RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 G6PCP35575 357 aa7.73□□□□□ -1.17
TOPBP1-209ENST00000513818 UBE2KP61086 200 aa7.73□□□□□ -1.17
TOPBP1-209ENST00000513818 RND3P61587 244 aa7.73□□□□□ -1.17
TOPBP1-209ENST00000513818 ECSCRQ19T08 205 aa7.73□□□□□ -1.17
TOPBP1-209ENST00000513818 MRGPRG-AS1Q2M3A8 158 aa7.73□□□□□ -1.17
TOPBP1-209ENST00000513818 VMA21Q3ZAQ7 101 aa7.73□□□□□ -1.17
TOPBP1-209ENST00000513818 ANKRD39Q53RE8 183 aa7.73□□□□□ -1.17
TOPBP1-209ENST00000513818 LIN54Q6MZP7 749 aa7.73□□□□□ -1.17
TOPBP1-209ENST00000513818 ZNF329Q86UD4 541 aa7.73□□□□□ -1.17
TOPBP1-209ENST00000513818 CCDC71LQ8N9Z2 235 aa7.73□□□□□ -1.17
TOPBP1-209ENST00000513818 POC5Q8NA72 575 aa7.73□□□□□ -1.17
TOPBP1-209ENST00000513818 GRPEL2Q8TAA5 225 aa7.73□□□□□ -1.17
TOPBP1-209ENST00000513818 OSR1Q8TAX0 266 aaPredicted RBP7.73□□□□□ -1.17
TOPBP1-209ENST00000513818 ZFAND1Q8TCF1 268 aa7.73□□□□□ -1.17
TOPBP1-209ENST00000513818 R3HDM4Q96D70 268 aa7.73□□□□□ -1.17
TOPBP1-209ENST00000513818 ZNF486Q96H40 463 aaPredicted RBP7.73□□□□□ -1.17
TOPBP1-209ENST00000513818 NAA60Q9H7X0 242 aa7.73□□□□□ -1.17
TOPBP1-209ENST00000513818 GPR132Q9UNW8 380 aa7.73□□□□□ -1.17
TOPBP1-209ENST00000513818 WSB1Q9Y6I7 421 aa7.73□□□□□ -1.17
TOPBP1-209ENST00000513818 STAB1Q9NY15 2570 aa7.73□□□□□ -1.17
TOPBP1-209ENST00000513818 PLXNB1O43157 2135 aa7.73□□□□□ -1.17
TOPBP1-209ENST00000513818 TEX13DA0A0J9YY54 714 aaPredicted RBP7.72□□□□□ -1.17
TOPBP1-209ENST00000513818 C3orf85A0A1B0GTC6 90 aa7.72□□□□□ -1.17
TOPBP1-209ENST00000513818 G3V318 75 aa7.72□□□□□ -1.17
TOPBP1-209ENST00000513818 H0Y980 276 aa7.72□□□□□ -1.17
TOPBP1-209ENST00000513818 RBFOX2O43251 390 aaKnown RBP eCLIP7.72□□□□□ -1.176e-8■■■□□ 15.7
TOPBP1-209ENST00000513818 LYRM1O43325 122 aa7.72□□□□□ -1.17
TOPBP1-209ENST00000513818 EIF4EBP3O60516 100 aaPredicted RBP7.72□□□□□ -1.17
TOPBP1-209ENST00000513818 OPN1MWP04001 364 aa7.72□□□□□ -1.17
TOPBP1-209ENST00000513818 OPN1MW2P0DN77 364 aa7.72□□□□□ -1.17
TOPBP1-209ENST00000513818 OPN1MW3P0DN78 364 aa7.72□□□□□ -1.17
TOPBP1-209ENST00000513818 AKR1C4P17516 323 aa7.72□□□□□ -1.17
TOPBP1-209ENST00000513818 ECI1P42126 302 aa7.72□□□□□ -1.17
TOPBP1-209ENST00000513818 LGALS7P47929 136 aa7.72□□□□□ -1.17
TOPBP1-209ENST00000513818 COMPP49747 757 aaPredicted RBP7.72□□□□□ -1.17
TOPBP1-209ENST00000513818 CX3CL1P78423 397 aa7.72□□□□□ -1.17
TOPBP1-209ENST00000513818 SURF2Q15527 256 aaPredicted RBP7.72□□□□□ -1.17
TOPBP1-209ENST00000513818 TNXAQ16473 311 aa7.72□□□□□ -1.17
TOPBP1-209ENST00000513818 IZUMO4Q1ZYL8 232 aa7.72□□□□□ -1.17
TOPBP1-209ENST00000513818 OR4A47Q6IF82 309 aa7.72□□□□□ -1.17
TOPBP1-209ENST00000513818 LCNL1Q6ZST4 164 aa7.72□□□□□ -1.17
TOPBP1-209ENST00000513818 PPP1R27Q86WC6 154 aa7.72□□□□□ -1.17
TOPBP1-209ENST00000513818 DMBX1Q8NFW5 382 aa7.72□□□□□ -1.17
TOPBP1-209ENST00000513818 ARPC1AQ92747 370 aa7.72□□□□□ -1.17
TOPBP1-209ENST00000513818 RNF5Q99942 180 aa7.72□□□□□ -1.17
TOPBP1-209ENST00000513818 ZNF430Q9H8G1 570 aaPredicted RBP7.72□□□□□ -1.17
TOPBP1-209ENST00000513818 TMEM140Q9NV12 185 aa7.72□□□□□ -1.17
TOPBP1-209ENST00000513818 MMP24Q9Y5R2 645 aa7.72□□□□□ -1.17
TOPBP1-209ENST00000513818 CMYA5Q8N3K9 4069 aa7.72□□□□□ -1.17
TOPBP1-209ENST00000513818 NAP1L6A6NFF2 107 aa7.71□□□□□ -1.18
TOPBP1-209ENST00000513818 CRYM-AS1A6NIL9 109 aa7.71□□□□□ -1.18
TOPBP1-209ENST00000513818 KBTBD11O94819 623 aa7.71□□□□□ -1.18
TOPBP1-209ENST00000513818 NDUFB6O95139 128 aa7.71□□□□□ -1.18
TOPBP1-209ENST00000513818 HPRT1P00492 218 aa7.71□□□□□ -1.18
TOPBP1-209ENST00000513818 KRASP01116 189 aa7.71□□□□□ -1.18
TOPBP1-209ENST00000513818 CD28P10747 220 aa7.71□□□□□ -1.18
TOPBP1-209ENST00000513818 ANXA7P20073 488 aaKnown RBP7.71□□□□□ -1.18
TOPBP1-209ENST00000513818 TAS2R31P59538 309 aa7.71□□□□□ -1.18
TOPBP1-209ENST00000513818 OR2B8PP59922 312 aa7.71□□□□□ -1.18
TOPBP1-209ENST00000513818 ERVK-16P61578 105 aa7.71□□□□□ -1.18
TOPBP1-209ENST00000513818 FXYD3Q14802 87 aa7.71□□□□□ -1.18
TOPBP1-209ENST00000513818 RBMS2Q15434 407 aaKnown RBP7.71□□□□□ -1.18
TOPBP1-209ENST00000513818 PRSS8Q16651 343 aa7.71□□□□□ -1.18
TOPBP1-209ENST00000513818 TRIM16LQ309B1 348 aa7.71□□□□□ -1.18
TOPBP1-209ENST00000513818 LCE2CQ5TA81 110 aa7.71□□□□□ -1.18
TOPBP1-209ENST00000513818 FOXRED2Q8IWF2 684 aa7.71□□□□□ -1.18
TOPBP1-209ENST00000513818 PUSL1Q8N0Z8 303 aaKnown RBP7.71□□□□□ -1.18
TOPBP1-209ENST00000513818 STPG2Q8N412 459 aa7.71□□□□□ -1.18
TOPBP1-209ENST00000513818 C3orf56Q8N813 242 aa7.71□□□□□ -1.18
TOPBP1-209ENST00000513818 LHFPL5Q8TAF8 219 aa7.71□□□□□ -1.18
TOPBP1-209ENST00000513818 CASTOR1Q8WTX7 329 aa7.71□□□□□ -1.18
TOPBP1-209ENST00000513818 WNT10AQ9GZT5 417 aa7.71□□□□□ -1.18
TOPBP1-209ENST00000513818 OR51J1Q9H342 316 aa7.71□□□□□ -1.18
TOPBP1-209ENST00000513818 PLEKHA2Q9HB19 425 aa7.71□□□□□ -1.18
TOPBP1-209ENST00000513818 COMMD9Q9P000 198 aa7.71□□□□□ -1.18
TOPBP1-209ENST00000513818 NSG2Q9Y328 171 aa7.71□□□□□ -1.18
TOPBP1-209ENST00000513818 TRAV6A0A075B6T7 132 aa7.7□□□□□ -1.18
TOPBP1-209ENST00000513818 A0A0G2JRQ6 117 aa7.7□□□□□ -1.18
TOPBP1-209ENST00000513818 A0A1B0GUS0 222 aa7.7□□□□□ -1.18
TOPBP1-209ENST00000513818 PSMB11A5LHX3 300 aa7.7□□□□□ -1.18
TOPBP1-209ENST00000513818 MARCH11A6NNE9 402 aa7.7□□□□□ -1.18
TOPBP1-209ENST00000513818 CENPXA8MT69 81 aa7.7□□□□□ -1.18
TOPBP1-209ENST00000513818 AP4M1O00189 453 aa7.7□□□□□ -1.18
TOPBP1-209ENST00000513818 KCNAB3O43448 404 aa7.7□□□□□ -1.18
TOPBP1-209ENST00000513818 OR2A4O95047 310 aa7.7□□□□□ -1.18
TOPBP1-209ENST00000513818 CNIH1O95406 144 aa7.7□□□□□ -1.18
TOPBP1-209ENST00000513818 HRASP01112 189 aa7.7□□□□□ -1.18
TOPBP1-209ENST00000513818 IGKV1-5P01602 117 aa7.7□□□□□ -1.18
TOPBP1-209ENST00000513818 SERPINE2P07093 398 aa7.7□□□□□ -1.18
TOPBP1-209ENST00000513818 OR9G9P0C7N8 305 aa7.7□□□□□ -1.18
TOPBP1-209ENST00000513818 EGR2P11161 476 aaPredicted RBP7.7□□□□□ -1.18
TOPBP1-209ENST00000513818 NQO2P16083 231 aa7.7□□□□□ -1.18
TOPBP1-209ENST00000513818 VDAC1P21796 283 aa7.7□□□□□ -1.18
TOPBP1-209ENST00000513818 MECP2P51608 486 aaKnown RBP7.7□□□□□ -1.18
TOPBP1-209ENST00000513818 SUPT4H1P63272 117 aaKnown RBP7.7□□□□□ -1.18
TOPBP1-209ENST00000513818 DEFA5Q01523 94 aa7.7□□□□□ -1.18
TOPBP1-209ENST00000513818 PPP1R1AQ13522 171 aa7.7□□□□□ -1.18
TOPBP1-209ENST00000513818 KHDC1LQ5JSQ8 128 aa7.7□□□□□ -1.18
TOPBP1-209ENST00000513818 C19orf35Q6ZS72 473 aa7.7□□□□□ -1.18
TOPBP1-209ENST00000513818 CENPVQ7Z7K6 275 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms