RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 POU2AF1Q16633 256 aa11.76□□□□□ -0.53
RNF4-213ENST00000509388 PRSS8Q16651 343 aa11.76□□□□□ -0.53
RNF4-213ENST00000509388 TMEM268Q5VZI3 342 aa11.76□□□□□ -0.53
RNF4-213ENST00000509388 ZNF562Q6V9R5 426 aa11.76□□□□□ -0.53
RNF4-213ENST00000509388 DUSP18Q8NEJ0 188 aa11.76□□□□□ -0.53
RNF4-213ENST00000509388 TMEM167AQ8TBQ9 72 aa11.76□□□□□ -0.53
RNF4-213ENST00000509388 C19orf24Q9BVV8 132 aa11.76□□□□□ -0.53
RNF4-213ENST00000509388 ALX4Q9H161 411 aaPredicted RBP11.76□□□□□ -0.53
RNF4-213ENST00000509388 C16orf95Q9H693 158 aa11.76□□□□□ -0.53
RNF4-213ENST00000509388 TPSG1Q9NRR2 321 aa11.76□□□□□ -0.53
RNF4-213ENST00000509388 BET1LQ9NYM9 111 aa11.76□□□□□ -0.53
RNF4-213ENST00000509388 CLPSL1A2RUU4 121 aa11.75□□□□□ -0.53
RNF4-213ENST00000509388 RBMXL2O75526 392 aaKnown RBP11.75□□□□□ -0.53
RNF4-213ENST00000509388 PTTG1O95997 202 aa11.75□□□□□ -0.53
RNF4-213ENST00000509388 IGHG2P01859 326 aa11.75□□□□□ -0.53
RNF4-213ENST00000509388 SUPT4H1P63272 117 aaKnown RBP11.75□□□□□ -0.53
RNF4-213ENST00000509388 CX3CL1P78423 397 aa11.75□□□□□ -0.53
RNF4-213ENST00000509388 TMEM187Q14656 261 aa11.75□□□□□ -0.53
RNF4-213ENST00000509388 FXYD3Q14802 87 aa11.75□□□□□ -0.53
RNF4-213ENST00000509388 TNXAQ16473 311 aa11.75□□□□□ -0.53
RNF4-213ENST00000509388 Q6ZS46 218 aa11.75□□□□□ -0.53
RNF4-213ENST00000509388 SELENOHQ8IZQ5 122 aaKnown RBP11.75□□□□□ -0.53
RNF4-213ENST00000509388 PUSL1Q8N0Z8 303 aaKnown RBP11.75□□□□□ -0.53
RNF4-213ENST00000509388 Q8N2B8 174 aa11.75□□□□□ -0.53
RNF4-213ENST00000509388 OR4A16Q8NH70 328 aa11.75□□□□□ -0.53
RNF4-213ENST00000509388 LINC01006Q8NI28 216 aa11.75□□□□□ -0.53
RNF4-213ENST00000509388 COQ8AQ8NI60 647 aa11.75□□□□□ -0.53
RNF4-213ENST00000509388 RBPMSQ93062 196 aaKnown RBP11.75□□□□□ -0.53
RNF4-213ENST00000509388 IL22RA2Q969J5 263 aa11.75□□□□□ -0.53
RNF4-213ENST00000509388 TMEM56Q96MV1 263 aa11.75□□□□□ -0.53
RNF4-213ENST00000509388 HSPB9Q9BQS6 159 aa11.75□□□□□ -0.53
RNF4-213ENST00000509388 OR51J1Q9H342 316 aa11.75□□□□□ -0.53
RNF4-213ENST00000509388 ZNF430Q9H8G1 570 aaPredicted RBP11.75□□□□□ -0.53
RNF4-213ENST00000509388 PARP11Q9NR21 331 aa11.75□□□□□ -0.53
RNF4-213ENST00000509388 TMEM56-RWDD3S4R434 201 aa11.75□□□□□ -0.53
RNF4-213ENST00000509388 IGHV7-81A0A0B4J1V7 117 aa11.74□□□□□ -0.53
RNF4-213ENST00000509388 C9orf170A2RU37 121 aa11.74□□□□□ -0.53
RNF4-213ENST00000509388 TMEM89A2RUT3 159 aa11.74□□□□□ -0.53
RNF4-213ENST00000509388 INMT-MINDY4F8WBC2 141 aa11.74□□□□□ -0.53
RNF4-213ENST00000509388 HAX1O00165 279 aa11.74□□□□□ -0.53
RNF4-213ENST00000509388 AP4M1O00189 453 aa11.74□□□□□ -0.53
RNF4-213ENST00000509388 UPK2O00526 184 aa11.74□□□□□ -0.53
RNF4-213ENST00000509388 DHFRP00374 187 aa11.74□□□□□ -0.53
RNF4-213ENST00000509388 IGKV1-39P01597 117 aa11.74□□□□□ -0.53
RNF4-213ENST00000509388 IGKV1D-39P04432 117 aa11.74□□□□□ -0.53
RNF4-213ENST00000509388 RPL8P62917 257 aaKnown RBP11.74□□□□□ -0.53
RNF4-213ENST00000509388 PJVKQ0ZLH3 352 aa11.74□□□□□ -0.53
RNF4-213ENST00000509388 DHRS2Q13268 280 aa11.74□□□□□ -0.53
RNF4-213ENST00000509388 RGS21Q2M5E4 152 aa11.74□□□□□ -0.53
RNF4-213ENST00000509388 LYG2Q86SG7 212 aa11.74□□□□□ -0.53
RNF4-213ENST00000509388 GRPEL2Q8TAA5 225 aa11.74□□□□□ -0.53
RNF4-213ENST00000509388 SEC22AQ96IW7 307 aa11.74□□□□□ -0.53
RNF4-213ENST00000509388 PHB2Q99623 299 aa11.74□□□□□ -0.53
RNF4-213ENST00000509388 GON7Q9BXV9 100 aa11.74□□□□□ -0.53
RNF4-213ENST00000509388 PRR13Q9NZ81 148 aa11.74□□□□□ -0.53
RNF4-213ENST00000509388 RNF114Q9Y508 228 aa11.74□□□□□ -0.53
RNF4-213ENST00000509388 HLA-GP17693 338 aa11.73□□□□□ -0.53
RNF4-213ENST00000509388 MDKP21741 143 aaPredicted RBP11.73□□□□□ -0.53
RNF4-213ENST00000509388 VDAC1P21796 283 aa11.73□□□□□ -0.53
RNF4-213ENST00000509388 MAS1LP35410 378 aa11.73□□□□□ -0.53
RNF4-213ENST00000509388 TMEM267Q0VDI3 215 aaPredicted RBP11.73□□□□□ -0.53
RNF4-213ENST00000509388 ZFHX3Q15911 3703 aa11.73□□□□□ -0.53
RNF4-213ENST00000509388 TMEM95Q3KNT9 176 aa11.73□□□□□ -0.53
RNF4-213ENST00000509388 CENPVQ7Z7K6 275 aaPredicted RBP11.73□□□□□ -0.53
RNF4-213ENST00000509388 FAM219AQ8IW50 185 aa11.73□□□□□ -0.53
RNF4-213ENST00000509388 ARPC1AQ92747 370 aa11.73□□□□□ -0.53
RNF4-213ENST00000509388 COMMD5Q9GZQ3 224 aa11.73□□□□□ -0.53
RNF4-213ENST00000509388 GPN1Q9HCN4 374 aaPredicted RBP11.73□□□□□ -0.53
RNF4-213ENST00000509388 FKBP11Q9NYL4 201 aa11.73□□□□□ -0.53
RNF4-213ENST00000509388 PRNDQ9UKY0 176 aa11.73□□□□□ -0.53
RNF4-213ENST00000509388 MMP24Q9Y5R2 645 aa11.73□□□□□ -0.53
RNF4-213ENST00000509388 NF1P21359 2839 aa11.73□□□□□ -0.53
RNF4-213ENST00000509388 A0A0B4J2A0 478 aa11.72□□□□□ -0.53
RNF4-213ENST00000509388 LINC01548A6NM66 108 aa11.72□□□□□ -0.53
RNF4-213ENST00000509388 DUS4LO95620 317 aaKnown RBP11.72□□□□□ -0.53
RNF4-213ENST00000509388 IGKV1-5P01602 117 aa11.72□□□□□ -0.53
RNF4-213ENST00000509388 MECP2P51608 486 aaKnown RBP11.72□□□□□ -0.53
RNF4-213ENST00000509388 SLC35B1P78383 322 aa11.72□□□□□ -0.53
RNF4-213ENST00000509388 ANKRD55Q3KP44 614 aa11.72□□□□□ -0.53
RNF4-213ENST00000509388 CADM3Q8N126 398 aa11.72□□□□□ -0.53
RNF4-213ENST00000509388 SLC35G3Q8N808 338 aa11.72□□□□□ -0.53
RNF4-213ENST00000509388 LHFPL5Q8TAF8 219 aa11.72□□□□□ -0.53
RNF4-213ENST00000509388 CHPT1Q8WUD6 406 aa11.72□□□□□ -0.53
RNF4-213ENST00000509388 PDCD10Q9BUL8 212 aa11.72□□□□□ -0.53
RNF4-213ENST00000509388 SHPKQ9UHJ6 478 aa11.72□□□□□ -0.53
RNF4-213ENST00000509388 LINC00527Q9UJ94 153 aa11.72□□□□□ -0.53
RNF4-213ENST00000509388 NSG2Q9Y328 171 aa11.72□□□□□ -0.53
RNF4-213ENST00000509388 TRAV3A0A0B4J244 114 aa11.71□□□□□ -0.53
RNF4-213ENST00000509388 DUXBA0A1W2PPF3 345 aa11.71□□□□□ -0.53
RNF4-213ENST00000509388 ATP6V0E1O15342 81 aa11.71□□□□□ -0.53
RNF4-213ENST00000509388 PRAF2O60831 178 aa11.71□□□□□ -0.53
RNF4-213ENST00000509388 IFNA21P01568 189 aa11.71□□□□□ -0.53
RNF4-213ENST00000509388 OPN1MWP04001 364 aa11.71□□□□□ -0.53
RNF4-213ENST00000509388 IGF1P05019 195 aa11.71□□□□□ -0.53
RNF4-213ENST00000509388 IL5P05113 134 aa11.71□□□□□ -0.53
RNF4-213ENST00000509388 OR9G9P0C7N8 305 aa11.71□□□□□ -0.53
RNF4-213ENST00000509388 OPN1MW2P0DN77 364 aa11.71□□□□□ -0.53
RNF4-213ENST00000509388 OPN1MW3P0DN78 364 aa11.71□□□□□ -0.53
RNF4-213ENST00000509388 RPL27AP46776 148 aaKnown RBP11.71□□□□□ -0.53
RNF4-213ENST00000509388 COMPP49747 757 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms