RNA–Protein interactions for RNA: ENST00000515752.5

SDHA-218, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 1,809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-218ENST00000515752 CLRN3Q8NCR9 226 aa12.49□□□□□ -0.41
SDHA-218ENST00000515752 OR5AN1Q8NGI8 311 aa12.49□□□□□ -0.41
SDHA-218ENST00000515752 PCGF1Q9BSM1 259 aa12.49□□□□□ -0.41
SDHA-218ENST00000515752 BET1LQ9NYM9 111 aa12.49□□□□□ -0.41
SDHA-218ENST00000515752 MED19A0JLT2 244 aaPredicted RBP12.48□□□□□ -0.41
SDHA-218ENST00000515752 AGAP20933 346 aa12.48□□□□□ -0.41
SDHA-218ENST00000515752 MDKP21741 143 aaPredicted RBP12.48□□□□□ -0.41
SDHA-218ENST00000515752 CD1BP29016 333 aa12.48□□□□□ -0.41
SDHA-218ENST00000515752 ETV3LQ6ZN32 361 aa12.48□□□□□ -0.41
SDHA-218ENST00000515752 NEU4Q8WWR8 484 aaPredicted RBP12.48□□□□□ -0.41
SDHA-218ENST00000515752 hCG_1809904A0A1W2PP81 198 aa12.48□□□□□ -0.41
SDHA-218ENST00000515752 A0A1W2PPE2 198 aa12.48□□□□□ -0.41
SDHA-218ENST00000515752 A0A1W2PR64 198 aa12.48□□□□□ -0.41
SDHA-218ENST00000515752 A0A1W2PRV1 198 aa12.48□□□□□ -0.41
SDHA-218ENST00000515752 UPK2O00526 184 aa12.48□□□□□ -0.41
SDHA-218ENST00000515752 IGHV2-70P01814 119 aa12.48□□□□□ -0.41
SDHA-218ENST00000515752 IGHV1-8P0DP01 117 aa12.48□□□□□ -0.41
SDHA-218ENST00000515752 TAGLN2P37802 199 aaKnown RBP12.48□□□□□ -0.41
SDHA-218ENST00000515752 RAB13P51153 203 aa12.48□□□□□ -0.41
SDHA-218ENST00000515752 CCL20P78556 96 aa12.48□□□□□ -0.41
SDHA-218ENST00000515752 DLK1P80370 383 aa12.48□□□□□ -0.41
SDHA-218ENST00000515752 SPINK9Q5DT21 86 aa12.48□□□□□ -0.41
SDHA-218ENST00000515752 SOHLH1Q5JUK2 328 aa12.48□□□□□ -0.41
SDHA-218ENST00000515752 PDPNQ86YL7 162 aa12.48□□□□□ -0.41
SDHA-218ENST00000515752 OR10G4Q8NGN3 311 aa12.48□□□□□ -0.41
SDHA-218ENST00000515752 OR4C13Q8NGP0 309 aa12.48□□□□□ -0.41
SDHA-218ENST00000515752 OR5B3Q8NH48 314 aa12.48□□□□□ -0.41
SDHA-218ENST00000515752 CLDND2Q8NHS1 167 aa12.48□□□□□ -0.41
SDHA-218ENST00000515752 VSTM2AQ8TAG5 236 aa12.48□□□□□ -0.41
SDHA-218ENST00000515752 TIMD4Q96H15 378 aa12.48□□□□□ -0.41
SDHA-218ENST00000515752 RCC1LQ96I51 464 aaKnown RBP12.48□□□□□ -0.41
SDHA-218ENST00000515752 NPCDR1Q9BY65 106 aa12.48□□□□□ -0.41
SDHA-218ENST00000515752 MIOXQ9UGB7 285 aa12.48□□□□□ -0.41
SDHA-218ENST00000515752 SPTBN4Q9H254 2564 aa12.47□□□□□ -0.41
SDHA-218ENST00000515752 TRAV3A0A0B4J244 114 aa12.47□□□□□ -0.41
SDHA-218ENST00000515752 A0A1B0GV50 99 aa12.47□□□□□ -0.41
SDHA-218ENST00000515752 H0YJW9 148 aa12.47□□□□□ -0.41
SDHA-218ENST00000515752 IFNA1P01562 189 aa12.47□□□□□ -0.41
SDHA-218ENST00000515752 COL8A2P25067 703 aa12.47□□□□□ -0.41
SDHA-218ENST00000515752 MC5RP33032 325 aa12.47□□□□□ -0.41
SDHA-218ENST00000515752 CDSNQ15517 529 aa12.47□□□□□ -0.41
SDHA-218ENST00000515752 TMEM177Q53S58 311 aa12.47□□□□□ -0.41
SDHA-218ENST00000515752 ZNF787Q6DD87 383 aa12.47□□□□□ -0.41
SDHA-218ENST00000515752 OR4A5Q8NH83 315 aa12.47□□□□□ -0.41
SDHA-218ENST00000515752 C17orf50Q8WW18 174 aa12.47□□□□□ -0.41
SDHA-218ENST00000515752 LHX4Q969G2 390 aa12.47□□□□□ -0.41
SDHA-218ENST00000515752 FLYWCH2Q96CP2 140 aaKnown RBP12.47□□□□□ -0.41
SDHA-218ENST00000515752 KCNIP2Q9NS61 270 aa12.47□□□□□ -0.41
SDHA-218ENST00000515752 SLC39A9Q9NUM3 307 aa12.47□□□□□ -0.41
SDHA-218ENST00000515752 WDR83OSQ9Y284 106 aa12.47□□□□□ -0.41
SDHA-218ENST00000515752 OR51B2Q9Y5P1 312 aa12.47□□□□□ -0.41
SDHA-218ENST00000515752 FNDC10F2Z333 226 aa12.46□□□□□ -0.41
SDHA-218ENST00000515752 H7C2Y5 167 aa12.46□□□□□ -0.41
SDHA-218ENST00000515752 KBTBD11O94819 623 aa12.46□□□□□ -0.41
SDHA-218ENST00000515752 PRRX1P54821 245 aa12.46□□□□□ -0.41
SDHA-218ENST00000515752 C4orf17Q53FE4 359 aa12.46□□□□□ -0.41
SDHA-218ENST00000515752 ABHD12Q8N2K0 398 aa12.46□□□□□ -0.41
SDHA-218ENST00000515752 RAB1CQ92928 201 aa12.46□□□□□ -0.41
SDHA-218ENST00000515752 NEIL1Q96FI4 390 aaPredicted RBP12.46□□□□□ -0.41
SDHA-218ENST00000515752 MRPL20Q9BYC9 149 aaKnown RBP12.46□□□□□ -0.41
SDHA-218ENST00000515752 TMEM133Q9H2Q1 129 aa12.46□□□□□ -0.41
SDHA-218ENST00000515752 FAM74A7A6NL05 159 aa12.46□□□□□ -0.42
SDHA-218ENST00000515752 CYB5BO43169 146 aa12.46□□□□□ -0.42
SDHA-218ENST00000515752 IGKV1-16P04430 117 aa12.46□□□□□ -0.42
SDHA-218ENST00000515752 IFNA4P05014 189 aa12.46□□□□□ -0.42
SDHA-218ENST00000515752 NPBWR1P48145 328 aa12.46□□□□□ -0.42
SDHA-218ENST00000515752 PRCDQ00LT1 54 aa12.46□□□□□ -0.42
SDHA-218ENST00000515752 ACOT6Q3I5F7 207 aaPredicted RBP12.46□□□□□ -0.42
SDHA-218ENST00000515752 FAM74A3Q4VXF1 159 aa12.46□□□□□ -0.42
SDHA-218ENST00000515752 RBMS3Q6XE24 437 aaKnown RBP12.46□□□□□ -0.42
SDHA-218ENST00000515752 SLC24A4Q8NFF2 622 aa12.46□□□□□ -0.42
SDHA-218ENST00000515752 OR8B3Q8NGG8 313 aa12.46□□□□□ -0.42
SDHA-218ENST00000515752 C8orf46Q8TAG6 207 aa12.46□□□□□ -0.42
SDHA-218ENST00000515752 ST6GALNAC6Q969X2 333 aa12.46□□□□□ -0.42
SDHA-218ENST00000515752 OR8B2Q96RD0 313 aa12.46□□□□□ -0.42
SDHA-218ENST00000515752 RARRES2Q99969 163 aa12.46□□□□□ -0.42
SDHA-218ENST00000515752 ACTR3CQ9C0K3 210 aaPredicted RBP12.46□□□□□ -0.42
SDHA-218ENST00000515752 PLEKHA3Q9HB20 300 aa12.46□□□□□ -0.42
SDHA-218ENST00000515752 ROS1P08922 2347 aa12.46□□□□□ -0.42
SDHA-218ENST00000515752 CTXND1A0A1B0GTU2 59 aa12.45□□□□□ -0.42
SDHA-218ENST00000515752 MAP1LC3B2A6NCE7 125 aa12.45□□□□□ -0.42
SDHA-218ENST00000515752 NUPL2O15504 423 aaKnown RBP12.45□□□□□ -0.42
SDHA-218ENST00000515752 NDUFS6O75380 124 aaKnown RBP12.45□□□□□ -0.42
SDHA-218ENST00000515752 F12P00748 615 aaPredicted RBP12.45□□□□□ -0.42
SDHA-218ENST00000515752 USF1P22415 310 aaPredicted RBP12.45□□□□□ -0.42
SDHA-218ENST00000515752 NPY1RP25929 384 aa12.45□□□□□ -0.42
SDHA-218ENST00000515752 ELLP55199 621 aaPredicted RBP12.45□□□□□ -0.42
SDHA-218ENST00000515752 ERVFRD-1P60508 538 aa12.45□□□□□ -0.42
SDHA-218ENST00000515752 HAGHQ16775 308 aa12.45□□□□□ -0.42
SDHA-218ENST00000515752 ZNF841Q6ZN19 808 aa12.45□□□□□ -0.42
SDHA-218ENST00000515752 TGIF2LXQ8IUE1 241 aa12.45□□□□□ -0.42
SDHA-218ENST00000515752 HARBI1Q96MB7 349 aa12.45□□□□□ -0.42
SDHA-218ENST00000515752 P2RX4Q99571 388 aa12.45□□□□□ -0.42
SDHA-218ENST00000515752 MAP1LC3BQ9GZQ8 125 aa12.45□□□□□ -0.42
SDHA-218ENST00000515752 VSIRQ9H7M9 311 aa12.45□□□□□ -0.42
SDHA-218ENST00000515752 SMCO4Q9NRQ5 59 aa12.45□□□□□ -0.42
SDHA-218ENST00000515752 WASHC3Q9Y3C0 194 aa12.45□□□□□ -0.42
SDHA-218ENST00000515752 ANKHD1Q8IWZ3 2542 aaKnown RBP12.45□□□□□ -0.42
SDHA-218ENST00000515752 SRP19P09132 144 aaKnown RBP12.44□□□□□ -0.42
SDHA-218ENST00000515752 ICAM4Q14773 271 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms