RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 A0A1W2PRF3 423 aa6.17□□□□□ -1.42
SCARNA20.1-201ENST00000516009 A0A1W2PRM7 423 aa6.17□□□□□ -1.42
SCARNA20.1-201ENST00000516009 OOSP1A8MZH6 123 aa6.17□□□□□ -1.42
SCARNA20.1-201ENST00000516009 H3BP45 60 aa6.17□□□□□ -1.42
SCARNA20.1-201ENST00000516009 UPK2O00526 184 aa6.17□□□□□ -1.42
SCARNA20.1-201ENST00000516009 LY86O95711 162 aa6.17□□□□□ -1.42
SCARNA20.1-201ENST00000516009 TMEM50AO95807 157 aa6.17□□□□□ -1.42
SCARNA20.1-201ENST00000516009 CFDP00746 253 aaPredicted RBP6.17□□□□□ -1.42
SCARNA20.1-201ENST00000516009 MSMBP08118 114 aa6.17□□□□□ -1.42
SCARNA20.1-201ENST00000516009 SAA1P0DJI8 122 aaPredicted RBP6.17□□□□□ -1.42
SCARNA20.1-201ENST00000516009 TPT1P13693 172 aaKnown RBP6.17□□□□□ -1.42
SCARNA20.1-201ENST00000516009 LGALS7P47929 136 aa6.17□□□□□ -1.42
SCARNA20.1-201ENST00000516009 UBE2E1P51965 193 aa6.17□□□□□ -1.42
SCARNA20.1-201ENST00000516009 SPCS3P61009 180 aa6.17□□□□□ -1.42
SCARNA20.1-201ENST00000516009 NHLH2Q02577 135 aa6.17□□□□□ -1.42
SCARNA20.1-201ENST00000516009 PAX8Q06710 450 aa6.17□□□□□ -1.42
SCARNA20.1-201ENST00000516009 BAXQ07812 192 aa6.17□□□□□ -1.42
SCARNA20.1-201ENST00000516009 EXOSC2Q13868 293 aaKnown RBP6.17□□□□□ -1.42
SCARNA20.1-201ENST00000516009 CCDC144NLQ6NUI1 221 aa6.17□□□□□ -1.42
SCARNA20.1-201ENST00000516009 CLEC9AQ6UXN8 241 aa6.17□□□□□ -1.42
SCARNA20.1-201ENST00000516009 PDZD9Q8IXQ8 264 aa6.17□□□□□ -1.42
SCARNA20.1-201ENST00000516009 OR52E5Q8NH55 327 aa6.17□□□□□ -1.42
SCARNA20.1-201ENST00000516009 DTD1Q8TEA8 209 aa6.17□□□□□ -1.42
SCARNA20.1-201ENST00000516009 SCARB1Q8WTV0 552 aa6.17□□□□□ -1.42
SCARNA20.1-201ENST00000516009 RBMXL1Q96E39 390 aaKnown RBP6.17□□□□□ -1.42
SCARNA20.1-201ENST00000516009 TSNAXQ99598 290 aaKnown RBP6.17□□□□□ -1.42
SCARNA20.1-201ENST00000516009 CYTL1Q9NRR1 136 aa6.17□□□□□ -1.42
SCARNA20.1-201ENST00000516009 FKBP11Q9NYL4 201 aa6.17□□□□□ -1.42
SCARNA20.1-201ENST00000516009 UBQLN2Q9UHD9 624 aa6.17□□□□□ -1.42
SCARNA20.1-201ENST00000516009 PRNDQ9UKY0 176 aa6.17□□□□□ -1.42
SCARNA20.1-201ENST00000516009 FOXA2Q9Y261 457 aaPredicted RBP6.17□□□□□ -1.42
SCARNA20.1-201ENST00000516009 TBL2Q9Y4P3 447 aaKnown RBP6.17□□□□□ -1.42
SCARNA20.1-201ENST00000516009 HILPDAQ9Y5L2 63 aa6.17□□□□□ -1.42
SCARNA20.1-201ENST00000516009 ABCA12Q86UK0 2595 aa6.17□□□□□ -1.42
SCARNA20.1-201ENST00000516009 POLQO75417 2590 aa6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 TNCP24821 2201 aa6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 BORCS7-ASMTA0A0B4J1R7 106 aa6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 TRAV20A0A0B4J274 112 aa6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 SRRM4A7MD48 611 aaKnown RBP6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 B4DSR2 109 aa6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 TIMM23O14925 209 aa6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 JTBO76095 146 aa6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 CST7O76096 145 aa6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 KBTBD11O94819 623 aa6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 IL6RP08887 468 aaPredicted RBP6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 FGF2P09038 288 aa6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 SULT1A1P50225 295 aa6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 DYNLT3P51808 116 aa6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 HSPE1P61604 102 aaKnown RBP6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 TMEM267Q0VDI3 215 aaPredicted RBP6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 VMA21Q3ZAQ7 101 aa6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 PDLIM3Q53GG5 364 aaPredicted RBP6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 SPINK9Q5DT21 86 aa6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 SPANXN5Q5MJ07 72 aa6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 Q5PR19 223 aa6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 LDLRAD2Q5SZI1 272 aa6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 RPL7L1Q6DKI1 246 aaKnown RBP6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 HIST2H2BCQ6DN03 193 aa6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 ALKAL2Q6UX46 152 aa6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 LHFPL4Q7Z7J7 247 aa6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 BAP18Q8IXM2 172 aa6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 PUSL1Q8N0Z8 303 aaKnown RBP6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 OR1S2Q8NGQ3 325 aa6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 OR5C1Q8NGR4 320 aa6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 OR4A5Q8NH83 315 aa6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 STOML3Q8TAV4 291 aa6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 TMEM167AQ8TBQ9 72 aa6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 ZDHHC16Q969W1 377 aa6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 MBD6Q96DN6 1003 aa6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 PHYHIPLQ96FC7 376 aa6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 BSCL2Q96G97 398 aaPredicted RBP6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 RNF5Q99942 180 aa6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 HIPK2Q9H2X6 1198 aa6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 HEYLQ9NQ87 328 aaPredicted RBP6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 TMEM14BQ9NUH8 114 aa6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 ITGB1BP2Q9UKP3 347 aa6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 TCF19Q9Y242 345 aa6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 ZNF257Q9Y2Q1 563 aa6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 STRAPQ9Y3F4 350 aaKnown RBP6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 OR51B2Q9Y5P1 312 aa6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 APCP25054 2843 aa6.16□□□□□ -1.42
SCARNA20.1-201ENST00000516009 GCN1Q92616 2671 aaKnown RBP6.15□□□□□ -1.42
SCARNA20.1-201ENST00000516009 CR1P17927 2039 aa6.15□□□□□ -1.42
SCARNA20.1-201ENST00000516009 NPFFO15130 113 aa6.15□□□□□ -1.42
SCARNA20.1-201ENST00000516009 SLC25A17O43808 307 aa6.15□□□□□ -1.42
SCARNA20.1-201ENST00000516009 SCAF4O95104 1147 aaKnown RBP6.15□□□□□ -1.42
SCARNA20.1-201ENST00000516009 IGLV2-23P01705 113 aa6.15□□□□□ -1.42
SCARNA20.1-201ENST00000516009 METTL15P1P0C7V9 234 aa6.15□□□□□ -1.42
SCARNA20.1-201ENST00000516009 CD1BP29016 333 aa6.15□□□□□ -1.42
SCARNA20.1-201ENST00000516009 HOXA1P49639 335 aaPredicted RBP6.15□□□□□ -1.42
SCARNA20.1-201ENST00000516009 RAB14P61106 215 aa6.15□□□□□ -1.42
SCARNA20.1-201ENST00000516009 RPL8P62917 257 aaKnown RBP6.15□□□□□ -1.42
SCARNA20.1-201ENST00000516009 HBG1P69891 147 aa6.15□□□□□ -1.42
SCARNA20.1-201ENST00000516009 HBG2P69892 147 aa6.15□□□□□ -1.42
SCARNA20.1-201ENST00000516009 RPP30P78346 268 aaKnown RBP6.15□□□□□ -1.42
SCARNA20.1-201ENST00000516009 LOXL1Q08397 574 aaPredicted RBP6.15□□□□□ -1.42
SCARNA20.1-201ENST00000516009 HABP2Q14520 560 aaPredicted RBP6.15□□□□□ -1.42
SCARNA20.1-201ENST00000516009 ZNF266Q14584 549 aa6.15□□□□□ -1.42
SCARNA20.1-201ENST00000516009 CLINT1Q14677 625 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms