RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, human

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM3-222	ENST00000515609	REG1B	P48304	166 aa		7.69	□□□□□ -1.18
TPM3-222	ENST00000515609	COMP	P49747	757 aa	Predicted RBP	7.69	□□□□□ -1.18
TPM3-222	ENST00000515609	SUB1	P53999	127 aa	Known RBP eCLIP	7.69	□□□□□ -1.18
TPM3-222	ENST00000515609	RELB	Q01201	579 aa		7.69	□□□□□ -1.18
TPM3-222	ENST00000515609	SSX9	Q7RTT3	188 aa		7.69	□□□□□ -1.18
TPM3-222	ENST00000515609	BAP18	Q8IXM2	172 aa		7.69	□□□□□ -1.18
TPM3-222	ENST00000515609	PUSL1	Q8N0Z8	303 aa	Known RBP	7.69	□□□□□ -1.18
TPM3-222	ENST00000515609	TMEM252	Q8N6L7	170 aa		7.69	□□□□□ -1.18
TPM3-222	ENST00000515609	UBAC2	Q8NBM4	344 aa		7.69	□□□□□ -1.18
TPM3-222	ENST00000515609	ZNF680	Q8NEM1	530 aa		7.69	□□□□□ -1.18
TPM3-222	ENST00000515609	OR1L8	Q8NGR8	309 aa		7.69	□□□□□ -1.18
TPM3-222	ENST00000515609	OR2T10	Q8NGZ9	312 aa		7.69	□□□□□ -1.18
TPM3-222	ENST00000515609	TMEM167A	Q8TBQ9	72 aa		7.69	□□□□□ -1.18
TPM3-222	ENST00000515609	SCARB1	Q8WTV0	552 aa		7.69	□□□□□ -1.18
TPM3-222	ENST00000515609	GNPNAT1	Q96EK6	184 aa	Predicted RBP	7.69	□□□□□ -1.18
TPM3-222	ENST00000515609	MAGT1	Q9H0U3	335 aa		7.69	□□□□□ -1.18
TPM3-222	ENST00000515609	PLEKHA3	Q9HB20	300 aa		7.69	□□□□□ -1.18
TPM3-222	ENST00000515609	HEYL	Q9NQ87	328 aa	Predicted RBP	7.69	□□□□□ -1.18
TPM3-222	ENST00000515609	PLSCR3	Q9NRY6	295 aa		7.69	□□□□□ -1.18
TPM3-222	ENST00000515609	TMEM14B	Q9NUH8	114 aa		7.69	□□□□□ -1.18
TPM3-222	ENST00000515609	BOLA1	Q9Y3E2	137 aa		7.69	□□□□□ -1.18
TPM3-222	ENST00000515609	AUP1	Q9Y679	476 aa		7.69	□□□□□ -1.18
TPM3-222	ENST00000515609	USP9X	Q93008	2570 aa	Predicted RBP	7.68	□□□□□ -1.18
TPM3-222	ENST00000515609	USF3	Q68DE3	2245 aa		7.68	□□□□□ -1.18
TPM3-222	ENST00000515609	CYB5B	O43169	146 aa		7.68	□□□□□ -1.18
TPM3-222	ENST00000515609	SOX15	O60248	233 aa		7.68	□□□□□ -1.18
TPM3-222	ENST00000515609	MOS	P00540	346 aa		7.68	□□□□□ -1.18
TPM3-222	ENST00000515609	SNRNP70	P08621	437 aa	Known RBP	7.68	□□□□□ -1.18
TPM3-222	ENST00000515609	SAA1	P0DJI8	122 aa	Predicted RBP	7.68	□□□□□ -1.18
TPM3-222	ENST00000515609	HOXB4	P17483	251 aa	Predicted RBP	7.68	□□□□□ -1.18
TPM3-222	ENST00000515609	SNCA	P37840	140 aa		7.68	□□□□□ -1.18
TPM3-222	ENST00000515609	HOXA1	P49639	335 aa	Predicted RBP	7.68	□□□□□ -1.18
TPM3-222	ENST00000515609	ERH	P84090	104 aa	Known RBP	7.68	□□□□□ -1.18
TPM3-222	ENST00000515609	EWSR1	Q01844	656 aa	Known RBP eCLIP	7.68	□□□□□ -1.18
TPM3-222	ENST00000515609	HABP2	Q14520	560 aa	Predicted RBP	7.68	□□□□□ -1.18
TPM3-222	ENST00000515609	SLC25A24	Q6NUK1	477 aa		7.68	□□□□□ -1.18
TPM3-222	ENST00000515609		Q6ZRM9	215 aa		7.68	□□□□□ -1.18
TPM3-222	ENST00000515609	THNSL2	Q86YJ6	484 aa		7.68	□□□□□ -1.18
TPM3-222	ENST00000515609	STPG2	Q8N412	459 aa		7.68	□□□□□ -1.18
TPM3-222	ENST00000515609	OR10P1	Q8NGE3	313 aa		7.68	□□□□□ -1.18
TPM3-222	ENST00000515609	ST8SIA2	Q92186	375 aa		7.68	□□□□□ -1.18
TPM3-222	ENST00000515609	SRSF8	Q9BRL6	282 aa	Known RBP	7.68	□□□□□ -1.18
TPM3-222	ENST00000515609	GGACT	Q9BVM4	153 aa		7.68	□□□□□ -1.18
TPM3-222	ENST00000515609	RBKS	Q9H477	322 aa		7.68	□□□□□ -1.18
TPM3-222	ENST00000515609	OR51B2	Q9Y5P1	312 aa		7.68	□□□□□ -1.18
TPM3-222	ENST00000515609	SPTAN1	Q13813	2472 aa	Known RBP	7.67	□□□□□ -1.18
TPM3-222	ENST00000515609	FAM157A	C9JC47	383 aa		7.67	□□□□□ -1.18
TPM3-222	ENST00000515609	INS-IGF2	F8WCM5	200 aa		7.67	□□□□□ -1.18
TPM3-222	ENST00000515609	RNASEK-C17orf49	H0YIS7	233 aa		7.67	□□□□□ -1.18
TPM3-222	ENST00000515609	NPFF	O15130	113 aa		7.67	□□□□□ -1.18
TPM3-222	ENST00000515609	IFNA10	P01566	189 aa		7.67	□□□□□ -1.18
TPM3-222	ENST00000515609	IGKV1-16	P04430	117 aa		7.67	□□□□□ -1.18
TPM3-222	ENST00000515609	IL6R	P08887	468 aa	Predicted RBP	7.67	□□□□□ -1.18
TPM3-222	ENST00000515609	OR8U8	P0C7N1	319 aa		7.67	□□□□□ -1.18
TPM3-222	ENST00000515609	COL8A1	P27658	744 aa		7.67	□□□□□ -1.18
TPM3-222	ENST00000515609	HTR2B	P41595	481 aa		7.67	□□□□□ -1.18
TPM3-222	ENST00000515609	RAB5C	P51148	216 aa		7.67	□□□□□ -1.18
TPM3-222	ENST00000515609	PLGLA	Q15195	96 aa		7.67	□□□□□ -1.18
TPM3-222	ENST00000515609	SPANXN5	Q5MJ07	72 aa		7.67	□□□□□ -1.18
TPM3-222	ENST00000515609		Q5PR19	223 aa		7.67	□□□□□ -1.18
TPM3-222	ENST00000515609	LILRB2	Q8N423	598 aa		7.67	□□□□□ -1.18
TPM3-222	ENST00000515609	SCGB1C1	Q8TD33	95 aa		7.67	□□□□□ -1.18
TPM3-222	ENST00000515609	REG4	Q9BYZ8	158 aa		7.67	□□□□□ -1.18
TPM3-222	ENST00000515609	SLC25A32	Q9H2D1	315 aa		7.67	□□□□□ -1.18
TPM3-222	ENST00000515609	C11orf1	Q9H5F2	150 aa		7.67	□□□□□ -1.18
TPM3-222	ENST00000515609	C7orf69	Q9H7B7	122 aa		7.67	□□□□□ -1.18
TPM3-222	ENST00000515609	MMP26	Q9NRE1	261 aa		7.67	□□□□□ -1.18
TPM3-222	ENST00000515609	FBXL17	Q9UF56	701 aa		7.67	□□□□□ -1.18
TPM3-222	ENST00000515609	TCF19	Q9Y242	345 aa		7.67	□□□□□ -1.18
TPM3-222	ENST00000515609	FAM96B	Q9Y3D0	163 aa		7.67	□□□□□ -1.18
TPM3-222	ENST00000515609	IGHV1-69D	A0A0B4J2H0	117 aa		7.66	□□□□□ -1.18
TPM3-222	ENST00000515609		A0A1W2PPI3	338 aa		7.66	□□□□□ -1.18
TPM3-222	ENST00000515609	FAM24A	A6NFZ4	105 aa		7.66	□□□□□ -1.18
TPM3-222	ENST00000515609	TIMM23	O14925	209 aa		7.66	□□□□□ -1.18
TPM3-222	ENST00000515609	IGHV1-69	P01742	117 aa		7.66	□□□□□ -1.18
TPM3-222	ENST00000515609	OR9G9	P0C7N8	305 aa		7.66	□□□□□ -1.18
TPM3-222	ENST00000515609	SEC11B	P0C7V7	166 aa		7.66	□□□□□ -1.18
TPM3-222	ENST00000515609	LINC00205	P59089	165 aa		7.66	□□□□□ -1.18
TPM3-222	ENST00000515609	PRCD	Q00LT1	54 aa		7.66	□□□□□ -1.18
TPM3-222	ENST00000515609	HES1	Q14469	280 aa		7.66	□□□□□ -1.18
TPM3-222	ENST00000515609	SSX2	Q16385	188 aa		7.66	□□□□□ -1.18
TPM3-222	ENST00000515609	IZUMO4	Q1ZYL8	232 aa		7.66	□□□□□ -1.18
TPM3-222	ENST00000515609	UTF1	Q5T230	341 aa		7.66	□□□□□ -1.18
TPM3-222	ENST00000515609	C1orf229	Q6ZS94	237 aa	Predicted RBP	7.66	□□□□□ -1.18
TPM3-222	ENST00000515609	PPP1R27	Q86WC6	154 aa		7.66	□□□□□ -1.18
TPM3-222	ENST00000515609	VKORC1L1	Q8N0U8	176 aa		7.66	□□□□□ -1.18
TPM3-222	ENST00000515609	OR1L6	Q8NGR2	347 aa		7.66	□□□□□ -1.18
TPM3-222	ENST00000515609	OR5C1	Q8NGR4	320 aa		7.66	□□□□□ -1.18
TPM3-222	ENST00000515609	RNF141	Q8WVD5	230 aa		7.66	□□□□□ -1.18
TPM3-222	ENST00000515609	TBX15	Q96SF7	602 aa		7.66	□□□□□ -1.18
TPM3-222	ENST00000515609	ATP5S	Q99766	215 aa		7.66	□□□□□ -1.18
TPM3-222	ENST00000515609	QTRT1	Q9BXR0	403 aa	Known RBP	7.66	□□□□□ -1.18
TPM3-222	ENST00000515609	KCNIP2	Q9NS61	270 aa		7.66	□□□□□ -1.18
TPM3-222	ENST00000515609	HIF1AN	Q9NWT6	349 aa		7.66	□□□□□ -1.18
TPM3-222	ENST00000515609	HILPDA	Q9Y5L2	63 aa		7.66	□□□□□ -1.18
TPM3-222	ENST00000515609	FLNC	Q14315	2725 aa		7.65	□□□□□ -1.18
TPM3-222	ENST00000515609	MSGN1	A6NI15	193 aa		7.65	□□□□□ -1.18
TPM3-222	ENST00000515609	UMAD1	C9J7I0	102 aa		7.65	□□□□□ -1.18
TPM3-222	ENST00000515609	FNDC10	F2Z333	226 aa		7.65	□□□□□ -1.18
TPM3-222	ENST00000515609	CORT	O00230	105 aa		7.65	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms