RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 DUX4L7P0CJ90 424 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 PSG2P11465 335 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 CRISP2P16562 243 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 PRTN3P24158 256 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 OTX1P32242 354 aaPredicted RBP2.85□□□□□ -1.95
HTT-210ENST00000512909 CFHR2P36980 270 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 TGM4P49221 684 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 OR12D2P58182 307 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 UBA52P62987 128 aaKnown RBP2.85□□□□□ -1.95
HTT-210ENST00000512909 MED21Q13503 144 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 EDDM3AQ14507 147 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 SLC9A3R2Q15599 337 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 LY6EQ16553 131 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 CASC10Q5T4H9 136 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 PRAMEF5Q5TYX0 476 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 OR2G6Q5TZ20 316 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 AADACL4Q5VUY2 407 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 TMEM244Q5VVB8 128 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 LPCAT4Q643R3 524 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 DUX4L9Q6RFH8 374 aaPredicted RBP2.85□□□□□ -1.95
HTT-210ENST00000512909 SLC25A26Q70HW3 274 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 SSX6Q7RTT6 188 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 VMO1Q7Z5L0 202 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 WDR86Q86TI4 376 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 ZNF429Q86V71 674 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 C6orf223Q8N319 242 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 ZDHHC22Q8N966 263 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 OR51G1Q8NGK1 321 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 TSEN15Q8WW01 171 aaKnown RBP2.85□□□□□ -1.95
HTT-210ENST00000512909 DUS3LQ96G46 650 aaKnown RBP2.85□□□□□ -1.95
HTT-210ENST00000512909 FAM210BQ96KR6 192 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 S100A13Q99584 98 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 SLC29A1Q99808 456 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 OR51I2Q9H344 312 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 FAM206AQ9NX38 181 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 RASL12Q9NYN1 266 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 CALYQ9NYX4 217 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 DUX4Q9UBX2 424 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 MRM2Q9UI43 246 aaKnown RBP2.85□□□□□ -1.95
HTT-210ENST00000512909 RPUSD1Q9UJJ7 312 aaKnown RBP2.85□□□□□ -1.95
HTT-210ENST00000512909 SPG11Q96JI7 2443 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 ALPK2Q86TB3 2170 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 ITPR3Q14573 2671 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 HIVEP1P15822 2718 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 CCDC168Q8NDH2 2452 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 PRR14LQ5THK1 2151 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 SPENQ96T58 3664 aaKnown RBP2.84□□□□□ -1.95
HTT-210ENST00000512909 AKAP6Q13023 2319 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 IGHV1-69DA0A0B4J2H0 117 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 A0A1B0GTI1 187 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 PNMA8CA0A1B0GUJ8 204 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 SMCO3A2RU48 225 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 C12orf77C9JDV5 145 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 SIRPB1O00241 398 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 DEGS1O15121 323 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 NPFFO15130 113 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 MPZL2O60487 215 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 GATBO75879 557 aaKnown RBP2.84□□□□□ -1.95
HTT-210ENST00000512909 IGHV1-69P01742 117 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 PRKACAP17612 351 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 ATF1P18846 271 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 AZU1P20160 251 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 PRKACBP22694 351 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 RBP2P50120 134 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 SUB1P53999 127 aaKnown RBP eCLIP2.84□□□□□ -1.95
HTT-210ENST00000512909 RPL31P62899 125 aaKnown RBP2.84□□□□□ -1.95
HTT-210ENST00000512909 ACTC1P68032 377 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 ACTA1P68133 377 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 KLRD1Q13241 179 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 TMED1Q13445 227 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 KIAA0087Q14695 138 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 GRK1Q15835 563 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 DGUOKQ16854 277 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 SMIM21Q3B7S5 101 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 C6orf226Q5I0X4 101 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 TEX36Q5VZQ5 186 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 LCN12Q6JVE5 192 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 TMPRSS11AQ6ZMR5 421 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 ACP7Q6ZNF0 438 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 ENTHD1Q8IYW4 607 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 ACBD7Q8N6N7 88 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 TPRX1Q8N7U7 411 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 OR5D18Q8NGL1 313 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 OR5D14Q8NGL3 314 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 OR13C9Q8NGT0 318 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 OR10Z1Q8NGY1 313 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 OR5AK2Q8NH90 309 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 CAPSLQ8WWF8 208 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 AQP3Q92482 292 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 RORBQ92753 470 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 CEP19Q96LK0 163 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 GAFA1Q96PS6 74 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 SPACA5Q96QH8 159 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 GABARAPL1Q9H0R8 117 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 BEX1Q9HBH7 125 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 V9GYS6 101 aa2.84□□□□□ -1.95
HTT-210ENST00000512909 TACC2O95359 2948 aa2.84□□□□□ -1.96
HTT-210ENST00000512909 F8P00451 2351 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 ANKHD1Q8IWZ3 2542 aaKnown RBP2.83□□□□□ -1.96
HTT-210ENST00000512909 IGKV1D-17A0A075B6S4 117 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms