCARNA20-201ENST00000516768 S100A5P33763 92 aa8.66□□□□□ -1.02
SCARNA20-201ENST00000516768 LPAR6P43657 344 aa8.66□□□□□ -1.02
SCARNA20-201ENST00000516768 MEF2DQ14814 521 aa8.66□□□□□ -1.02
SCARNA20-201ENST00000516768 PHLDA2Q53GA4 152 aa8.66□□□□□ -1.02
SCARNA20-201ENST00000516768 OXLD1Q5BKU9 147 aa8.66□□□□□ -1.02
SCARNA20-201ENST00000516768 SAMD5Q5TGI4 173 aa8.66□□□□□ -1.02
SCARNA20-201ENST00000516768 OR4A47Q6IF82 309 aa8.66□□□□□ -1.02
SCARNA20-201ENST00000516768 SSX9Q7RTT3 188 aa8.66□□□□□ -1.02
SCARNA20-201ENST00000516768 LINC00482Q8N8I6 264 aa8.66□□□□□ -1.02
SCARNA20-201ENST00000516768 CASTOR1Q8WTX7 329 aa8.66□□□□□ -1.02
SCARNA20-201ENST00000516768 SRSF12Q8WXF0 261 aaKnown RBP8.66□□□□□ -1.02
SCARNA20-201ENST00000516768 ZNF486Q96H40 463 aaPredicted RBP8.66□□□□□ -1.02
SCARNA20-201ENST00000516768 MS4A10Q96PG2 267 aa8.66□□□□□ -1.02
SCARNA20-201ENST00000516768 SPIN2AQ99865 258 aa8.66□□□□□ -1.02
SCARNA20-201ENST00000516768 SPIN2BQ9BPZ2 258 aa8.66□□□□□ -1.02
SCARNA20-201ENST00000516768 THAP7Q9BT49 309 aaPredicted RBP8.66□□□□□ -1.02
SCARNA20-201ENST00000516768 GNB4Q9HAV0 340 aa8.66□□□□□ -1.02
SCARNA20-201ENST00000516768 E7EUB6 86 aa8.65□□□□□ -1.02
SCARNA20-201ENST00000516768 G3V4G9 280 aa8.65□□□□□ -1.02
SCARNA20-201ENST00000516768 UPK2O00526 184 aa8.65□□□□□ -1.02
SCARNA20-201ENST00000516768 MPPED1O15442 326 aa8.65□□□□□ -1.02
SCARNA20-201ENST00000516768 S1PR2O95136 353 aa8.65□□□□□ -1.02
SCARNA20-201ENST00000516768 DUS4LO95620 317 aaKnown RBP8.65□□□□□ -1.02
SCARNA20-201ENST00000516768 FGF2P09038 288 aa8.65□□□□□ -1.02
SCARNA20-201ENST00000516768 AKAIN1P0CW23 69 aa8.65□□□□□ -1.02
SCARNA20-201ENST00000516768 PTBP1P26599 531 aaKnown RBP eCLIP8.65□□□□□ -1.02
SCARNA20-201ENST00000516768 ETV6P41212 452 aa8.65□□□□□ -1.02
SCARNA20-201ENST00000516768 RND3P61587 244 aa8.65□□□□□ -1.02
SCARNA20-201ENST00000516768 RPL8P62917 257 aaKnown RBP8.65□□□□□ -1.02
SCARNA20-201ENST00000516768 DEFA6Q01524 100 aa8.65□□□□□ -1.02
SCARNA20-201ENST00000516768 TBC1D26Q86UD7 250 aa8.65□□□□□ -1.02
SCARNA20-201ENST00000516768 CCDC190Q86UF4 302 aa8.65□□□□□ -1.02
SCARNA20-201ENST00000516768 TTC9CQ8N5M4 171 aa8.65□□□□□ -1.02
SCARNA20-201ENST00000516768 OR11H1Q8NG94 326 aa8.65□□□□□ -1.02
SCARNA20-201ENST00000516768 ZFAND1Q8TCF1 268 aa8.65□□□□□ -1.02
SCARNA20-201ENST00000516768 DUX3Q96PT4 197 aa8.65□□□□□ -1.02
SCARNA20-201ENST00000516768 PHB2Q99623 299 aa8.65□□□□□ -1.02
SCARNA20-201ENST00000516768 HRASLSQ9HDD0 168 aa8.65□□□□□ -1.02
SCARNA20-201ENST00000516768 SLC2A9Q9NRM0 540 aa8.65□□□□□ -1.02
SCARNA20-201ENST00000516768 ZNF355PQ9NSJ1 428 aa8.65□□□□□ -1.02
SCARNA20-201ENST00000516768 COMMD9Q9P000 198 aa8.65□□□□□ -1.02
SCARNA20-201ENST00000516768 NOTCH1P46531 2555 aa8.64□□□□□ -1.03
SCARNA20-201ENST00000516768 TRAV3A0A0B4J244 114 aa8.64□□□□□ -1.03
SCARNA20-201ENST00000516768 A0A0G2JLM5 398 aa8.64□□□□□ -1.03
SCARNA20-201ENST00000516768 DISC1C4P0D8 188 aa8.64□□□□□ -1.03
SCARNA20-201ENST00000516768 KRASP01116 189 aa8.64□□□□□ -1.03
SCARNA20-201ENST00000516768 TRGV3P03979 118 aa8.64□□□□□ -1.03
SCARNA20-201ENST00000516768 OR9G9P0C7N8 305 aa8.64□□□□□ -1.03
SCARNA20-201ENST00000516768 PGAM2P15259 253 aa8.64□□□□□ -1.03
SCARNA20-201ENST00000516768 IGLL1P15814 213 aa8.64□□□□□ -1.03
SCARNA20-201ENST00000516768 DEFB136Q30KP8 78 aa8.64□□□□□ -1.03
SCARNA20-201ENST00000516768 SCGB2B2Q4G0G5 96 aa8.64□□□□□ -1.03
SCARNA20-201ENST00000516768 C10orf55Q5SWW7 151 aa8.64□□□□□ -1.03
SCARNA20-201ENST00000516768 KPRPQ5T749 579 aaPredicted RBP8.64□□□□□ -1.03
SCARNA20-201ENST00000516768 C1QL4Q86Z23 238 aa8.64□□□□□ -1.03
SCARNA20-201ENST00000516768 ADAD2Q8NCV1 583 aaKnown RBP8.64□□□□□ -1.03
SCARNA20-201ENST00000516768 DMBX1Q8NFW5 382 aa8.64□□□□□ -1.03
SCARNA20-201ENST00000516768 OR1N2Q8NGR9 330 aa8.64□□□□□ -1.03
SCARNA20-201ENST00000516768 MRGPRFQ96AM1 343 aa8.64□□□□□ -1.03
SCARNA20-201ENST00000516768 RCC1LQ96I51 464 aaKnown RBP8.64□□□□□ -1.03
SCARNA20-201ENST00000516768 OR5B12Q96R08 314 aa8.64□□□□□ -1.03
SCARNA20-201ENST00000516768 V9GYH0 126 aa8.64□□□□□ -1.03
SCARNA20-201ENST00000516768 TRBV9A0A0B4J1U6 114 aa8.63□□□□□ -1.03
SCARNA20-201ENST00000516768 A0A1B0GW64 132 aa8.63□□□□□ -1.03
SCARNA20-201ENST00000516768 HMX3A6NHT5 357 aa8.63□□□□□ -1.03
SCARNA20-201ENST00000516768 CGB1A6NKQ9 187 aa8.63□□□□□ -1.03
SCARNA20-201ENST00000516768 MARCH11A6NNE9 402 aa8.63□□□□□ -1.03
SCARNA20-201ENST00000516768 TEX22C9J3V5 150 aa8.63□□□□□ -1.03
SCARNA20-201ENST00000516768 APELAP0DMC3 54 aa8.63□□□□□ -1.03
SCARNA20-201ENST00000516768 HLA-GP17693 338 aa8.63□□□□□ -1.03
SCARNA20-201ENST00000516768 PI3P19957 117 aa8.63□□□□□ -1.03
SCARNA20-201ENST00000516768 ECI1P42126 302 aa8.63□□□□□ -1.03
SCARNA20-201ENST00000516768 RPL27AP46776 148 aaKnown RBP8.63□□□□□ -1.03
SCARNA20-201ENST00000516768 PIGPP57054 158 aa8.63□□□□□ -1.03
SCARNA20-201ENST00000516768 TPPP2P59282 170 aa8.63□□□□□ -1.03
SCARNA20-201ENST00000516768 FHL3Q13643 280 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms