RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 CASTOR1Q8WTX7 329 aa6.76□□□□□ -1.33
SNCA-211ENST00000508895 S100ZQ8WXG8 99 aa6.76□□□□□ -1.33
SNCA-211ENST00000508895 TMEM230Q96A57 120 aa6.76□□□□□ -1.33
SNCA-211ENST00000508895 RAX2Q96IS3 184 aa6.76□□□□□ -1.33
SNCA-211ENST00000508895 CCDC32Q9BV29 185 aa6.76□□□□□ -1.33
SNCA-211ENST00000508895 COMMD9Q9P000 198 aa6.76□□□□□ -1.33
SNCA-211ENST00000508895 TSSC4Q9Y5U2 329 aaPredicted RBP6.76□□□□□ -1.33
SNCA-211ENST00000508895 WSB1Q9Y6I7 421 aa6.76□□□□□ -1.33
SNCA-211ENST00000508895 H0Y980 276 aa6.75□□□□□ -1.33
SNCA-211ENST00000508895 AP4M1O00189 453 aa6.75□□□□□ -1.33
SNCA-211ENST00000508895 ARPC1BO15143 372 aaKnown RBP6.75□□□□□ -1.33
SNCA-211ENST00000508895 MPPED1O15442 326 aa6.75□□□□□ -1.33
SNCA-211ENST00000508895 SOX15O60248 233 aa6.75□□□□□ -1.33
SNCA-211ENST00000508895 KBTBD11O94819 623 aa6.75□□□□□ -1.33
SNCA-211ENST00000508895 HPRT1P00492 218 aa6.75□□□□□ -1.33
SNCA-211ENST00000508895 IGKV1-39P01597 117 aa6.75□□□□□ -1.33
SNCA-211ENST00000508895 IGKV1D-39P04432 117 aa6.75□□□□□ -1.33
SNCA-211ENST00000508895 IGF1P05019 195 aa6.75□□□□□ -1.33
SNCA-211ENST00000508895 PPIFP30405 207 aaKnown RBP6.75□□□□□ -1.33
SNCA-211ENST00000508895 CRIP2P52943 208 aaPredicted RBP6.75□□□□□ -1.33
SNCA-211ENST00000508895 TAS2R31P59538 309 aa6.75□□□□□ -1.33
SNCA-211ENST00000508895 CX3CL1P78423 397 aa6.75□□□□□ -1.33
SNCA-211ENST00000508895 VMA21Q3ZAQ7 101 aa6.75□□□□□ -1.33
SNCA-211ENST00000508895 C10orf55Q5SWW7 151 aa6.75□□□□□ -1.33
SNCA-211ENST00000508895 ASPHD1Q5U4P2 390 aa6.75□□□□□ -1.33
SNCA-211ENST00000508895 OR4A47Q6IF82 309 aa6.75□□□□□ -1.33
SNCA-211ENST00000508895 SSX9Q7RTT3 188 aa6.75□□□□□ -1.33
SNCA-211ENST00000508895 MRPL41Q8IXM3 137 aaKnown RBP6.75□□□□□ -1.33
SNCA-211ENST00000508895 PUSL1Q8N0Z8 303 aaKnown RBP6.75□□□□□ -1.33
SNCA-211ENST00000508895 TEX45Q8NA69 505 aa6.75□□□□□ -1.33
SNCA-211ENST00000508895 RHOVQ96L33 236 aa6.75□□□□□ -1.33
SNCA-211ENST00000508895 TP53RKQ96S44 253 aa6.75□□□□□ -1.33
SNCA-211ENST00000508895 CLCC1Q96S66 551 aa6.75□□□□□ -1.33
SNCA-211ENST00000508895 P2RX4Q99571 388 aa6.75□□□□□ -1.33
SNCA-211ENST00000508895 RTBDNQ9BSG5 229 aaPredicted RBP6.75□□□□□ -1.33
SNCA-211ENST00000508895 WDR12Q9GZL7 423 aaKnown RBP6.75□□□□□ -1.33
SNCA-211ENST00000508895 OR51J1Q9H342 316 aa6.75□□□□□ -1.33
SNCA-211ENST00000508895 ZNF430Q9H8G1 570 aaPredicted RBP6.75□□□□□ -1.33
SNCA-211ENST00000508895 PLEKHA2Q9HB19 425 aa6.75□□□□□ -1.33
SNCA-211ENST00000508895 PARP11Q9NR21 331 aa6.75□□□□□ -1.33
SNCA-211ENST00000508895 SCP2D1Q9UJQ7 156 aa6.75□□□□□ -1.33
SNCA-211ENST00000508895 ZNF580Q9UK33 172 aa6.75□□□□□ -1.33
SNCA-211ENST00000508895 GPR132Q9UNW8 380 aa6.75□□□□□ -1.33
SNCA-211ENST00000508895 LINC00854A0A1B0GVQ3 168 aa6.74□□□□□ -1.33
SNCA-211ENST00000508895 CRYM-AS1A6NIL9 109 aa6.74□□□□□ -1.33
SNCA-211ENST00000508895 MARCH11A6NNE9 402 aa6.74□□□□□ -1.33
SNCA-211ENST00000508895 PLA2G10O15496 165 aa6.74□□□□□ -1.33
SNCA-211ENST00000508895 S100GP29377 79 aa6.74□□□□□ -1.33
SNCA-211ENST00000508895 HOXD3P31249 432 aaPredicted RBP6.74□□□□□ -1.33
SNCA-211ENST00000508895 INPP1P49441 399 aa6.74□□□□□ -1.33
SNCA-211ENST00000508895 CCR6P51684 374 aa6.74□□□□□ -1.33
SNCA-211ENST00000508895 ZNF846Q147U1 533 aa6.74□□□□□ -1.33
SNCA-211ENST00000508895 PRSS8Q16651 343 aa6.74□□□□□ -1.33
SNCA-211ENST00000508895 ECSCRQ19T08 205 aa6.74□□□□□ -1.33
SNCA-211ENST00000508895 LIN54Q6MZP7 749 aa6.74□□□□□ -1.33
SNCA-211ENST00000508895 FOXRED2Q8IWF2 684 aa6.74□□□□□ -1.33
SNCA-211ENST00000508895 TCTEX1D1Q8N7M0 179 aa6.74□□□□□ -1.33
SNCA-211ENST00000508895 CCDC71LQ8N9Z2 235 aa6.74□□□□□ -1.33
SNCA-211ENST00000508895 POC5Q8NA72 575 aa6.74□□□□□ -1.33
SNCA-211ENST00000508895 ADAD2Q8NCV1 583 aaKnown RBP6.74□□□□□ -1.33
SNCA-211ENST00000508895 KLHL30-AS1Q8NEE0 82 aa6.74□□□□□ -1.33
SNCA-211ENST00000508895 OR4F17Q8NGA8 305 aa6.74□□□□□ -1.33
SNCA-211ENST00000508895 OR4X2Q8NGF9 303 aa6.74□□□□□ -1.33
SNCA-211ENST00000508895 GRPEL2Q8TAA5 225 aa6.74□□□□□ -1.33
SNCA-211ENST00000508895 LHFPL5Q8TAF8 219 aa6.74□□□□□ -1.33
SNCA-211ENST00000508895 TMEM167AQ8TBQ9 72 aa6.74□□□□□ -1.33
SNCA-211ENST00000508895 ZFAND1Q8TCF1 268 aa6.74□□□□□ -1.33
SNCA-211ENST00000508895 CD300LFQ8TDQ1 290 aa6.74□□□□□ -1.33
SNCA-211ENST00000508895 CHPT1Q8WUD6 406 aa6.74□□□□□ -1.33
SNCA-211ENST00000508895 ARPC1AQ92747 370 aa6.74□□□□□ -1.33
SNCA-211ENST00000508895 OR4F4Q96R69 305 aa6.74□□□□□ -1.33
SNCA-211ENST00000508895 FAM103A1Q9BTL3 118 aaKnown RBP6.74□□□□□ -1.33
SNCA-211ENST00000508895 NAA60Q9H7X0 242 aa6.74□□□□□ -1.33
SNCA-211ENST00000508895 GNB4Q9HAV0 340 aa6.74□□□□□ -1.33
SNCA-211ENST00000508895 FAM212BQ9NTI7 297 aaPredicted RBP6.74□□□□□ -1.33
SNCA-211ENST00000508895 TMEM140Q9NV12 185 aa6.74□□□□□ -1.33
SNCA-211ENST00000508895 AURKAIP1Q9NWT8 199 aaPredicted RBP6.74□□□□□ -1.33
SNCA-211ENST00000508895 BET1LQ9NYM9 111 aa6.74□□□□□ -1.33
SNCA-211ENST00000508895 COPZ2Q9P299 210 aa6.74□□□□□ -1.33
SNCA-211ENST00000508895 TBC1D24Q9ULP9 559 aa6.74□□□□□ -1.33
SNCA-211ENST00000508895 C14orf166Q9Y224 244 aaKnown RBP6.74□□□□□ -1.33
SNCA-211ENST00000508895 TRAV3A0A0B4J244 114 aa6.73□□□□□ -1.33
SNCA-211ENST00000508895 C3orf85A0A1B0GTC6 90 aa6.73□□□□□ -1.33
SNCA-211ENST00000508895 A0A1B0GW64 132 aa6.73□□□□□ -1.33
SNCA-211ENST00000508895 WI2-2373I1.2A0A1W2PRP0 233 aa6.73□□□□□ -1.33
SNCA-211ENST00000508895 NAP1L6A6NFF2 107 aa6.73□□□□□ -1.33
SNCA-211ENST00000508895 K7EIL1 84 aa6.73□□□□□ -1.33
SNCA-211ENST00000508895 LYRM1O43325 122 aa6.73□□□□□ -1.33
SNCA-211ENST00000508895 OR2A4O95047 310 aa6.73□□□□□ -1.33
SNCA-211ENST00000508895 HRASP01112 189 aa6.73□□□□□ -1.33
SNCA-211ENST00000508895 IGHG4P01861 327 aa6.73□□□□□ -1.33
SNCA-211ENST00000508895 OR5AC1P0C628 307 aa6.73□□□□□ -1.33
SNCA-211ENST00000508895 P0C879 139 aa6.73□□□□□ -1.33
SNCA-211ENST00000508895 MYOD1P15172 320 aa6.73□□□□□ -1.33
SNCA-211ENST00000508895 RPA2P15927 270 aa6.73□□□□□ -1.33
SNCA-211ENST00000508895 NQO2P16083 231 aa6.73□□□□□ -1.33
SNCA-211ENST00000508895 UCP1P25874 307 aa6.73□□□□□ -1.33
SNCA-211ENST00000508895 PSMB8P28062 276 aa6.73□□□□□ -1.33
SNCA-211ENST00000508895 G6PCP35575 357 aa6.73□□□□□ -1.33
SNCA-211ENST00000508895 LPAR6P43657 344 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms