RNA–Protein interactions for RNA: ENST00000513495.5

SH3TC1-223, Transcript of SH3 domain and tetratricopeptide repeats 1, human

TSL 4

Gene SH3TC1, Length 600 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3TC1-223	ENST00000513495	GPN1	Q9HCN4	374 aa	Predicted RBP	12.5	□□□□□ -0.41
SH3TC1-223	ENST00000513495	TMEM140	Q9NV12	185 aa		12.5	□□□□□ -0.41
SH3TC1-223	ENST00000513495	PRAF2	O60831	178 aa		12.49	□□□□□ -0.41
SH3TC1-223	ENST00000513495	DHFR	P00374	187 aa		12.49	□□□□□ -0.41
SH3TC1-223	ENST00000513495	CA2	P00918	260 aa		12.49	□□□□□ -0.41
SH3TC1-223	ENST00000513495	AMY1A	P04745	511 aa		12.49	□□□□□ -0.41
SH3TC1-223	ENST00000513495	MAS1L	P35410	378 aa		12.49	□□□□□ -0.41
SH3TC1-223	ENST00000513495	SUPT4H1	P63272	117 aa	Known RBP	12.49	□□□□□ -0.41
SH3TC1-223	ENST00000513495	TMEM187	Q14656	261 aa		12.49	□□□□□ -0.41
SH3TC1-223	ENST00000513495		Q6ZSV7	163 aa		12.49	□□□□□ -0.41
SH3TC1-223	ENST00000513495	FAM219A	Q8IW50	185 aa		12.49	□□□□□ -0.41
SH3TC1-223	ENST00000513495	PUSL1	Q8N0Z8	303 aa	Known RBP	12.49	□□□□□ -0.41
SH3TC1-223	ENST00000513495	CADM3	Q8N126	398 aa		12.49	□□□□□ -0.41
SH3TC1-223	ENST00000513495	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	12.49	□□□□□ -0.41
SH3TC1-223	ENST00000513495	TMEM167A	Q8TBQ9	72 aa		12.49	□□□□□ -0.41
SH3TC1-223	ENST00000513495	TMEM56	Q96MV1	263 aa		12.49	□□□□□ -0.41
SH3TC1-223	ENST00000513495	GON7	Q9BXV9	100 aa		12.49	□□□□□ -0.41
SH3TC1-223	ENST00000513495	C16orf95	Q9H693	158 aa		12.49	□□□□□ -0.41
SH3TC1-223	ENST00000513495	ZNF702P	Q9H963	129 aa		12.49	□□□□□ -0.41
SH3TC1-223	ENST00000513495	FKBP11	Q9NYL4	201 aa		12.49	□□□□□ -0.41
SH3TC1-223	ENST00000513495	TMEM56-RWDD3	S4R434	201 aa		12.49	□□□□□ -0.41
SH3TC1-223	ENST00000513495	DUXB	A0A1W2PPF3	345 aa		12.48	□□□□□ -0.41
SH3TC1-223	ENST00000513495	C9orf170	A2RU37	121 aa		12.48	□□□□□ -0.41
SH3TC1-223	ENST00000513495	SH2D7	A6NKC9	451 aa	Predicted RBP	12.48	□□□□□ -0.41
SH3TC1-223	ENST00000513495	INMT-MINDY4	F8WBC2	141 aa		12.48	□□□□□ -0.41
SH3TC1-223	ENST00000513495	AP4M1	O00189	453 aa		12.48	□□□□□ -0.41
SH3TC1-223	ENST00000513495	RBMXL2	O75526	392 aa	Known RBP	12.48	□□□□□ -0.41
SH3TC1-223	ENST00000513495	DUS4L	O95620	317 aa	Known RBP	12.48	□□□□□ -0.41
SH3TC1-223	ENST00000513495	IGHG2	P01859	326 aa		12.48	□□□□□ -0.41
SH3TC1-223	ENST00000513495	CRYGB	P07316	175 aa		12.48	□□□□□ -0.41
SH3TC1-223	ENST00000513495	RPL8	P62917	257 aa	Known RBP	12.48	□□□□□ -0.41
SH3TC1-223	ENST00000513495	DHRS2	Q13268	280 aa		12.48	□□□□□ -0.41
SH3TC1-223	ENST00000513495	TNXA	Q16473	311 aa		12.48	□□□□□ -0.41
SH3TC1-223	ENST00000513495	PRSS8	Q16651	343 aa		12.48	□□□□□ -0.41
SH3TC1-223	ENST00000513495	ZNF562	Q6V9R5	426 aa		12.48	□□□□□ -0.41
SH3TC1-223	ENST00000513495		Q8N2B8	174 aa		12.48	□□□□□ -0.41
SH3TC1-223	ENST00000513495	OR4A16	Q8NH70	328 aa		12.48	□□□□□ -0.41
SH3TC1-223	ENST00000513495	SEC22A	Q96IW7	307 aa		12.48	□□□□□ -0.41
SH3TC1-223	ENST00000513495	COMMD5	Q9GZQ3	224 aa		12.48	□□□□□ -0.41
SH3TC1-223	ENST00000513495	PARP11	Q9NR21	331 aa		12.48	□□□□□ -0.41
SH3TC1-223	ENST00000513495	NF1	P21359	2839 aa		12.47	□□□□□ -0.41
SH3TC1-223	ENST00000513495		A0A0B4J2A0	478 aa		12.47	□□□□□ -0.41
SH3TC1-223	ENST00000513495	UPK2	O00526	184 aa		12.47	□□□□□ -0.41
SH3TC1-223	ENST00000513495	FGF2	P09038	288 aa		12.47	□□□□□ -0.41
SH3TC1-223	ENST00000513495	VDAC1	P21796	283 aa		12.47	□□□□□ -0.41
SH3TC1-223	ENST00000513495	MECP2	P51608	486 aa	Known RBP	12.47	□□□□□ -0.41
SH3TC1-223	ENST00000513495	TMEM267	Q0VDI3	215 aa	Predicted RBP	12.47	□□□□□ -0.41
SH3TC1-223	ENST00000513495	FXYD3	Q14802	87 aa		12.47	□□□□□ -0.41
SH3TC1-223	ENST00000513495	SELENOH	Q8IZQ5	122 aa	Known RBP	12.47	□□□□□ -0.41
SH3TC1-223	ENST00000513495	ARPC1A	Q92747	370 aa		12.47	□□□□□ -0.41
SH3TC1-223	ENST00000513495	PHB2	Q99623	299 aa		12.47	□□□□□ -0.41
SH3TC1-223	ENST00000513495	MARVELD1	Q9BSK0	173 aa		12.47	□□□□□ -0.41
SH3TC1-223	ENST00000513495	OR51J1	Q9H342	316 aa		12.47	□□□□□ -0.41
SH3TC1-223	ENST00000513495	ZNF430	Q9H8G1	570 aa	Predicted RBP	12.47	□□□□□ -0.41
SH3TC1-223	ENST00000513495	TPSG1	Q9NRR2	321 aa		12.47	□□□□□ -0.41
SH3TC1-223	ENST00000513495	SHPK	Q9UHJ6	478 aa		12.47	□□□□□ -0.41
SH3TC1-223	ENST00000513495	PRND	Q9UKY0	176 aa		12.47	□□□□□ -0.41
SH3TC1-223	ENST00000513495	MMP24	Q9Y5R2	645 aa		12.47	□□□□□ -0.41
SH3TC1-223	ENST00000513495	IGHV7-81	A0A0B4J1V7	117 aa		12.46	□□□□□ -0.41
SH3TC1-223	ENST00000513495	CLPSL1	A2RUU4	121 aa		12.46	□□□□□ -0.41
SH3TC1-223	ENST00000513495	IGKV1-39	P01597	117 aa		12.46	□□□□□ -0.41
SH3TC1-223	ENST00000513495	IGKV1D-39	P04432	117 aa		12.46	□□□□□ -0.41
SH3TC1-223	ENST00000513495	HLA-G	P17693	338 aa		12.46	□□□□□ -0.41
SH3TC1-223	ENST00000513495	SLC35B1	P78383	322 aa		12.46	□□□□□ -0.41
SH3TC1-223	ENST00000513495	CX3CL1	P78423	397 aa		12.46	□□□□□ -0.41
SH3TC1-223	ENST00000513495	RELB	Q01201	579 aa		12.46	□□□□□ -0.41
SH3TC1-223	ENST00000513495	KRTAP24-1	Q3LI83	254 aa		12.46	□□□□□ -0.41
SH3TC1-223	ENST00000513495	SLC35G3	Q8N808	338 aa		12.46	□□□□□ -0.41
SH3TC1-223	ENST00000513495	LRTM2	Q8N967	370 aa		12.46	□□□□□ -0.41
SH3TC1-223	ENST00000513495	GRPEL2	Q8TAA5	225 aa		12.46	□□□□□ -0.41
SH3TC1-223	ENST00000513495	ZNF431	Q8TF32	576 aa	Predicted RBP	12.46	□□□□□ -0.41
SH3TC1-223	ENST00000513495	CHPT1	Q8WUD6	406 aa		12.46	□□□□□ -0.41
SH3TC1-223	ENST00000513495	LSM10	Q969L4	123 aa	Known RBP	12.46	□□□□□ -0.41
SH3TC1-223	ENST00000513495	PDCD10	Q9BUL8	212 aa		12.46	□□□□□ -0.41
SH3TC1-223	ENST00000513495	C19orf24	Q9BVV8	132 aa		12.46	□□□□□ -0.41
SH3TC1-223	ENST00000513495	CACFD1	Q9UGQ2	172 aa		12.46	□□□□□ -0.41
SH3TC1-223	ENST00000513495	FCN1	O00602	326 aa		12.45	□□□□□ -0.42
SH3TC1-223	ENST00000513495	IFNA21	P01568	189 aa		12.45	□□□□□ -0.42
SH3TC1-223	ENST00000513495	IGKV1-5	P01602	117 aa		12.45	□□□□□ -0.42
SH3TC1-223	ENST00000513495	IL5	P05113	134 aa		12.45	□□□□□ -0.42
SH3TC1-223	ENST00000513495	PJVK	Q0ZLH3	352 aa		12.45	□□□□□ -0.42
SH3TC1-223	ENST00000513495	THOC7	Q6I9Y2	204 aa	Known RBP	12.45	□□□□□ -0.42
SH3TC1-223	ENST00000513495	MRPL41	Q8IXM3	137 aa	Known RBP	12.45	□□□□□ -0.42
SH3TC1-223	ENST00000513495	SPIN2A	Q99865	258 aa		12.45	□□□□□ -0.42
SH3TC1-223	ENST00000513495	SPIN2B	Q9BPZ2	258 aa		12.45	□□□□□ -0.42
SH3TC1-223	ENST00000513495	HSPB9	Q9BQS6	159 aa		12.45	□□□□□ -0.42
SH3TC1-223	ENST00000513495	PRR13	Q9NZ81	148 aa		12.45	□□□□□ -0.42
SH3TC1-223	ENST00000513495	TMED3	Q9Y3Q3	217 aa		12.45	□□□□□ -0.42
SH3TC1-223	ENST00000513495	RNF114	Q9Y508	228 aa		12.45	□□□□□ -0.42
SH3TC1-223	ENST00000513495	TMEM89	A2RUT3	159 aa		12.44	□□□□□ -0.42
SH3TC1-223	ENST00000513495	ATP6V0E1	O15342	81 aa		12.44	□□□□□ -0.42
SH3TC1-223	ENST00000513495	RPL27A	P46776	148 aa	Known RBP	12.44	□□□□□ -0.42
SH3TC1-223	ENST00000513495	COMP	P49747	757 aa	Predicted RBP	12.44	□□□□□ -0.42
SH3TC1-223	ENST00000513495	ANKRD55	Q3KP44	614 aa		12.44	□□□□□ -0.42
SH3TC1-223	ENST00000513495	CENPV	Q7Z7K6	275 aa	Predicted RBP	12.44	□□□□□ -0.42
SH3TC1-223	ENST00000513495	MINDY2	Q8NBR6	621 aa		12.44	□□□□□ -0.42
SH3TC1-223	ENST00000513495	LINC01006	Q8NI28	216 aa		12.44	□□□□□ -0.42
SH3TC1-223	ENST00000513495	LHFPL5	Q8TAF8	219 aa		12.44	□□□□□ -0.42
SH3TC1-223	ENST00000513495	MITD1	Q8WV92	249 aa		12.44	□□□□□ -0.42
SH3TC1-223	ENST00000513495	SRSF12	Q8WXF0	261 aa	Known RBP	12.44	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms