RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 DHFRP00374 187 aa5.06□□□□□ -1.6
VCAN-207ENST00000507162 CST1P01037 141 aa5.06□□□□□ -1.6
VCAN-207ENST00000507162 GLAP06280 429 aa5.06□□□□□ -1.6
VCAN-207ENST00000507162 SPP1P10451 314 aa5.06□□□□□ -1.6
VCAN-207ENST00000507162 AREGP15514 252 aa5.06□□□□□ -1.6
VCAN-207ENST00000507162 HIST1H1BP16401 226 aaKnown RBP5.06□□□□□ -1.6
VCAN-207ENST00000507162 ASIPP42127 132 aa5.06□□□□□ -1.6
VCAN-207ENST00000507162 RPL11P62913 178 aaKnown RBP5.06□□□□□ -1.6
VCAN-207ENST00000507162 GPR176Q14439 515 aa5.06□□□□□ -1.6
VCAN-207ENST00000507162 ATP6AP1Q15904 470 aa5.06□□□□□ -1.6
VCAN-207ENST00000507162 RTL8BQ17RB0 113 aa5.06□□□□□ -1.6
VCAN-207ENST00000507162 DDI2Q5TDH0 399 aa5.06□□□□□ -1.6
VCAN-207ENST00000507162 FDX2Q6P4F2 183 aa5.06□□□□□ -1.6
VCAN-207ENST00000507162 GSG1LQ6UXU4 331 aa5.06□□□□□ -1.6
VCAN-207ENST00000507162 GID4Q8IVV7 300 aa5.06□□□□□ -1.6
VCAN-207ENST00000507162 TMEM116Q8NCL8 245 aa5.06□□□□□ -1.6
VCAN-207ENST00000507162 CSNK1G2-AS1Q8NCQ2 148 aa5.06□□□□□ -1.6
VCAN-207ENST00000507162 THTPAQ9BU02 230 aa5.06□□□□□ -1.6
VCAN-207ENST00000507162 SELENOIQ9C0D9 397 aa5.06□□□□□ -1.6
VCAN-207ENST00000507162 SLC2A9Q9NRM0 540 aa5.06□□□□□ -1.6
VCAN-207ENST00000507162 LINC00588Q9Y4M8 146 aa5.06□□□□□ -1.6
VCAN-207ENST00000507162 PKHD1L1Q86WI1 4243 aa5.05□□□□□ -1.6
VCAN-207ENST00000507162 DAPL1A0PJW8 107 aa5.05□□□□□ -1.6
VCAN-207ENST00000507162 TEX22C9J3V5 150 aa5.05□□□□□ -1.6
VCAN-207ENST00000507162 K7EMT4 169 aa5.05□□□□□ -1.6
VCAN-207ENST00000507162 RAB27BO00194 218 aa5.05□□□□□ -1.6
VCAN-207ENST00000507162 ITGB1BP1O14713 200 aa5.05□□□□□ -1.6
VCAN-207ENST00000507162 DFFBO76075 338 aa5.05□□□□□ -1.6
VCAN-207ENST00000507162 CRYZL1O95825 349 aa5.05□□□□□ -1.6
VCAN-207ENST00000507162 FAM107AO95990 144 aa5.05□□□□□ -1.6
VCAN-207ENST00000507162 IL6RP08887 468 aaPredicted RBP5.05□□□□□ -1.6
VCAN-207ENST00000507162 ANXA8P13928 327 aa5.05□□□□□ -1.6
VCAN-207ENST00000507162 ZBTB25P24278 435 aa5.05□□□□□ -1.6
VCAN-207ENST00000507162 MAS1LP35410 378 aa5.05□□□□□ -1.6
VCAN-207ENST00000507162 PSMD7P51665 324 aa5.05□□□□□ -1.6
VCAN-207ENST00000507162 FAM222AQ5U5X8 452 aa5.05□□□□□ -1.6
VCAN-207ENST00000507162 SIGIRRQ6IA17 410 aa5.05□□□□□ -1.6
VCAN-207ENST00000507162 CDPF1Q6NVV7 123 aa5.05□□□□□ -1.6
VCAN-207ENST00000507162 GLIPR1L1Q6UWM5 242 aa5.05□□□□□ -1.6
VCAN-207ENST00000507162 TRPT1Q86TN4 253 aaKnown RBP5.05□□□□□ -1.6
VCAN-207ENST00000507162 MMD2Q8IY49 270 aa5.05□□□□□ -1.6
VCAN-207ENST00000507162 FAM24BQ8N5W8 94 aa5.05□□□□□ -1.6
VCAN-207ENST00000507162 OR5AK2Q8NH90 309 aa5.05□□□□□ -1.6
VCAN-207ENST00000507162 ZNF502Q8TBZ5 544 aa5.05□□□□□ -1.6
VCAN-207ENST00000507162 OR14A2Q96R54 314 aa5.05□□□□□ -1.6
VCAN-207ENST00000507162 PDCD1LG2Q9BQ51 273 aa5.05□□□□□ -1.6
VCAN-207ENST00000507162 DCUN1D5Q9BTE7 237 aa5.05□□□□□ -1.6
VCAN-207ENST00000507162 FAAP24Q9BTP7 215 aa5.05□□□□□ -1.6
VCAN-207ENST00000507162 KRTAP1-5Q9BYS1 174 aa5.05□□□□□ -1.6
VCAN-207ENST00000507162 PRRG3Q9BZD7 231 aa5.05□□□□□ -1.6
VCAN-207ENST00000507162 TMEM138Q9NPI0 162 aa5.05□□□□□ -1.6
VCAN-207ENST00000507162 FGFR1OP2Q9NVK5 253 aa5.05□□□□□ -1.6
VCAN-207ENST00000507162 RABAC1Q9UI14 185 aa5.05□□□□□ -1.6
VCAN-207ENST00000507162 GMPPBQ9Y5P6 360 aa5.05□□□□□ -1.6
VCAN-207ENST00000507162 IGHV3OR16-12A0A075B7B8 117 aa5.04□□□□□ -1.6
VCAN-207ENST00000507162 A0A1W2PPQ1 181 aa5.04□□□□□ -1.6
VCAN-207ENST00000507162 E7EUB6 86 aa5.04□□□□□ -1.6
VCAN-207ENST00000507162 NDUFA4O00483 81 aa5.04□□□□□ -1.6
VCAN-207ENST00000507162 CREBL2O60519 120 aaPredicted RBP5.04□□□□□ -1.6
VCAN-207ENST00000507162 PDCD6O75340 191 aa5.04□□□□□ -1.6
VCAN-207ENST00000507162 CRTAPO75718 401 aaPredicted RBP5.04□□□□□ -1.6
VCAN-207ENST00000507162 YIF1AO95070 293 aa5.04□□□□□ -1.6
VCAN-207ENST00000507162 OXTP01178 125 aa5.04□□□□□ -1.6
VCAN-207ENST00000507162 SAA1P0DJI8 122 aaPredicted RBP5.04□□□□□ -1.6
VCAN-207ENST00000507162 GCSHP23434 173 aa5.04□□□□□ -1.6
VCAN-207ENST00000507162 RPL27AP46776 148 aaKnown RBP5.04□□□□□ -1.6
VCAN-207ENST00000507162 PPP3R1P63098 170 aa5.04□□□□□ -1.6
VCAN-207ENST00000507162 CLINT1Q14677 625 aa5.04□□□□□ -1.6
VCAN-207ENST00000507162 USF2Q15853 346 aaPredicted RBP5.04□□□□□ -1.6
VCAN-207ENST00000507162 TTC32Q5I0X7 151 aa5.04□□□□□ -1.6
VCAN-207ENST00000507162 ACTL10Q5JWF8 245 aa5.04□□□□□ -1.6
VCAN-207ENST00000507162 TCF24Q7RTU0 167 aa5.04□□□□□ -1.6
VCAN-207ENST00000507162 OR6M1Q8NGM8 313 aa5.04□□□□□ -1.6
VCAN-207ENST00000507162 RNF141Q8WVD5 230 aa5.04□□□□□ -1.6
VCAN-207ENST00000507162 MUL1Q969V5 352 aa5.04□□□□□ -1.6
VCAN-207ENST00000507162 NEDD4LQ96PU5 975 aa5.04□□□□□ -1.6
VCAN-207ENST00000507162 MS4A6AQ9H2W1 248 aa5.04□□□□□ -1.6
VCAN-207ENST00000507162 MAGIXQ9H6Y5 334 aa5.04□□□□□ -1.6
VCAN-207ENST00000507162 XCL2Q9UBD3 114 aa5.04□□□□□ -1.6
VCAN-207ENST00000507162 DKK2Q9UBU2 259 aa5.04□□□□□ -1.6
VCAN-207ENST00000507162 FAT3Q8TDW7 4589 aa5.03□□□□□ -1.6
VCAN-207ENST00000507162 IGLV11-55A0A075B6I3 123 aa5.03□□□□□ -1.6
VCAN-207ENST00000507162 IGHV3-21A0A0B4J1V1 117 aa5.03□□□□□ -1.6
VCAN-207ENST00000507162 IGHV7-4-1A0A0J9YVY3 117 aa5.03□□□□□ -1.6
VCAN-207ENST00000507162 TMEM189A5PLL7 270 aa5.03□□□□□ -1.6
VCAN-207ENST00000507162 SLC16A6O15403 523 aa5.03□□□□□ -1.6
VCAN-207ENST00000507162 CRYGCP07315 174 aa5.03□□□□□ -1.6
VCAN-207ENST00000507162 RRASP10301 218 aa5.03□□□□□ -1.6
VCAN-207ENST00000507162 MGMTP16455 207 aa5.03□□□□□ -1.6
VCAN-207ENST00000507162 GNB3P16520 340 aa5.03□□□□□ -1.6
VCAN-207ENST00000507162 PTBP1P26599 531 aaKnown RBP eCLIP5.03□□□□□ -1.6
VCAN-207ENST00000507162 BDKRB2P30411 391 aa5.03□□□□□ -1.6
VCAN-207ENST00000507162 MNAT1P51948 309 aa5.03□□□□□ -1.6
VCAN-207ENST00000507162 OR2B8PP59922 312 aa5.03□□□□□ -1.6
VCAN-207ENST00000507162 DAD1P61803 113 aa5.03□□□□□ -1.6
VCAN-207ENST00000507162 EFNB1P98172 346 aa5.03□□□□□ -1.6
VCAN-207ENST00000507162 TPBGQ13641 420 aa5.03□□□□□ -1.6
VCAN-207ENST00000507162 CDK10Q15131 360 aa5.03□□□□□ -1.6
VCAN-207ENST00000507162 UBE2UQ5VVX9 321 aa5.03□□□□□ -1.6
VCAN-207ENST00000507162 FAM90A2PQ658T7 463 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms