RNA–Protein interactions for RNA: ENST00000508550.5

CCSER1-207, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 716 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-207ENST00000508550 LHX4Q969G2 390 aa6.56□□□□□ -1.36
CCSER1-207ENST00000508550 FLYWCH2Q96CP2 140 aaKnown RBP6.56□□□□□ -1.36
CCSER1-207ENST00000508550 GNPNAT1Q96EK6 184 aaPredicted RBP6.56□□□□□ -1.36
CCSER1-207ENST00000508550 C1orf159Q96HA4 380 aa6.56□□□□□ -1.36
CCSER1-207ENST00000508550 TSNAXQ99598 290 aaKnown RBP6.56□□□□□ -1.36
CCSER1-207ENST00000508550 CCL19Q99731 98 aa6.56□□□□□ -1.36
CCSER1-207ENST00000508550 SRSF8Q9BRL6 282 aaKnown RBP6.56□□□□□ -1.36
CCSER1-207ENST00000508550 GINS3Q9BRX5 216 aa6.56□□□□□ -1.36
CCSER1-207ENST00000508550 ZNF471Q9BX82 626 aaPredicted RBP6.56□□□□□ -1.36
CCSER1-207ENST00000508550 TMEM14BQ9NUH8 114 aa6.56□□□□□ -1.36
CCSER1-207ENST00000508550 LSM5Q9Y4Y9 91 aaKnown RBP6.56□□□□□ -1.36
CCSER1-207ENST00000508550 ABCA4P78363 2273 aa6.56□□□□□ -1.36
CCSER1-207ENST00000508550 MYO18BQ8IUG5 2567 aa6.56□□□□□ -1.36
CCSER1-207ENST00000508550 SPTBN1Q01082 2364 aaKnown RBP6.55□□□□□ -1.36
CCSER1-207ENST00000508550 ZNF462Q96JM2 2506 aa6.55□□□□□ -1.36
CCSER1-207ENST00000508550 A0A0G2JRQ6 117 aa6.55□□□□□ -1.36
CCSER1-207ENST00000508550 C15orf61A6NNL5 157 aa6.55□□□□□ -1.36
CCSER1-207ENST00000508550 LEUTXA8MZ59 168 aa6.55□□□□□ -1.36
CCSER1-207ENST00000508550 LY6LH3BQJ8 138 aa6.55□□□□□ -1.36
CCSER1-207ENST00000508550 BUB1B-PAK6H3BSN5 160 aa6.55□□□□□ -1.36
CCSER1-207ENST00000508550 TRIM77I1YAP6 450 aa6.55□□□□□ -1.36
CCSER1-207ENST00000508550 SLC31A2O15432 143 aa6.55□□□□□ -1.36
CCSER1-207ENST00000508550 FGF16O43320 207 aa6.55□□□□□ -1.36
CCSER1-207ENST00000508550 MMP23AO75900 390 aa6.55□□□□□ -1.36
CCSER1-207ENST00000508550 KRASP01116 189 aa6.55□□□□□ -1.36
CCSER1-207ENST00000508550 CCL3L1P16619 93 aa6.55□□□□□ -1.36
CCSER1-207ENST00000508550 MAS1LP35410 378 aa6.55□□□□□ -1.36
CCSER1-207ENST00000508550 PAX9P55771 341 aa6.55□□□□□ -1.36
CCSER1-207ENST00000508550 HSPE1P61604 102 aaKnown RBP6.55□□□□□ -1.36
CCSER1-207ENST00000508550 POLR2GP62487 172 aaKnown RBP eCLIP6.55□□□□□ -1.36
CCSER1-207ENST00000508550 EWSR1Q01844 656 aaKnown RBP eCLIP6.55□□□□□ -1.36
CCSER1-207ENST00000508550 PAX2Q02962 417 aa6.55□□□□□ -1.36
CCSER1-207ENST00000508550 SP5Q6BEB4 398 aaPredicted RBP6.55□□□□□ -1.36
CCSER1-207ENST00000508550 DPPA3Q6W0C5 159 aa6.55□□□□□ -1.36
CCSER1-207ENST00000508550 HSD17B13Q7Z5P4 300 aaPredicted RBP6.55□□□□□ -1.36
CCSER1-207ENST00000508550 TGIF2LXQ8IUE1 241 aa6.55□□□□□ -1.36
CCSER1-207ENST00000508550 PDZD9Q8IXQ8 264 aa6.55□□□□□ -1.36
CCSER1-207ENST00000508550 TEX45Q8NA69 505 aa6.55□□□□□ -1.36
CCSER1-207ENST00000508550 OR4A16Q8NH70 328 aa6.55□□□□□ -1.36
CCSER1-207ENST00000508550 UBALD1Q8TB05 177 aa6.55□□□□□ -1.36
CCSER1-207ENST00000508550 PINX1Q96BK5 328 aaKnown RBP6.55□□□□□ -1.36
CCSER1-207ENST00000508550 CLCC1Q96S66 551 aa6.55□□□□□ -1.36
CCSER1-207ENST00000508550 NABP2Q9BQ15 211 aa6.55□□□□□ -1.36
CCSER1-207ENST00000508550 PIMREGQ9BSJ6 248 aa6.55□□□□□ -1.36
CCSER1-207ENST00000508550 ZC4H2Q9NQZ6 224 aa6.55□□□□□ -1.36
CCSER1-207ENST00000508550 SLC35D1Q9NTN3 355 aa6.55□□□□□ -1.36
CCSER1-207ENST00000508550 WASHC3Q9Y3C0 194 aa6.55□□□□□ -1.36
CCSER1-207ENST00000508550 TBL2Q9Y4P3 447 aaKnown RBP6.55□□□□□ -1.36
CCSER1-207ENST00000508550 DIDO1Q9BTC0 2240 aaKnown RBP6.55□□□□□ -1.36
CCSER1-207ENST00000508550 HCFC1P51610 2035 aa6.55□□□□□ -1.36
CCSER1-207ENST00000508550 ARFGEF3Q5TH69 2177 aa6.54□□□□□ -1.36
CCSER1-207ENST00000508550 RPS10-NUDT3A0A1W2PQS6 291 aa6.54□□□□□ -1.36
CCSER1-207ENST00000508550 MSGN1A6NI15 193 aa6.54□□□□□ -1.36
CCSER1-207ENST00000508550 ODF3BA8MYP8 253 aa6.54□□□□□ -1.36
CCSER1-207ENST00000508550 VWC2LB2RUY7 222 aa6.54□□□□□ -1.36
CCSER1-207ENST00000508550 SCGB1D2O95969 90 aa6.54□□□□□ -1.36
CCSER1-207ENST00000508550 CFDP00746 253 aaPredicted RBP6.54□□□□□ -1.36
CCSER1-207ENST00000508550 ARG1P05089 322 aa6.54□□□□□ -1.36
CCSER1-207ENST00000508550 SPP1P10451 314 aa6.54□□□□□ -1.36
CCSER1-207ENST00000508550 SLC25A16P16260 332 aa6.54□□□□□ -1.36
CCSER1-207ENST00000508550 USF1P22415 310 aaPredicted RBP6.54□□□□□ -1.36
CCSER1-207ENST00000508550 CD1BP29016 333 aa6.54□□□□□ -1.36
CCSER1-207ENST00000508550 G6PCP35575 357 aa6.54□□□□□ -1.36
CCSER1-207ENST00000508550 HTR2BP41595 481 aa6.54□□□□□ -1.36
CCSER1-207ENST00000508550 CAV2P51636 162 aa6.54□□□□□ -1.36
CCSER1-207ENST00000508550 LMO4P61968 165 aa6.54□□□□□ -1.36
CCSER1-207ENST00000508550 BLOC1S1P78537 153 aa6.54□□□□□ -1.36
CCSER1-207ENST00000508550 SERF2P84101 59 aa6.54□□□□□ -1.36
CCSER1-207ENST00000508550 LTC4SQ16873 150 aa6.54□□□□□ -1.36
CCSER1-207ENST00000508550 RPL39P5Q59GN2 51 aa6.54□□□□□ -1.36
CCSER1-207ENST00000508550 CLEC2AQ6UVW9 174 aa6.54□□□□□ -1.36
CCSER1-207ENST00000508550 PRSS57Q6UWY2 283 aa6.54□□□□□ -1.36
CCSER1-207ENST00000508550 BTNL3Q6UXE8 466 aa6.54□□□□□ -1.36
CCSER1-207ENST00000508550 CENPVQ7Z7K6 275 aaPredicted RBP6.54□□□□□ -1.36
CCSER1-207ENST00000508550 COMMD1Q8N668 190 aa6.54□□□□□ -1.36
CCSER1-207ENST00000508550 OR1S2Q8NGQ3 325 aa6.54□□□□□ -1.36
CCSER1-207ENST00000508550 DTD1Q8TEA8 209 aa6.54□□□□□ -1.36
CCSER1-207ENST00000508550 C10orf105Q8TEF2 133 aa6.54□□□□□ -1.36
CCSER1-207ENST00000508550 LPAR2Q9HBW0 351 aa6.54□□□□□ -1.36
CCSER1-207ENST00000508550 TMEM140Q9NV12 185 aa6.54□□□□□ -1.36
CCSER1-207ENST00000508550 BEX4Q9NWD9 120 aaPredicted RBP6.54□□□□□ -1.36
CCSER1-207ENST00000508550 PSENENQ9NZ42 101 aa6.54□□□□□ -1.36
CCSER1-207ENST00000508550 DPM3Q9P2X0 92 aa6.54□□□□□ -1.36
CCSER1-207ENST00000508550 FBXL17Q9UF56 701 aa6.54□□□□□ -1.36
CCSER1-207ENST00000508550 STRAPQ9Y3F4 350 aaKnown RBP6.54□□□□□ -1.36
CCSER1-207ENST00000508550 CACNA1DQ01668 2161 aa6.54□□□□□ -1.36
CCSER1-207ENST00000508550 PKDREJQ9NTG1 2253 aa6.53□□□□□ -1.36
CCSER1-207ENST00000508550 DYSFO75923 2080 aa6.53□□□□□ -1.36
CCSER1-207ENST00000508550 USP9XQ93008 2570 aaPredicted RBP6.53□□□□□ -1.36
CCSER1-207ENST00000508550 IGHV2-70DA0A0C4DH43 119 aa6.53□□□□□ -1.36
CCSER1-207ENST00000508550 A0A1W2PN81 502 aa6.53□□□□□ -1.36
CCSER1-207ENST00000508550 C22orf46C9J442 243 aa6.53□□□□□ -1.36
CCSER1-207ENST00000508550 LYNX1G3V0Z9 82 aa6.53□□□□□ -1.36
CCSER1-207ENST00000508550 UPK2O00526 184 aa6.53□□□□□ -1.36
CCSER1-207ENST00000508550 SSSCA1O60232 199 aa6.53□□□□□ -1.36
CCSER1-207ENST00000508550 MPDU1O75352 247 aa6.53□□□□□ -1.36
CCSER1-207ENST00000508550 NDUFS6O75380 124 aaKnown RBP6.53□□□□□ -1.36
CCSER1-207ENST00000508550 CRYZL1O95825 349 aa6.53□□□□□ -1.36
CCSER1-207ENST00000508550 IFNA5P01569 189 aa6.53□□□□□ -1.36
CCSER1-207ENST00000508550 IGHV4-39P01824 125 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms