RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-223ENST00000509900 EMP1P54849 157 aa6.65□□□□□ -1.34
PTPN20-223ENST00000509900 IRF3Q14653 427 aa6.65□□□□□ -1.34
PTPN20-223ENST00000509900 VMA21Q3ZAQ7 101 aa6.65□□□□□ -1.34
PTPN20-223ENST00000509900 CGB2Q6NT52 195 aa6.65□□□□□ -1.34
PTPN20-223ENST00000509900 PTX4Q96A99 478 aa6.65□□□□□ -1.34
PTPN20-223ENST00000509900 NIPSNAP3BQ9BS92 247 aa6.65□□□□□ -1.34
PTPN20-223ENST00000509900 ARL8BQ9NVJ2 186 aa6.65□□□□□ -1.34
PTPN20-223ENST00000509900 DKK2Q9UBU2 259 aa6.65□□□□□ -1.34
PTPN20-223ENST00000509900 V9GYY5 206 aaPredicted RBP6.65□□□□□ -1.34
PTPN20-223ENST00000509900 IGHV3-49A0A0A0MS15 119 aa6.64□□□□□ -1.35
PTPN20-223ENST00000509900 TCRBV5S2A0A599 114 aa6.64□□□□□ -1.35
PTPN20-223ENST00000509900 CHEK1O14757 476 aa6.64□□□□□ -1.35
PTPN20-223ENST00000509900 CCDC22O60826 627 aa6.64□□□□□ -1.35
PTPN20-223ENST00000509900 DFFBO76075 338 aa6.64□□□□□ -1.35
PTPN20-223ENST00000509900 ACTL6BO94805 426 aa6.64□□□□□ -1.35
PTPN20-223ENST00000509900 GLAP06280 429 aa6.64□□□□□ -1.35
PTPN20-223ENST00000509900 CRYGCP07315 174 aa6.64□□□□□ -1.35
PTPN20-223ENST00000509900 PRKACGP22612 351 aa6.64□□□□□ -1.35
PTPN20-223ENST00000509900 ZNF93P35789 620 aaPredicted RBP6.64□□□□□ -1.35
PTPN20-223ENST00000509900 CEACAM6P40199 344 aa6.64□□□□□ -1.35
PTPN20-223ENST00000509900 PTGES3Q15185 160 aaKnown RBP6.64□□□□□ -1.35
PTPN20-223ENST00000509900 DDI2Q5TDH0 399 aa6.64□□□□□ -1.35
PTPN20-223ENST00000509900 GID4Q8IVV7 300 aa6.64□□□□□ -1.35
PTPN20-223ENST00000509900 CXorf58Q96LI9 332 aa6.64□□□□□ -1.35
PTPN20-223ENST00000509900 IL4I1Q96RQ9 567 aa6.64□□□□□ -1.35
PTPN20-223ENST00000509900 S100A13Q99584 98 aa6.64□□□□□ -1.35
PTPN20-223ENST00000509900 RHPN1-AS1Q9BWJ2 59 aa6.64□□□□□ -1.35
PTPN20-223ENST00000509900 Q9H3A6 140 aa6.64□□□□□ -1.35
PTPN20-223ENST00000509900 MAGIXQ9H6Y5 334 aa6.64□□□□□ -1.35
PTPN20-223ENST00000509900 Q9H8V8 135 aa6.64□□□□□ -1.35
PTPN20-223ENST00000509900 ZNF556Q9HAH1 456 aa6.64□□□□□ -1.35
PTPN20-223ENST00000509900 SMPD3Q9NY59 655 aaPredicted RBP6.64□□□□□ -1.35
PTPN20-223ENST00000509900 WARS2Q9UGM6 360 aaKnown RBP6.64□□□□□ -1.35
PTPN20-223ENST00000509900 IGHV7-4-1A0A0J9YVY3 117 aa6.63□□□□□ -1.35
PTPN20-223ENST00000509900 DPPA5A6NC42 116 aa6.63□□□□□ -1.35
PTPN20-223ENST00000509900 NDUFA4O00483 81 aa6.63□□□□□ -1.35
PTPN20-223ENST00000509900 SAA1P0DJI8 122 aaPredicted RBP6.63□□□□□ -1.35
PTPN20-223ENST00000509900 RPL11P62913 178 aaKnown RBP6.63□□□□□ -1.35
PTPN20-223ENST00000509900 TTC32Q5I0X7 151 aa6.63□□□□□ -1.35
PTPN20-223ENST00000509900 FAM222AQ5U5X8 452 aa6.63□□□□□ -1.35
PTPN20-223ENST00000509900 MMD2Q8IY49 270 aa6.63□□□□□ -1.35
PTPN20-223ENST00000509900 C5orf30Q96GV9 206 aa6.63□□□□□ -1.35
PTPN20-223ENST00000509900 ZNF414Q96IQ9 312 aa6.63□□□□□ -1.35
PTPN20-223ENST00000509900 BANF2Q9H503 90 aa6.63□□□□□ -1.35
PTPN20-223ENST00000509900 OR2T8A6NH00 312 aa6.62□□□□□ -1.35
PTPN20-223ENST00000509900 KNCNA6PVL3 124 aa6.62□□□□□ -1.35
PTPN20-223ENST00000509900 C15orf62A8K5M9 175 aa6.62□□□□□ -1.35
PTPN20-223ENST00000509900 SLC16A6O15403 523 aa6.62□□□□□ -1.35
PTPN20-223ENST00000509900 PDCD6O75340 191 aa6.62□□□□□ -1.35
PTPN20-223ENST00000509900 CRYZL1O95825 349 aa6.62□□□□□ -1.35
PTPN20-223ENST00000509900 REG1AP05451 166 aa6.62□□□□□ -1.35
PTPN20-223ENST00000509900 HIST1H1BP16401 226 aaKnown RBP6.62□□□□□ -1.35
PTPN20-223ENST00000509900 MAS1LP35410 378 aa6.62□□□□□ -1.35
PTPN20-223ENST00000509900 CCL18P55774 89 aa6.62□□□□□ -1.35
PTPN20-223ENST00000509900 OXA1LQ15070 435 aa6.62□□□□□ -1.35
PTPN20-223ENST00000509900 CDK10Q15131 360 aa6.62□□□□□ -1.35
PTPN20-223ENST00000509900 RTL8BQ17RB0 113 aa6.62□□□□□ -1.35
PTPN20-223ENST00000509900 ZNF880Q6PDB4 577 aa6.62□□□□□ -1.35
PTPN20-223ENST00000509900 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.62□□□□□ -1.35
PTPN20-223ENST00000509900 TMEM116Q8NCL8 245 aa6.62□□□□□ -1.35
PTPN20-223ENST00000509900 PDCD1LG2Q9BQ51 273 aa6.62□□□□□ -1.35
PTPN20-223ENST00000509900 ELAC2Q9BQ52 826 aaKnown RBP6.62□□□□□ -1.35
PTPN20-223ENST00000509900 SELENOIQ9C0D9 397 aa6.62□□□□□ -1.35
PTPN20-223ENST00000509900 TMEM138Q9NPI0 162 aa6.62□□□□□ -1.35
PTPN20-223ENST00000509900 IGHV3OR16-13A0A075B7E8 117 aa6.61□□□□□ -1.35
PTPN20-223ENST00000509900 IGHV3-74A0A0B4J1X5 117 aa6.61□□□□□ -1.35
PTPN20-223ENST00000509900 A0A1W2PPQ1 181 aa6.61□□□□□ -1.35
PTPN20-223ENST00000509900 CREBL2O60519 120 aaPredicted RBP6.61□□□□□ -1.35
PTPN20-223ENST00000509900 NAPSAO96009 420 aa6.61□□□□□ -1.35
PTPN20-223ENST00000509900 DHFRP00374 187 aa6.61□□□□□ -1.35
PTPN20-223ENST00000509900 P0C879 139 aa6.61□□□□□ -1.35
PTPN20-223ENST00000509900 ZNF735P0CB33 412 aa6.61□□□□□ -1.35
PTPN20-223ENST00000509900 GCSHP23434 173 aa6.61□□□□□ -1.35
PTPN20-223ENST00000509900 ZBTB25P24278 435 aa6.61□□□□□ -1.35
PTPN20-223ENST00000509900 ATP6V1E1P36543 226 aa6.61□□□□□ -1.35
PTPN20-223ENST00000509900 SNRPGP62308 76 aaKnown RBP6.61□□□□□ -1.35
PTPN20-223ENST00000509900 CBX3Q13185 183 aa6.61□□□□□ -1.35
PTPN20-223ENST00000509900 GPR176Q14439 515 aa6.61□□□□□ -1.35
PTPN20-223ENST00000509900 TCF24Q7RTU0 167 aa6.61□□□□□ -1.35
PTPN20-223ENST00000509900 THTPAQ9BU02 230 aa6.61□□□□□ -1.35
PTPN20-223ENST00000509900 KRTAP9-8Q9BYQ0 159 aa6.61□□□□□ -1.35
PTPN20-223ENST00000509900 MS4A6AQ9H2W1 248 aa6.61□□□□□ -1.35
PTPN20-223ENST00000509900 SDHAF2Q9NX18 166 aa6.61□□□□□ -1.35
PTPN20-223ENST00000509900 TMEM189A5PLL7 270 aa6.6□□□□□ -1.35
PTPN20-223ENST00000509900 J3QLW9 94 aa6.6□□□□□ -1.35
PTPN20-223ENST00000509900 CST1P01037 141 aa6.6□□□□□ -1.35
PTPN20-223ENST00000509900 DNAH10OSP0CZ25 163 aa6.6□□□□□ -1.35
PTPN20-223ENST00000509900 RRASP10301 218 aa6.6□□□□□ -1.35
PTPN20-223ENST00000509900 DEFA4P12838 97 aa6.6□□□□□ -1.35
PTPN20-223ENST00000509900 ANXA8P13928 327 aa6.6□□□□□ -1.35
PTPN20-223ENST00000509900 MGMTP16455 207 aa6.6□□□□□ -1.35
PTPN20-223ENST00000509900 ZNF19P17023 458 aa6.6□□□□□ -1.35
PTPN20-223ENST00000509900 PTBP1P26599 531 aaKnown RBP eCLIP6.6□□□□□ -1.35
PTPN20-223ENST00000509900 RPL27AP46776 148 aaKnown RBP6.6□□□□□ -1.35
PTPN20-223ENST00000509900 LINC00315P59091 139 aa6.6□□□□□ -1.35
PTPN20-223ENST00000509900 ERVFC1-1P60608 527 aa6.6□□□□□ -1.35
PTPN20-223ENST00000509900 PAFAH1B2P68402 229 aa6.6□□□□□ -1.35
PTPN20-223ENST00000509900 USF2Q15853 346 aaPredicted RBP6.6□□□□□ -1.35
PTPN20-223ENST00000509900 C12orf73Q69YU5 71 aa6.6□□□□□ -1.35
PTPN20-223ENST00000509900 ZNF705AQ6ZN79 300 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms