RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 ERCC8Q13216 396 aa7.58□□□□□ -1.2
VCAN-208ENST00000512590 PRDM13Q9H4Q3 707 aa7.58□□□□□ -1.2
VCAN-208ENST00000512590 CXorf51AA0A1B0GTR3 108 aa7.58□□□□□ -1.2
VCAN-208ENST00000512590 CRLF1O75462 422 aa7.58□□□□□ -1.2
VCAN-208ENST00000512590 CCL18P55774 89 aa7.58□□□□□ -1.2
VCAN-208ENST00000512590 TMEM219Q86XT9 240 aa7.58□□□□□ -1.2
VCAN-208ENST00000512590 MAPK1IP1LQ8NDC0 245 aa7.58□□□□□ -1.2
VCAN-208ENST00000512590 CFHR5Q9BXR6 569 aa7.58□□□□□ -1.2
VCAN-208ENST00000512590 MON2Q7Z3U7 1717 aa7.58□□□□□ -1.2
VCAN-208ENST00000512590 TOPAZ1Q8N9V7 1692 aa7.58□□□□□ -1.2
VCAN-208ENST00000512590 IGKV1OR2-108A0A075B7D4 117 aa7.58□□□□□ -1.2
VCAN-208ENST00000512590 CTXND1A0A1B0GTU2 59 aa7.58□□□□□ -1.2
VCAN-208ENST00000512590 MOSPD3O75425 235 aa7.58□□□□□ -1.2
VCAN-208ENST00000512590 CBLN3Q6UW01 205 aa7.58□□□□□ -1.2
VCAN-208ENST00000512590 ASB13Q8WXK3 278 aa7.58□□□□□ -1.2
VCAN-208ENST00000512590 ISOC2Q96AB3 205 aa7.58□□□□□ -1.2
VCAN-208ENST00000512590 KNDC1Q76NI1 1749 aa7.58□□□□□ -1.2
VCAN-208ENST00000512590 IGHV4-39P01824 125 aa7.58□□□□□ -1.2
VCAN-208ENST00000512590 C11orf87Q6NUJ2 197 aa7.58□□□□□ -1.2
VCAN-208ENST00000512590 Q6ZT83 130 aa7.58□□□□□ -1.2
VCAN-208ENST00000512590 DMRTC2Q8IXT2 367 aaPredicted RBP7.58□□□□□ -1.2
VCAN-208ENST00000512590 NPIPB3Q92617 1050 aa7.58□□□□□ -1.2
VCAN-208ENST00000512590 SLC50A1Q9BRV3 221 aa7.58□□□□□ -1.2
VCAN-208ENST00000512590 PAPPAQ13219 1627 aa7.58□□□□□ -1.2
VCAN-208ENST00000512590 TCRBV16S1A1N1A0A5B0 115 aa7.57□□□□□ -1.2
VCAN-208ENST00000512590 CD5LO43866 347 aa7.57□□□□□ -1.2
VCAN-208ENST00000512590 TMEM50BP56557 158 aa7.57□□□□□ -1.2
VCAN-208ENST00000512590 RBM11P57052 281 aaKnown RBP7.57□□□□□ -1.2
VCAN-208ENST00000512590 HSPE1P61604 102 aaKnown RBP7.57□□□□□ -1.2
VCAN-208ENST00000512590 ST6GALNAC6Q969X2 333 aa7.57□□□□□ -1.2
VCAN-208ENST00000512590 ST6GAL2Q96JF0 529 aa7.57□□□□□ -1.2
VCAN-208ENST00000512590 KLF5Q13887 457 aaPredicted RBP7.57□□□□□ -1.2
VCAN-208ENST00000512590 FBLN7Q53RD9 439 aa7.57□□□□□ -1.2
VCAN-208ENST00000512590 BRD3OSQ6XYD6 125 aa7.57□□□□□ -1.2
VCAN-208ENST00000512590 RCC2Q9P258 522 aaKnown RBP7.57□□□□□ -1.2
VCAN-208ENST00000512590 IFT172Q9UG01 1749 aa7.57□□□□□ -1.2
VCAN-208ENST00000512590 CA1P00915 261 aaPredicted RBP7.57□□□□□ -1.2
VCAN-208ENST00000512590 SPNP16150 400 aa7.57□□□□□ -1.2
VCAN-208ENST00000512590 FAM74A3Q4VXF1 159 aa7.57□□□□□ -1.2
VCAN-208ENST00000512590 BHLHA9Q7RTU4 235 aa7.57□□□□□ -1.2
VCAN-208ENST00000512590 LINC00305Q7Z4B0 112 aa7.57□□□□□ -1.2
VCAN-208ENST00000512590 FAM169BQ8N8A8 192 aa7.57□□□□□ -1.2
VCAN-208ENST00000512590 CYSLTR1Q9Y271 337 aa7.57□□□□□ -1.2
VCAN-208ENST00000512590 NEUROG3Q9Y4Z2 214 aa7.57□□□□□ -1.2
VCAN-208ENST00000512590 TRAV1-2A0A0B4J238 106 aa7.57□□□□□ -1.2
VCAN-208ENST00000512590 FUT5Q11128 374 aa7.57□□□□□ -1.2
VCAN-208ENST00000512590 SRSF6Q13247 344 aaKnown RBP7.57□□□□□ -1.2
VCAN-208ENST00000512590 VMO1Q7Z5L0 202 aa7.57□□□□□ -1.2
VCAN-208ENST00000512590 FANCD2OSQ96PS1 177 aa7.57□□□□□ -1.2
VCAN-208ENST00000512590 TIMM17AQ99595 171 aa7.57□□□□□ -1.2
VCAN-208ENST00000512590 CELA3BP08861 270 aa7.57□□□□□ -1.2
VCAN-208ENST00000512590 CT62P0C5K7 136 aa7.57□□□□□ -1.2
VCAN-208ENST00000512590 LILRA6Q6PI73 481 aa7.57□□□□□ -1.2
VCAN-208ENST00000512590 RBFOX3A6NFN3 312 aa7.56□□□□□ -1.2
VCAN-208ENST00000512590 C17orf100A8MU93 164 aa7.56□□□□□ -1.2
VCAN-208ENST00000512590 C8orf88P0DMB2 117 aa7.56□□□□□ -1.2
VCAN-208ENST00000512590 P2RY4P51582 365 aa7.56□□□□□ -1.2
VCAN-208ENST00000512590 PRB3Q04118 309 aaPredicted RBP7.56□□□□□ -1.2
VCAN-208ENST00000512590 CR1LQ2VPA4 569 aa7.56□□□□□ -1.2
VCAN-208ENST00000512590 SPSB3Q6PJ21 355 aa7.56□□□□□ -1.2
VCAN-208ENST00000512590 CXCL16Q9H2A7 254 aa7.56□□□□□ -1.2
VCAN-208ENST00000512590 Q9HAA7 133 aa7.56□□□□□ -1.2
VCAN-208ENST00000512590 NFAT5O94916 1531 aa7.56□□□□□ -1.2
VCAN-208ENST00000512590 Q0VFX4 171 aa7.56□□□□□ -1.2
VCAN-208ENST00000512590 ST6GALNAC3Q8NDV1 305 aa7.56□□□□□ -1.2
VCAN-208ENST00000512590 WDR34Q96EX3 536 aa7.56□□□□□ -1.2
VCAN-208ENST00000512590 C9orf170A2RU37 121 aa7.56□□□□□ -1.2
VCAN-208ENST00000512590 TM4SF5O14894 197 aa7.56□□□□□ -1.2
VCAN-208ENST00000512590 SCTP09683 121 aa7.56□□□□□ -1.2
VCAN-208ENST00000512590 CFHR3Q02985 330 aa7.56□□□□□ -1.2
VCAN-208ENST00000512590 ZNF562Q6V9R5 426 aa7.56□□□□□ -1.2
VCAN-208ENST00000512590 ELF5Q9UKW6 265 aaPredicted RBP7.56□□□□□ -1.2
VCAN-208ENST00000512590 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.56□□□□□ -1.2
VCAN-208ENST00000512590 COX6A1P12074 109 aa7.56□□□□□ -1.2
VCAN-208ENST00000512590 PLP1P60201 277 aa7.56□□□□□ -1.2
VCAN-208ENST00000512590 C1orf220Q5T0J3 134 aa7.56□□□□□ -1.2
VCAN-208ENST00000512590 SIGLEC15Q6ZMC9 328 aa7.56□□□□□ -1.2
VCAN-208ENST00000512590 C9orf40Q8IXQ3 194 aa7.56□□□□□ -1.2
VCAN-208ENST00000512590 GSX2Q9BZM3 304 aa7.56□□□□□ -1.2
VCAN-208ENST00000512590 MBNL3Q9NUK0 354 aaKnown RBP7.56□□□□□ -1.2
VCAN-208ENST00000512590 LYNX1G3V0Z9 82 aa7.56□□□□□ -1.2
VCAN-208ENST00000512590 TMEM50AO95807 157 aa7.56□□□□□ -1.2
VCAN-208ENST00000512590 LYNX1P0DP58 116 aa7.56□□□□□ -1.2
VCAN-208ENST00000512590 HIST1H4AP62805 103 aaKnown RBP7.56□□□□□ -1.2
VCAN-208ENST00000512590 MPV17L2Q567V2 206 aa7.56□□□□□ -1.2
VCAN-208ENST00000512590 LINC01619G3V211 115 aa7.55□□□□□ -1.2
VCAN-208ENST00000512590 OVOL1O14753 267 aa7.55□□□□□ -1.2
VCAN-208ENST00000512590 WISP1O95388 367 aa7.55□□□□□ -1.2
VCAN-208ENST00000512590 IL11P20809 199 aa7.55□□□□□ -1.2
VCAN-208ENST00000512590 ZNF880Q6PDB4 577 aa7.55□□□□□ -1.2
VCAN-208ENST00000512590 OR10W1Q8NGF6 305 aa7.55□□□□□ -1.2
VCAN-208ENST00000512590 MRPL32Q9BYC8 188 aaKnown RBP7.55□□□□□ -1.2
VCAN-208ENST00000512590 TRAV25A0A0B4J276 109 aa7.55□□□□□ -1.2
VCAN-208ENST00000512590 GRIFINA4D1Z8 144 aa7.55□□□□□ -1.2
VCAN-208ENST00000512590 NDUFA3O95167 84 aa7.55□□□□□ -1.2
VCAN-208ENST00000512590 RUNX1Q01196 453 aa7.55□□□□□ -1.2
VCAN-208ENST00000512590 TNFRSF9Q07011 255 aa7.55□□□□□ -1.2
VCAN-208ENST00000512590 TMEM91Q6ZNR0 172 aa7.55□□□□□ -1.2
VCAN-208ENST00000512590 RASL10AQ92737 203 aa7.55□□□□□ -1.2
VCAN-208ENST00000512590 MSRB2Q9Y3D2 182 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms