RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 MOB1BQ7L9L4 216 aa5.91□□□□□ -1.46
PDGFRA-206ENST00000508170 SLC35E3Q7Z769 313 aa5.91□□□□□ -1.46
PDGFRA-206ENST00000508170 ZNRF4Q8WWF5 429 aa5.91□□□□□ -1.46
PDGFRA-206ENST00000508170 TMEM106AQ96A25 262 aa5.91□□□□□ -1.46
PDGFRA-206ENST00000508170 ADAT1Q9BUB4 502 aaKnown RBP5.91□□□□□ -1.46
PDGFRA-206ENST00000508170 PLAC1Q9HBJ0 212 aa5.91□□□□□ -1.46
PDGFRA-206ENST00000508170 RNF11Q9Y3C5 154 aa5.91□□□□□ -1.46
PDGFRA-206ENST00000508170 COX11Q9Y6N1 276 aa5.91□□□□□ -1.46
PDGFRA-206ENST00000508170 DENND4AQ7Z401 1863 aa5.91□□□□□ -1.46
PDGFRA-206ENST00000508170 RLFQ13129 1914 aa5.91□□□□□ -1.46
PDGFRA-206ENST00000508170 J3QRK9 145 aa5.9□□□□□ -1.46
PDGFRA-206ENST00000508170 NPFFO15130 113 aa5.9□□□□□ -1.46
PDGFRA-206ENST00000508170 IGLV1-40P01703 118 aa5.9□□□□□ -1.46
PDGFRA-206ENST00000508170 MT-ND4LP03901 98 aa5.9□□□□□ -1.46
PDGFRA-206ENST00000508170 APODP05090 189 aa5.9□□□□□ -1.46
PDGFRA-206ENST00000508170 CRYBA1P05813 215 aa5.9□□□□□ -1.46
PDGFRA-206ENST00000508170 GPX1P07203 203 aa5.9□□□□□ -1.46
PDGFRA-206ENST00000508170 CRHBPP24387 322 aa5.9□□□□□ -1.46
PDGFRA-206ENST00000508170 RPL22P35268 128 aaKnown RBP5.9□□□□□ -1.46
PDGFRA-206ENST00000508170 CCR2P41597 374 aa5.9□□□□□ -1.46
PDGFRA-206ENST00000508170 LPAR6P43657 344 aa5.9□□□□□ -1.46
PDGFRA-206ENST00000508170 SELENOPP49908 381 aa5.9□□□□□ -1.46
PDGFRA-206ENST00000508170 NUDT2P50583 147 aa5.9□□□□□ -1.46
PDGFRA-206ENST00000508170 CCL23P55773 120 aa5.9□□□□□ -1.46
PDGFRA-206ENST00000508170 RPS23P62266 143 aaKnown RBP5.9□□□□□ -1.46
PDGFRA-206ENST00000508170 LYRM7Q5U5X0 104 aa5.9□□□□□ -1.46
PDGFRA-206ENST00000508170 C6orf223Q8N319 242 aa5.9□□□□□ -1.46
PDGFRA-206ENST00000508170 FER1L6-AS1Q8NA97 138 aa5.9□□□□□ -1.46
PDGFRA-206ENST00000508170 ZNF114Q8NC26 417 aa5.9□□□□□ -1.46
PDGFRA-206ENST00000508170 OR4S1Q8NGB4 309 aa5.9□□□□□ -1.46
PDGFRA-206ENST00000508170 MARCH5Q9NX47 278 aa5.9□□□□□ -1.46
PDGFRA-206ENST00000508170 NEUROG3Q9Y4Z2 214 aa5.9□□□□□ -1.46
PDGFRA-206ENST00000508170 COL11A1P12107 1806 aaPredicted RBP5.9□□□□□ -1.46
PDGFRA-206ENST00000508170 PHF3Q92576 2039 aaKnown RBP5.9□□□□□ -1.47
PDGFRA-206ENST00000508170 SIP14410 1827 aa5.9□□□□□ -1.47
PDGFRA-206ENST00000508170 A0A0B4J2A0 478 aa5.9□□□□□ -1.47
PDGFRA-206ENST00000508170 TNFSF13O75888 250 aa5.9□□□□□ -1.47
PDGFRA-206ENST00000508170 JTBO76095 146 aa5.9□□□□□ -1.47
PDGFRA-206ENST00000508170 RPS4Y1P22090 263 aaKnown RBP5.9□□□□□ -1.47
PDGFRA-206ENST00000508170 CRYBA2P53672 197 aa5.9□□□□□ -1.47
PDGFRA-206ENST00000508170 RBM11P57052 281 aaKnown RBP5.9□□□□□ -1.47
PDGFRA-206ENST00000508170 HERPUD1Q15011 391 aa5.9□□□□□ -1.47
PDGFRA-206ENST00000508170 TMEM236Q5W0B7 351 aa5.9□□□□□ -1.47
PDGFRA-206ENST00000508170 OR5AP2Q8NGF4 316 aa5.9□□□□□ -1.47
PDGFRA-206ENST00000508170 ZNF420Q8TAQ5 688 aaPredicted RBP5.9□□□□□ -1.47
PDGFRA-206ENST00000508170 LINC01587Q99440 93 aa5.9□□□□□ -1.47
PDGFRA-206ENST00000508170 ZNF471Q9BX82 626 aaPredicted RBP5.9□□□□□ -1.47
PDGFRA-206ENST00000508170 TVP23BQ9NYZ1 205 aa5.9□□□□□ -1.47
PDGFRA-206ENST00000508170 SHPKQ9UHJ6 478 aa5.9□□□□□ -1.47
PDGFRA-206ENST00000508170 SIGLEC7Q9Y286 467 aa5.9□□□□□ -1.47
PDGFRA-206ENST00000508170 AP4S1Q9Y587 144 aa5.9□□□□□ -1.47
PDGFRA-206ENST00000508170 SOX21Q9Y651 276 aaPredicted RBP5.9□□□□□ -1.47
PDGFRA-206ENST00000508170 A0A087WXM4 84 aa5.89□□□□□ -1.47
PDGFRA-206ENST00000508170 IGHV3OR16-9A0A0B4J2B5 98 aa5.89□□□□□ -1.47
PDGFRA-206ENST00000508170 TMEM269A0A1B0GVZ9 245 aa5.89□□□□□ -1.47
PDGFRA-206ENST00000508170 IFNA7P01567 189 aa5.89□□□□□ -1.47
PDGFRA-206ENST00000508170 NDUFA6P56556 154 aa5.89□□□□□ -1.47
PDGFRA-206ENST00000508170 MLF2Q15773 248 aaPredicted RBP5.89□□□□□ -1.47
PDGFRA-206ENST00000508170 ACP7Q6ZNF0 438 aa5.89□□□□□ -1.47
PDGFRA-206ENST00000508170 C5orf17Q8NAS9 161 aa5.89□□□□□ -1.47
PDGFRA-206ENST00000508170 NUP35Q8NFH5 326 aa5.89□□□□□ -1.47
PDGFRA-206ENST00000508170 OR10J6PQ8NGY7 276 aa5.89□□□□□ -1.47
PDGFRA-206ENST00000508170 SLC25A40Q8TBP6 338 aa5.89□□□□□ -1.47
PDGFRA-206ENST00000508170 IGF2BP2-AS1Q96M15 143 aa5.89□□□□□ -1.47
PDGFRA-206ENST00000508170 SRXN1Q9BYN0 137 aa5.89□□□□□ -1.47
PDGFRA-206ENST00000508170 TMEM216Q9P0N5 145 aa5.89□□□□□ -1.47
PDGFRA-206ENST00000508170 J3QQQ9 107 aa5.89□□□□□ -1.47
PDGFRA-206ENST00000508170 SS18L1O75177 396 aaPredicted RBP5.89□□□□□ -1.47
PDGFRA-206ENST00000508170 SRSF10O75494 262 aaKnown RBP5.89□□□□□ -1.47
PDGFRA-206ENST00000508170 BCL2P10415 239 aa5.89□□□□□ -1.47
PDGFRA-206ENST00000508170 GFERP55789 205 aa5.89□□□□□ -1.47
PDGFRA-206ENST00000508170 FAM74A1Q5RGS3 127 aa5.89□□□□□ -1.47
PDGFRA-206ENST00000508170 TMEM244Q5VVB8 128 aa5.89□□□□□ -1.47
PDGFRA-206ENST00000508170 ZNF493Q6ZR52 646 aa5.89□□□□□ -1.47
PDGFRA-206ENST00000508170 LINC00052Q96N35 136 aa5.89□□□□□ -1.47
PDGFRA-206ENST00000508170 CXorf21Q9HAI6 301 aa5.89□□□□□ -1.47
PDGFRA-206ENST00000508170 IL36RNQ9UBH0 155 aa5.89□□□□□ -1.47
PDGFRA-206ENST00000508170 PCYT1BQ9Y5K3 369 aaPredicted RBP5.89□□□□□ -1.47
PDGFRA-206ENST00000508170 DOCK1Q14185 1865 aa5.88□□□□□ -1.47
PDGFRA-206ENST00000508170 VWA8A3KMH1 1905 aa5.88□□□□□ -1.47
PDGFRA-206ENST00000508170 PHIPQ8WWQ0 1821 aa5.88□□□□□ -1.47
PDGFRA-206ENST00000508170 TRAV4A0A0B4J268 109 aa5.88□□□□□ -1.47
PDGFRA-206ENST00000508170 H0YJW9 148 aa5.88□□□□□ -1.47
PDGFRA-206ENST00000508170 RNASE1P07998 156 aaKnown RBP5.88□□□□□ -1.47
PDGFRA-206ENST00000508170 ERGP11308 486 aa5.88□□□□□ -1.47
PDGFRA-206ENST00000508170 FKBP2P26885 142 aaKnown RBP5.88□□□□□ -1.47
PDGFRA-206ENST00000508170 Q499Y3 187 aa5.88□□□□□ -1.47
PDGFRA-206ENST00000508170 CLEC20AQ6ZU45 233 aa5.88□□□□□ -1.47
PDGFRA-206ENST00000508170 ZNF664Q8N3J9 261 aa5.88□□□□□ -1.47
PDGFRA-206ENST00000508170 PACRGLQ8N7B6 248 aa5.88□□□□□ -1.47
PDGFRA-206ENST00000508170 TEX37Q96LM6 180 aa5.88□□□□□ -1.47
PDGFRA-206ENST00000508170 AP1S3Q96PC3 154 aa5.88□□□□□ -1.47
PDGFRA-206ENST00000508170 OR4C12Q96R67 309 aa5.88□□□□□ -1.47
PDGFRA-206ENST00000508170 DERL1Q9BUN8 251 aa5.88□□□□□ -1.47
PDGFRA-206ENST00000508170 SFXN3Q9BWM7 321 aa5.88□□□□□ -1.47
PDGFRA-206ENST00000508170 TMEM133Q9H2Q1 129 aa5.88□□□□□ -1.47
PDGFRA-206ENST00000508170 MOB1AQ9H8S9 216 aa5.88□□□□□ -1.47
PDGFRA-206ENST00000508170 PCNTO95613 3336 aa5.88□□□□□ -1.47
PDGFRA-206ENST00000508170 IGKV6D-21A0A0A0MT36 114 aa5.87□□□□□ -1.47
PDGFRA-206ENST00000508170 TRAPPC2P0DI81 140 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms