RNA–Protein interactions for RNA: ENST00000508049.1

CLOCK-207, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-207ENST00000508049 MITD1Q8WV92 249 aa-0.48□□□□□ -2.49
CLOCK-207ENST00000508049 ACOT12Q8WYK0 555 aa-0.48□□□□□ -2.49
CLOCK-207ENST00000508049 RORBQ92753 470 aa-0.48□□□□□ -2.49
CLOCK-207ENST00000508049 CDKL2Q92772 493 aa-0.48□□□□□ -2.49
CLOCK-207ENST00000508049 TOP1MTQ969P6 601 aa-0.48□□□□□ -2.49
CLOCK-207ENST00000508049 MS4A6EQ96DS6 147 aa-0.48□□□□□ -2.49
CLOCK-207ENST00000508049 ZC2HC1AQ96GY0 325 aa-0.48□□□□□ -2.49
CLOCK-207ENST00000508049 NMNAT3Q96T66 252 aa-0.48□□□□□ -2.49
CLOCK-207ENST00000508049 SYT4Q9H2B2 425 aa-0.48□□□□□ -2.49
CLOCK-207ENST00000508049 SPACA1Q9HBV2 294 aa-0.48□□□□□ -2.49
CLOCK-207ENST00000508049 XAGE1AQ9HD64 81 aa-0.48□□□□□ -2.49
CLOCK-207ENST00000508049 CD300AQ9UGN4 299 aa-0.48□□□□□ -2.49
CLOCK-207ENST00000508049 NAT8Q9UHE5 227 aa-0.48□□□□□ -2.49
CLOCK-207ENST00000508049 HPCAL4Q9UM19 191 aa-0.48□□□□□ -2.49
CLOCK-207ENST00000508049 TIMM22Q9Y584 194 aa-0.48□□□□□ -2.49
CLOCK-207ENST00000508049 PHLPP2Q6ZVD8 1323 aa-0.48□□□□□ -2.49
CLOCK-207ENST00000508049 MYLKQ15746 1914 aa-0.48□□□□□ -2.49
CLOCK-207ENST00000508049 ATG2AQ2TAZ0 1938 aa-0.48□□□□□ -2.49
CLOCK-207ENST00000508049 NCOR1O75376 2440 aa-0.48□□□□□ -2.49
CLOCK-207ENST00000508049 FAM208BQ5VWN6 2430 aa-0.48□□□□□ -2.49
CLOCK-207ENST00000508049 NUP153P49790 1475 aaKnown RBP-0.48□□□□□ -2.49
CLOCK-207ENST00000508049 FLNAP21333 2647 aaKnown RBP-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 PDZD2O15018 2839 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 HECTD4Q9Y4D8 3996 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 SYNJ2BP-COX16A0A087WUM0 186 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 FUOMA2VDF0 154 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 OR2T8A6NH00 312 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 SUPT3HB4E1H0 165 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 M0R381 172 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 MRASO14807 208 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 CASQ2O14958 399 aaPredicted RBP-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 SLC22A1O15245 554 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 FABP7O15540 132 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 CYTH3O43739 400 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 SYNGR1O43759 233 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 SC5DO75845 299 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 ZNF682O95780 498 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 HLA-DQB2P05538 268 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 CTSDP07339 412 aaPredicted RBP-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 MIFP14174 115 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 HIST1H1CP16403 213 aaKnown RBP-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 BGNP21810 368 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 MSNP26038 577 aaKnown RBP-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 SPINT3P49223 89 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 ZNF80P51504 273 aaPredicted RBP-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 DYNLL1P63167 89 aaKnown RBP-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 HLA-DRB3P79483 266 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 QRFPP83859 136 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 BSXQ3C1V8 233 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 HIKESHIQ53FT3 197 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 CLEC2AQ6UVW9 174 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 LINC00322Q6ZN03 302 aaPredicted RBP-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 C10orf67Q8IYJ2 551 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 LINC00311Q8N616 119 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 ARL6IP6Q8N6S5 226 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 ZNF321PQ8N8H1 164 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 PLPP5Q8NEB5 264 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 OR2Y1Q8NGV0 311 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 LGALS14Q8TCE9 139 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 TMEM239Q8WW34 195 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 MRAP2Q96G30 205 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 OR7D2Q96RA2 312 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 MYCBPQ99417 103 aaPredicted RBP-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 CIB1Q99828 191 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 OR8D2Q9GZM6 311 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 CDC42SE1Q9NRR8 79 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 STMN3Q9NZ72 180 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 EMC3Q9P0I2 261 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 SNX10Q9Y5X0 201 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 POLQO75417 2590 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 TTC21AQ8NDW8 1320 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 TENM2Q9NT68 2774 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 PIEZO1Q92508 2521 aa-0.49□□□□□ -2.49
CLOCK-207ENST00000508049 MAP2P11137 1827 aaKnown RBP-0.5□□□□□ -2.49
CLOCK-207ENST00000508049 OBSL1O75147 1896 aa-0.5□□□□□ -2.49
CLOCK-207ENST00000508049 COL6A3P12111 3177 aa-0.5□□□□□ -2.49
CLOCK-207ENST00000508049 TRAV1-1A0A0B4J248 108 aa-0.5□□□□□ -2.49
CLOCK-207ENST00000508049 A0A1B0GTQ1 180 aa-0.5□□□□□ -2.49
CLOCK-207ENST00000508049 SERTM2A0A1B0GWG4 89 aa-0.5□□□□□ -2.49
CLOCK-207ENST00000508049 EFCAB9A8MZ26 197 aa-0.5□□□□□ -2.49
CLOCK-207ENST00000508049 ZNF736B4DX44 427 aaPredicted RBP-0.5□□□□□ -2.49
CLOCK-207ENST00000508049 C10orf142B7Z368 130 aa-0.5□□□□□ -2.49
CLOCK-207ENST00000508049 C21orf140B9A014 251 aa-0.5□□□□□ -2.49
CLOCK-207ENST00000508049 hCG_2039718K7EN88 272 aa-0.5□□□□□ -2.49
CLOCK-207ENST00000508049 LEPROTO15243 131 aa-0.5□□□□□ -2.49
CLOCK-207ENST00000508049 KDELR3O43731 214 aa-0.5□□□□□ -2.49
CLOCK-207ENST00000508049 ENSAO43768 121 aaKnown RBP-0.5□□□□□ -2.49
CLOCK-207ENST00000508049 SNX4O95219 450 aa-0.5□□□□□ -2.49
CLOCK-207ENST00000508049 OR5F1O95221 314 aa-0.5□□□□□ -2.49
CLOCK-207ENST00000508049 NSA2O95478 260 aaKnown RBP-0.5□□□□□ -2.49
CLOCK-207ENST00000508049 CRYGCP07315 174 aa-0.5□□□□□ -2.49
CLOCK-207ENST00000508049 ASAH2BP0C7U1 165 aa-0.5□□□□□ -2.49
CLOCK-207ENST00000508049 NFYAP23511 347 aaPredicted RBP-0.5□□□□□ -2.49
CLOCK-207ENST00000508049 RCVRNP35243 200 aa-0.5□□□□□ -2.49
CLOCK-207ENST00000508049 SLCO1A2P46721 670 aa-0.5□□□□□ -2.49
CLOCK-207ENST00000508049 CD151P48509 253 aa-0.5□□□□□ -2.49
CLOCK-207ENST00000508049 OR10A3P58181 314 aa-0.5□□□□□ -2.49
CLOCK-207ENST00000508049 DAD1P61803 113 aa-0.5□□□□□ -2.49
CLOCK-207ENST00000508049 SUPT4H1P63272 117 aaKnown RBP-0.5□□□□□ -2.49
CLOCK-207ENST00000508049 BEX3Q00994 111 aa-0.5□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms