RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 BCL2L11O43521 198 aa8.02□□□□□ -1.13
TPM3-221ENST00000513769 S1PR2O95136 353 aa8.02□□□□□ -1.13
TPM3-221ENST00000513769 GATA3P23771 443 aa8.02□□□□□ -1.13
TPM3-221ENST00000513769 HTR1DP28221 377 aa8.02□□□□□ -1.13
TPM3-221ENST00000513769 GNG10P50151 68 aa8.02□□□□□ -1.13
TPM3-221ENST00000513769 UBE2KP61086 200 aa8.02□□□□□ -1.13
TPM3-221ENST00000513769 ARF6P62330 175 aa8.02□□□□□ -1.13
TPM3-221ENST00000513769 UBA52P62987 128 aaKnown RBP8.02□□□□□ -1.13
TPM3-221ENST00000513769 TNFRSF9Q07011 255 aa8.02□□□□□ -1.13
TPM3-221ENST00000513769 CCDC144NLQ6NUI1 221 aa8.02□□□□□ -1.13
TPM3-221ENST00000513769 OR8H3Q8N146 312 aa8.02□□□□□ -1.13
TPM3-221ENST00000513769 CLDND2Q8NHS1 167 aa8.02□□□□□ -1.13
TPM3-221ENST00000513769 STOML3Q8TAV4 291 aa8.02□□□□□ -1.13
TPM3-221ENST00000513769 MBD6Q96DN6 1003 aa8.02□□□□□ -1.13
TPM3-221ENST00000513769 MALSU1Q96EH3 234 aa8.02□□□□□ -1.13
TPM3-221ENST00000513769 C1orf159Q96HA4 380 aa8.02□□□□□ -1.13
TPM3-221ENST00000513769 NABP2Q9BQ15 211 aa8.02□□□□□ -1.13
TPM3-221ENST00000513769 LPAR2Q9HBW0 351 aa8.02□□□□□ -1.13
TPM3-221ENST00000513769 SLC35D1Q9NTN3 355 aa8.02□□□□□ -1.13
TPM3-221ENST00000513769 BET1LQ9NYM9 111 aa8.02□□□□□ -1.13
TPM3-221ENST00000513769 PRNDQ9UKY0 176 aa8.02□□□□□ -1.13
TPM3-221ENST00000513769 WASHC3Q9Y3C0 194 aa8.02□□□□□ -1.13
TPM3-221ENST00000513769 POLQO75417 2590 aa8.02□□□□□ -1.13
TPM3-221ENST00000513769 FBN2P35556 2912 aa8.02□□□□□ -1.13
TPM3-221ENST00000513769 MALRD1Q5VYJ5 2156 aa8.01□□□□□ -1.13
TPM3-221ENST00000513769 BORCS7-ASMTA0A0B4J1R7 106 aa8.01□□□□□ -1.13
TPM3-221ENST00000513769 IGHV2-70DA0A0C4DH43 119 aa8.01□□□□□ -1.13
TPM3-221ENST00000513769 A0A0G2JRQ6 117 aa8.01□□□□□ -1.13
TPM3-221ENST00000513769 H0YJW9 148 aa8.01□□□□□ -1.13
TPM3-221ENST00000513769 SCGB1D2O95969 90 aa8.01□□□□□ -1.13
TPM3-221ENST00000513769 IGHV3-7P01780 117 aa8.01□□□□□ -1.13
TPM3-221ENST00000513769 TPT1P13693 172 aaKnown RBP8.01□□□□□ -1.13
TPM3-221ENST00000513769 ZFP36P26651 326 aaKnown RBP8.01□□□□□ -1.13
TPM3-221ENST00000513769 CD1BP29016 333 aa8.01□□□□□ -1.13
TPM3-221ENST00000513769 UBE2E1P51965 193 aa8.01□□□□□ -1.13
TPM3-221ENST00000513769 PAX9P55771 341 aa8.01□□□□□ -1.13
TPM3-221ENST00000513769 RAB14P61106 215 aa8.01□□□□□ -1.13
TPM3-221ENST00000513769 HSPE1P61604 102 aaKnown RBP8.01□□□□□ -1.13
TPM3-221ENST00000513769 POLR2GP62487 172 aaKnown RBP eCLIP8.01□□□□□ -1.13
TPM3-221ENST00000513769 PAX8Q06710 450 aa8.01□□□□□ -1.13
TPM3-221ENST00000513769 ATP6V1FQ16864 119 aa8.01□□□□□ -1.13
TPM3-221ENST00000513769 BAP18Q8IXM2 172 aa8.01□□□□□ -1.13
TPM3-221ENST00000513769 TMEM252Q8N6L7 170 aa8.01□□□□□ -1.13
TPM3-221ENST00000513769 TEX45Q8NA69 505 aa8.01□□□□□ -1.13
TPM3-221ENST00000513769 UBAC2Q8NBM4 344 aa8.01□□□□□ -1.13
TPM3-221ENST00000513769 SCARB1Q8WTV0 552 aa8.01□□□□□ -1.13
TPM3-221ENST00000513769 HIPK2Q9H2X6 1198 aa8.01□□□□□ -1.13
TPM3-221ENST00000513769 ZC4H2Q9NQZ6 224 aa8.01□□□□□ -1.13
TPM3-221ENST00000513769 ONECUT1Q9UBC0 465 aa8.01□□□□□ -1.13
TPM3-221ENST00000513769 UBQLN2Q9UHD9 624 aa8.01□□□□□ -1.13
TPM3-221ENST00000513769 RCL1Q9Y2P8 373 aaKnown RBP8.01□□□□□ -1.13
TPM3-221ENST00000513769 TBL2Q9Y4P3 447 aaKnown RBP8.01□□□□□ -1.13
TPM3-221ENST00000513769 C2CD3Q4AC94 2353 aa8.01□□□□□ -1.13
TPM3-221ENST00000513769 INS-IGF2F8WCM5 200 aa8□□□□□ -1.13
TPM3-221ENST00000513769 UPK2O00526 184 aa8□□□□□ -1.13
TPM3-221ENST00000513769 SHOXO15266 292 aa8□□□□□ -1.13
TPM3-221ENST00000513769 DFFBO76075 338 aa8□□□□□ -1.13
TPM3-221ENST00000513769 KBTBD11O94819 623 aa8□□□□□ -1.13
TPM3-221ENST00000513769 CRYZL1O95825 349 aa8□□□□□ -1.13
TPM3-221ENST00000513769 USF1P22415 310 aaPredicted RBP8□□□□□ -1.13
TPM3-221ENST00000513769 MAS1LP35410 378 aa8□□□□□ -1.13
TPM3-221ENST00000513769 SULT1A1P50225 295 aa8□□□□□ -1.13
TPM3-221ENST00000513769 DVL1P1P54792 670 aaPredicted RBP8□□□□□ -1.13
TPM3-221ENST00000513769 LGALS4P56470 323 aa8□□□□□ -1.13
TPM3-221ENST00000513769 LINC00205P59089 165 aa8□□□□□ -1.13
TPM3-221ENST00000513769 BPIFB3P59826 476 aa8□□□□□ -1.13
TPM3-221ENST00000513769 HABP2Q14520 560 aaPredicted RBP8□□□□□ -1.13
TPM3-221ENST00000513769 ZNF266Q14584 549 aa8□□□□□ -1.13
TPM3-221ENST00000513769 UTF1Q5T230 341 aa8□□□□□ -1.13
TPM3-221ENST00000513769 OR4P4Q8NGL7 312 aa8□□□□□ -1.13
TPM3-221ENST00000513769 OR5B3Q8NH48 314 aa8□□□□□ -1.13
TPM3-221ENST00000513769 RPEQ96AT9 228 aa8□□□□□ -1.13
TPM3-221ENST00000513769 CLCC1Q96S66 551 aa8□□□□□ -1.13
TPM3-221ENST00000513769 SIRPDQ9H106 197 aa8□□□□□ -1.13
TPM3-221ENST00000513769 SLC25A32Q9H2D1 315 aa8□□□□□ -1.13
TPM3-221ENST00000513769 CYTL1Q9NRR1 136 aa8□□□□□ -1.13
TPM3-221ENST00000513769 TMEM14BQ9NUH8 114 aa8□□□□□ -1.13
TPM3-221ENST00000513769 PSENENQ9NZ42 101 aa8□□□□□ -1.13
TPM3-221ENST00000513769 FOXA2Q9Y261 457 aaPredicted RBP8□□□□□ -1.13
TPM3-221ENST00000513769 OTOGQ6ZRI0 2925 aa7.99□□□□□ -1.13
TPM3-221ENST00000513769 IGHV1-3A0A0C4DH29 117 aa7.99□□□□□ -1.13
TPM3-221ENST00000513769 ODF3BA8MYP8 253 aa7.99□□□□□ -1.13
TPM3-221ENST00000513769 B4DSR2 109 aa7.99□□□□□ -1.13
TPM3-221ENST00000513769 H7C2Y5 167 aa7.99□□□□□ -1.13
TPM3-221ENST00000513769 RBMXL2O75526 392 aaKnown RBP7.99□□□□□ -1.13
TPM3-221ENST00000513769 TOX4O94842 621 aa7.99□□□□□ -1.13
TPM3-221ENST00000513769 COMPP49747 757 aaPredicted RBP7.99□□□□□ -1.13
TPM3-221ENST00000513769 RPS16P62249 146 aaKnown RBP7.99□□□□□ -1.13
TPM3-221ENST00000513769 HBG1P69891 147 aa7.99□□□□□ -1.13
TPM3-221ENST00000513769 HBG2P69892 147 aa7.99□□□□□ -1.13
TPM3-221ENST00000513769 CLLU1Q5K131 121 aa7.99□□□□□ -1.13
TPM3-221ENST00000513769 OR4A47Q6IF82 309 aa7.99□□□□□ -1.13
TPM3-221ENST00000513769 STX12Q86Y82 276 aa7.99□□□□□ -1.13
TPM3-221ENST00000513769 THNSL2Q86YJ6 484 aa7.99□□□□□ -1.13
TPM3-221ENST00000513769 STPG2Q8N412 459 aa7.99□□□□□ -1.13
TPM3-221ENST00000513769 PNKDQ8N490 385 aa7.99□□□□□ -1.13
TPM3-221ENST00000513769 TMEM167AQ8TBQ9 72 aa7.99□□□□□ -1.13
TPM3-221ENST00000513769 ST8SIA2Q92186 375 aa7.99□□□□□ -1.13
TPM3-221ENST00000513769 TSNAXQ99598 290 aaKnown RBP7.99□□□□□ -1.13
TPM3-221ENST00000513769 GGACTQ9BVM4 153 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms