RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 NDUFB4O95168 129 aa7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 PMP22Q01453 160 aa7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 ODF1Q14990 250 aa7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 ZNF826PQ6ZT77 177 aa7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 NECAP1Q8NC96 275 aa7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 MS4A5Q9H3V2 200 aa7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 TRAPPC1Q9Y5R8 145 aa7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 IGKV1D-17A0A075B6S4 117 aa7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 SAA2-SAA4A0A096LPE2 208 aa7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 IGHV2OR16-5A0A0B4J2B6 119 aa7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 PRR33A8MZF0 331 aa7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 MT-CO2P00403 227 aa7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 CECR9P0C854 216 aa7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 GCHFRP30047 84 aa7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 OR10J1P30954 320 aa7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 GATA4P43694 442 aa7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 ERVFC1-1P60608 527 aa7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 ERVK-16P61578 105 aa7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 ANKRD39Q53RE8 183 aa7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 FAM53AQ6NSI3 398 aaPredicted RBP7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 OR4A16Q8NH70 328 aa7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 OR4S2Q8NH73 311 aa7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 NEU1Q99519 415 aa7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 TCF19Q9Y242 345 aa7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 MDFIC2A0A1B0GVS7 189 aa7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 RRHO14718 337 aa7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 HMGB3O15347 200 aaKnown RBP7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 CGAP01215 116 aa7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 ARL14EPLP0DKL9 152 aa7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 THBS3P49746 956 aa7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 RHOBP62745 196 aa7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 RTL8BQ17RB0 113 aa7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 PRAMEF5Q5TYX0 476 aa7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 PRAMEF6Q5VXH4 476 aa7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 ZNF114Q8NC26 417 aa7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 OR10G8Q8NGN5 311 aa7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 TMEM37Q8WXS4 190 aa7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 SLC35E1Q96K37 410 aa7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 C20orf144Q9BQM9 153 aa7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 PRO1933Q9H354 126 aa7.62□□□□□ -1.19
PDGFRA-208ENST00000509490 TRAV38-1A0A0B4J264 116 aa7.61□□□□□ -1.19
PDGFRA-208ENST00000509490 A0A1B0GV90 55 aa7.61□□□□□ -1.19
PDGFRA-208ENST00000509490 LNP1A1A4G5 178 aa7.61□□□□□ -1.19
PDGFRA-208ENST00000509490 TIMM8AO60220 97 aaPredicted RBP7.61□□□□□ -1.19
PDGFRA-208ENST00000509490 C1QTNF9P0C862 333 aa7.61□□□□□ -1.19
PDGFRA-208ENST00000509490 SPINK2P20155 84 aa7.61□□□□□ -1.19
PDGFRA-208ENST00000509490 LGALS4P56470 323 aa7.61□□□□□ -1.19
PDGFRA-208ENST00000509490 HSPE1P61604 102 aaKnown RBP7.61□□□□□ -1.19
PDGFRA-208ENST00000509490 ZNF439Q8NDP4 499 aa7.61□□□□□ -1.19
PDGFRA-208ENST00000509490 TMEM140Q9NV12 185 aa7.61□□□□□ -1.19
PDGFRA-208ENST00000509490 FKBP11Q9NYL4 201 aa7.61□□□□□ -1.19
PDGFRA-208ENST00000509490 A0A0U1RQK1 487 aa7.61□□□□□ -1.19
PDGFRA-208ENST00000509490 ZNF320A2RRD8 509 aa7.61□□□□□ -1.19
PDGFRA-208ENST00000509490 LYZL6O75951 148 aa7.61□□□□□ -1.19
PDGFRA-208ENST00000509490 IGHV3-13P01766 116 aa7.61□□□□□ -1.19
PDGFRA-208ENST00000509490 CHRNA7P36544 502 aa7.61□□□□□ -1.19
PDGFRA-208ENST00000509490 NUTF2P61970 127 aaKnown RBP7.61□□□□□ -1.19
PDGFRA-208ENST00000509490 GCSAMLQ5JQS6 135 aa7.61□□□□□ -1.19
PDGFRA-208ENST00000509490 TEX43Q6ZNM6 134 aa7.61□□□□□ -1.19
PDGFRA-208ENST00000509490 SGMS2Q8NHU3 365 aa7.61□□□□□ -1.19
PDGFRA-208ENST00000509490 LRRC29Q8WV35 223 aa7.61□□□□□ -1.19
PDGFRA-208ENST00000509490 S1PR3Q99500 378 aa7.61□□□□□ -1.19
PDGFRA-208ENST00000509490 GNB1LQ9BYB4 327 aa7.61□□□□□ -1.19
PDGFRA-208ENST00000509490 CACNA1GO43497 2377 aa7.61□□□□□ -1.19
PDGFRA-208ENST00000509490 IGHV1-18A0A0C4DH31 117 aa7.6□□□□□ -1.19
PDGFRA-208ENST00000509490 CDX4O14627 284 aaPredicted RBP7.6□□□□□ -1.19
PDGFRA-208ENST00000509490 FCGR3BO75015 233 aa7.6□□□□□ -1.19
PDGFRA-208ENST00000509490 MMP23AO75900 390 aa7.6□□□□□ -1.19
PDGFRA-208ENST00000509490 MT-ND6P03923 174 aa7.6□□□□□ -1.19
PDGFRA-208ENST00000509490 REG1AP05451 166 aa7.6□□□□□ -1.19
PDGFRA-208ENST00000509490 LINC00869P0C866 280 aa7.6□□□□□ -1.19
PDGFRA-208ENST00000509490 GCH1P30793 250 aa7.6□□□□□ -1.19
PDGFRA-208ENST00000509490 ARG2P78540 354 aa7.6□□□□□ -1.19
PDGFRA-208ENST00000509490 EFNB3Q15768 340 aa7.6□□□□□ -1.19
PDGFRA-208ENST00000509490 ARSJQ5FYB0 599 aaPredicted RBP7.6□□□□□ -1.19
PDGFRA-208ENST00000509490 TEPPQ6URK8 271 aa7.6□□□□□ -1.19
PDGFRA-208ENST00000509490 OCC1Q8TAD7 63 aa7.6□□□□□ -1.19
PDGFRA-208ENST00000509490 MISP3Q96FF7 219 aa7.6□□□□□ -1.19
PDGFRA-208ENST00000509490 SDSLQ96GA7 329 aa7.6□□□□□ -1.19
PDGFRA-208ENST00000509490 ZNF71Q9NQZ8 489 aaPredicted RBP7.6□□□□□ -1.19
PDGFRA-208ENST00000509490 TMEM167BQ9NRX6 74 aa7.6□□□□□ -1.19
PDGFRA-208ENST00000509490 TP53TG3Q9ULZ0 132 aa7.6□□□□□ -1.19
PDGFRA-208ENST00000509490 YTHDF2Q9Y5A9 579 aaKnown RBP7.6□□□□□ -1.19
PDGFRA-208ENST00000509490 M0QZK8 103 aa7.6□□□□□ -1.19
PDGFRA-208ENST00000509490 EGR1P18146 543 aa7.6□□□□□ -1.19
PDGFRA-208ENST00000509490 RAB4AP20338 218 aa7.6□□□□□ -1.19
PDGFRA-208ENST00000509490 HOXC12P31275 282 aa7.6□□□□□ -1.19
PDGFRA-208ENST00000509490 PLA2G5P39877 138 aa7.6□□□□□ -1.19
PDGFRA-208ENST00000509490 LINC00310P59036 64 aa7.6□□□□□ -1.19
PDGFRA-208ENST00000509490 RANP62826 216 aaKnown RBP7.6□□□□□ -1.19
PDGFRA-208ENST00000509490 RAB31Q13636 194 aa7.6□□□□□ -1.19
PDGFRA-208ENST00000509490 C17orf58Q2M2W7 97 aa7.6□□□□□ -1.19
PDGFRA-208ENST00000509490 ZCCHC14Q8WYQ9 949 aaKnown RBP7.6□□□□□ -1.19
PDGFRA-208ENST00000509490 UHRF2Q96PU4 802 aa7.6□□□□□ -1.19
PDGFRA-208ENST00000509490 DERL1Q9BUN8 251 aa7.6□□□□□ -1.19
PDGFRA-208ENST00000509490 FAM234AQ9H0X4 552 aa7.6□□□□□ -1.19
PDGFRA-208ENST00000509490 OSTCQ9NRP0 149 aa7.6□□□□□ -1.19
PDGFRA-208ENST00000509490 NAGKQ9UJ70 344 aa7.6□□□□□ -1.19
PDGFRA-208ENST00000509490 SLC45A2Q9UMX9 530 aa7.6□□□□□ -1.19
PDGFRA-208ENST00000509490 POLR3KQ9Y2Y1 108 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms