RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 BAALC-AS2P0C853 105 aa-3.6□□□□□ -2.99
RNU6-539P-201ENST00000516665 ORM2P19652 201 aa-3.6□□□□□ -2.99
RNU6-539P-201ENST00000516665 PYCR1P32322 319 aa-3.6□□□□□ -2.99
RNU6-539P-201ENST00000516665 MLF1P58340 268 aa-3.6□□□□□ -2.99
RNU6-539P-201ENST00000516665 PAFAH1B2P68402 229 aa-3.6□□□□□ -2.99
RNU6-539P-201ENST00000516665 CCDC112Q8NEF3 446 aa-3.6□□□□□ -2.99
RNU6-539P-201ENST00000516665 OR5B17Q8NGF7 314 aa-3.6□□□□□ -2.99
RNU6-539P-201ENST00000516665 PLIN2Q99541 437 aa-3.6□□□□□ -2.99
RNU6-539P-201ENST00000516665 OR8D2Q9GZM6 311 aa-3.6□□□□□ -2.99
RNU6-539P-201ENST00000516665 HAUS4Q9H6D7 363 aa-3.6□□□□□ -2.99
RNU6-539P-201ENST00000516665 SACSQ9NZJ4 4579 aa-3.6□□□□□ -2.99
RNU6-539P-201ENST00000516665 TMEM269A0A1B0GVZ9 245 aa-3.61□□□□□ -2.99
RNU6-539P-201ENST00000516665 TACSTD2P09758 323 aa-3.61□□□□□ -2.99
RNU6-539P-201ENST00000516665 CRYGAP11844 174 aa-3.61□□□□□ -2.99
RNU6-539P-201ENST00000516665 GFAPP14136 432 aa-3.61□□□□□ -2.99
RNU6-539P-201ENST00000516665 CD9P21926 228 aa-3.61□□□□□ -2.99
RNU6-539P-201ENST00000516665 ACTR1BP42025 376 aa-3.61□□□□□ -2.99
RNU6-539P-201ENST00000516665 OR1E2P47887 323 aa-3.61□□□□□ -2.99
RNU6-539P-201ENST00000516665 CDK9P50750 372 aaKnown RBP-3.61□□□□□ -2.99
RNU6-539P-201ENST00000516665 HLA-DRB3P79483 266 aa-3.61□□□□□ -2.99
RNU6-539P-201ENST00000516665 MT1HP80294 61 aa-3.61□□□□□ -2.99
RNU6-539P-201ENST00000516665 BST2Q10589 180 aaKnown RBP-3.61□□□□□ -2.99
RNU6-539P-201ENST00000516665 CBX3Q13185 183 aa-3.61□□□□□ -2.99
RNU6-539P-201ENST00000516665 MRPL23Q16540 153 aaKnown RBP-3.61□□□□□ -2.99
RNU6-539P-201ENST00000516665 RBM48Q5RL73 367 aaKnown RBP-3.61□□□□□ -2.99
RNU6-539P-201ENST00000516665 PLCXD3Q63HM9 321 aa-3.61□□□□□ -2.99
RNU6-539P-201ENST00000516665 LUZP2Q86TE4 346 aa-3.61□□□□□ -2.99
RNU6-539P-201ENST00000516665 NELFCDQ8IXH7 590 aa-3.61□□□□□ -2.99
RNU6-539P-201ENST00000516665 LRRC34Q8IZ02 419 aa-3.61□□□□□ -2.99
RNU6-539P-201ENST00000516665 CCDC43Q96MW1 224 aaKnown RBP-3.61□□□□□ -2.99
RNU6-539P-201ENST00000516665 ZMAT2Q96NC0 199 aaKnown RBP-3.61□□□□□ -2.99
RNU6-539P-201ENST00000516665 BIRC8Q96P09 236 aa-3.61□□□□□ -2.99
RNU6-539P-201ENST00000516665 UTP23Q9BRU9 249 aaKnown RBP-3.61□□□□□ -2.99
RNU6-539P-201ENST00000516665 UCK2Q9BZX2 261 aa-3.61□□□□□ -2.99
RNU6-539P-201ENST00000516665 SLC38A1Q9H2H9 487 aa-3.61□□□□□ -2.99
RNU6-539P-201ENST00000516665 MS4A12Q9NXJ0 267 aa-3.61□□□□□ -2.99
RNU6-539P-201ENST00000516665 PSMC3IPQ9P2W1 217 aaPredicted RBP-3.61□□□□□ -2.99
RNU6-539P-201ENST00000516665 ANXA10Q9UJ72 324 aa-3.61□□□□□ -2.99
RNU6-539P-201ENST00000516665 U3KQV3 271 aa-3.61□□□□□ -2.99
RNU6-539P-201ENST00000516665 PKD1L2Q7Z442 2459 aa-3.61□□□□□ -2.99
RNU6-539P-201ENST00000516665 APOBP04114 4563 aaKnown RBP-3.61□□□□□ -2.99
RNU6-539P-201ENST00000516665 ATG2AQ2TAZ0 1938 aa-3.62□□□□□ -2.99
RNU6-539P-201ENST00000516665 SULT1A3P0DMM9 295 aa-3.62□□□□□ -2.99
RNU6-539P-201ENST00000516665 SULT1A4P0DMN0 295 aa-3.62□□□□□ -2.99
RNU6-539P-201ENST00000516665 SLC2A1P11166 492 aa-3.62□□□□□ -2.99
RNU6-539P-201ENST00000516665 TNNT2P45379 298 aaPredicted RBP-3.62□□□□□ -2.99
RNU6-539P-201ENST00000516665 CBX5P45973 191 aa-3.62□□□□□ -2.99
RNU6-539P-201ENST00000516665 TAS2R39P59534 338 aa-3.62□□□□□ -2.99
RNU6-539P-201ENST00000516665 SCGB2A2Q13296 93 aa-3.62□□□□□ -2.99
RNU6-539P-201ENST00000516665 TPD52L1Q16890 204 aaPredicted RBP-3.62□□□□□ -2.99
RNU6-539P-201ENST00000516665 SYT6Q5T7P8 510 aaPredicted RBP-3.62□□□□□ -2.99
RNU6-539P-201ENST00000516665 PLCZ1Q86YW0 608 aa-3.62□□□□□ -2.99
RNU6-539P-201ENST00000516665 OR4A4PQ8NGN8 299 aa-3.62□□□□□ -2.99
RNU6-539P-201ENST00000516665 ABHD14BQ96IU4 210 aa-3.62□□□□□ -2.99
RNU6-539P-201ENST00000516665 COA1Q9GZY4 146 aa-3.62□□□□□ -2.99
RNU6-539P-201ENST00000516665 C2orf40Q9H1Z8 148 aa-3.62□□□□□ -2.99
RNU6-539P-201ENST00000516665 KALRNO60229 2985 aa-3.62□□□□□ -2.99
RNU6-539P-201ENST00000516665 DNMT1P26358 1616 aaKnown RBP-3.62□□□□□ -2.99
RNU6-539P-201ENST00000516665 NBEAQ8NFP9 2946 aa-3.63□□□□□ -2.99
RNU6-539P-201ENST00000516665 RFXANKO14593 260 aa-3.63□□□□□ -2.99
RNU6-539P-201ENST00000516665 STK16O75716 305 aa-3.63□□□□□ -2.99
RNU6-539P-201ENST00000516665 HAND1O96004 215 aa-3.63□□□□□ -2.99
RNU6-539P-201ENST00000516665 AK1P00568 194 aa-3.63□□□□□ -2.99
RNU6-539P-201ENST00000516665 MGST1P10620 155 aaKnown RBP-3.63□□□□□ -2.99
RNU6-539P-201ENST00000516665 ZNF24P17028 368 aa-3.63□□□□□ -2.99
RNU6-539P-201ENST00000516665 NFYAP23511 347 aaPredicted RBP-3.63□□□□□ -2.99
RNU6-539P-201ENST00000516665 CASP1P29466 404 aa-3.63□□□□□ -2.99
RNU6-539P-201ENST00000516665 PSMB3P49720 205 aa-3.63□□□□□ -2.99
RNU6-539P-201ENST00000516665 RPL37AP61513 92 aaKnown RBP-3.63□□□□□ -2.99
RNU6-539P-201ENST00000516665 NUCB1Q02818 461 aa-3.63□□□□□ -2.99
RNU6-539P-201ENST00000516665 SPAG1Q07617 926 aa-3.63□□□□□ -2.99
RNU6-539P-201ENST00000516665 C2orf76Q3KRA6 126 aa-3.63□□□□□ -2.99
RNU6-539P-201ENST00000516665 GAPTQ8N292 157 aa-3.63□□□□□ -2.99
RNU6-539P-201ENST00000516665 Q8N402 240 aa-3.63□□□□□ -2.99
RNU6-539P-201ENST00000516665 TMEM75Q8N9X5 138 aa-3.63□□□□□ -2.99
RNU6-539P-201ENST00000516665 OR5D18Q8NGL1 313 aa-3.63□□□□□ -2.99
RNU6-539P-201ENST00000516665 C11orf40Q8WZ69 217 aa-3.63□□□□□ -2.99
RNU6-539P-201ENST00000516665 SLC38A4Q969I6 547 aa-3.63□□□□□ -2.99
RNU6-539P-201ENST00000516665 LINC00208Q96KT6 92 aa-3.63□□□□□ -2.99
RNU6-539P-201ENST00000516665 ULBP3Q9BZM4 244 aa-3.63□□□□□ -2.99
RNU6-539P-201ENST00000516665 COQ10BQ9H8M1 238 aa-3.63□□□□□ -2.99
RNU6-539P-201ENST00000516665 MCUBQ9NWR8 336 aa-3.63□□□□□ -2.99
RNU6-539P-201ENST00000516665 MAP2P11137 1827 aaKnown RBP-3.63□□□□□ -2.99
RNU6-539P-201ENST00000516665 DMXL1Q9Y485 3027 aa-3.63□□□□□ -2.99
RNU6-539P-201ENST00000516665 C8orf87E5RJ46 101 aa-3.64□□□□□ -2.99
RNU6-539P-201ENST00000516665 F8W1H4 67 aa-3.64□□□□□ -2.99
RNU6-539P-201ENST00000516665 K7ERQ8 282 aa-3.64□□□□□ -2.99
RNU6-539P-201ENST00000516665 DFFAO00273 331 aa-3.64□□□□□ -2.99
RNU6-539P-201ENST00000516665 IL6P05231 212 aa-3.64□□□□□ -2.99
RNU6-539P-201ENST00000516665 HTR1AP08908 422 aa-3.64□□□□□ -2.99
RNU6-539P-201ENST00000516665 GIMD1P0DJR0 217 aa-3.64□□□□□ -2.99
RNU6-539P-201ENST00000516665 ATP5DP30049 168 aa-3.64□□□□□ -2.99
RNU6-539P-201ENST00000516665 TNNT3P45378 269 aaPredicted RBP-3.64□□□□□ -2.99
RNU6-539P-201ENST00000516665 EIF2B2P49770 351 aaKnown RBP-3.64□□□□□ -2.99
RNU6-539P-201ENST00000516665 RAB10P61026 200 aa-3.64□□□□□ -2.99
RNU6-539P-201ENST00000516665 TBPL1P62380 186 aa-3.64□□□□□ -2.99
RNU6-539P-201ENST00000516665 SLC8B1Q6J4K2 584 aa-3.64□□□□□ -2.99
RNU6-539P-201ENST00000516665 CERS3Q8IU89 383 aa-3.64□□□□□ -2.99
RNU6-539P-201ENST00000516665 TTC29Q8NA56 475 aaPredicted RBP-3.64□□□□□ -2.99
RNU6-539P-201ENST00000516665 OR10J5Q8NHC4 309 aa-3.64□□□□□ -2.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms