RNA–Protein interactions for RNA: ENST00000506885.5

CLDND1-212, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-212ENST00000506885 Q8N976 141 aa3.39□□□□□ -1.87
CLDND1-212ENST00000506885 FRZBQ92765 325 aa3.39□□□□□ -1.87
CLDND1-212ENST00000506885 GPR146Q96CH1 333 aa3.39□□□□□ -1.87
CLDND1-212ENST00000506885 GNPNAT1Q96EK6 184 aaPredicted RBP3.39□□□□□ -1.87
CLDND1-212ENST00000506885 PDXPQ96GD0 296 aa3.39□□□□□ -1.87
CLDND1-212ENST00000506885 PYURFQ96I23 114 aa3.39□□□□□ -1.87
CLDND1-212ENST00000506885 RSPO3Q9BXY4 272 aaPredicted RBP3.39□□□□□ -1.87
CLDND1-212ENST00000506885 COMMD5Q9GZQ3 224 aa3.39□□□□□ -1.87
CLDND1-212ENST00000506885 KCNIP2Q9NS61 270 aa3.39□□□□□ -1.87
CLDND1-212ENST00000506885 TMEM38BQ9NVV0 291 aa3.39□□□□□ -1.87
CLDND1-212ENST00000506885 TBX21Q9UL17 535 aa3.39□□□□□ -1.87
CLDND1-212ENST00000506885 PXDNQ92626 1479 aa3.39□□□□□ -1.87
CLDND1-212ENST00000506885 MYOM1P52179 1685 aa3.39□□□□□ -1.87
CLDND1-212ENST00000506885 RREB1Q92766 1687 aa3.39□□□□□ -1.87
CLDND1-212ENST00000506885 NEXMIFQ5QGS0 1516 aa3.39□□□□□ -1.87
CLDND1-212ENST00000506885 LMTK2Q8IWU2 1503 aa3.39□□□□□ -1.87
CLDND1-212ENST00000506885 NUP188Q5SRE5 1749 aa3.39□□□□□ -1.87
CLDND1-212ENST00000506885 XRN1Q8IZH2 1706 aaKnown RBP3.39□□□□□ -1.87
CLDND1-212ENST00000506885 NWD2Q9ULI1 1742 aa3.39□□□□□ -1.87
CLDND1-212ENST00000506885 MYH3P11055 1940 aa3.38□□□□□ -1.87
CLDND1-212ENST00000506885 KIF26BQ2KJY2 2108 aa3.38□□□□□ -1.87
CLDND1-212ENST00000506885 MYO5BQ9ULV0 1848 aa3.38□□□□□ -1.87
CLDND1-212ENST00000506885 IGHV3-64DA0A0J9YX35 117 aa3.38□□□□□ -1.87
CLDND1-212ENST00000506885 A6NDX4 124 aa3.38□□□□□ -1.87
CLDND1-212ENST00000506885 SLC17A3O00476 420 aa3.38□□□□□ -1.87
CLDND1-212ENST00000506885 NDUFA2O43678 99 aa3.38□□□□□ -1.87
CLDND1-212ENST00000506885 NDUFC2O95298 119 aa3.38□□□□□ -1.87
CLDND1-212ENST00000506885 C8GP07360 202 aa3.38□□□□□ -1.87
CLDND1-212ENST00000506885 LGALS1P09382 135 aaKnown RBP3.38□□□□□ -1.87
CLDND1-212ENST00000506885 OR56A5P0C7T3 313 aa3.38□□□□□ -1.87
CLDND1-212ENST00000506885 DAPP51397 102 aa3.38□□□□□ -1.87
CLDND1-212ENST00000506885 CDC42P60953 191 aa3.38□□□□□ -1.87
CLDND1-212ENST00000506885 ESRRGP62508 458 aa3.38□□□□□ -1.87
CLDND1-212ENST00000506885 DEFA6Q01524 100 aa3.38□□□□□ -1.87
CLDND1-212ENST00000506885 GNA12Q03113 381 aa3.38□□□□□ -1.87
CLDND1-212ENST00000506885 LOXL1Q08397 574 aaPredicted RBP3.38□□□□□ -1.87
CLDND1-212ENST00000506885 PDGFRLQ15198 375 aa3.38□□□□□ -1.87
CLDND1-212ENST00000506885 MMDQ15546 238 aa3.38□□□□□ -1.87
CLDND1-212ENST00000506885 RNF212Q495C1 297 aa3.38□□□□□ -1.87
CLDND1-212ENST00000506885 LINC01551Q86U37 167 aa3.38□□□□□ -1.87
CLDND1-212ENST00000506885 MKXQ8IYA7 352 aa3.38□□□□□ -1.87
CLDND1-212ENST00000506885 Q8N9W7 124 aa3.38□□□□□ -1.87
CLDND1-212ENST00000506885 OR10G2Q8NGC3 310 aa3.38□□□□□ -1.87
CLDND1-212ENST00000506885 TRIB3Q96RU7 358 aa3.38□□□□□ -1.87
CLDND1-212ENST00000506885 NMNAT3Q96T66 252 aa3.38□□□□□ -1.87
CLDND1-212ENST00000506885 CCL13Q99616 98 aa3.38□□□□□ -1.87
CLDND1-212ENST00000506885 TMEM70Q9BUB7 260 aa3.38□□□□□ -1.87
CLDND1-212ENST00000506885 EFCAB11Q9BUY7 163 aa3.38□□□□□ -1.87
CLDND1-212ENST00000506885 KRTAP4-3Q9BYR4 195 aa3.38□□□□□ -1.87
CLDND1-212ENST00000506885 ALX4Q9H161 411 aaPredicted RBP3.38□□□□□ -1.87
CLDND1-212ENST00000506885 SLC23A2Q9UGH3 650 aa3.38□□□□□ -1.87
CLDND1-212ENST00000506885 PLCH1Q4KWH8 1693 aa3.38□□□□□ -1.87
CLDND1-212ENST00000506885 GCC2Q8IWJ2 1684 aa3.38□□□□□ -1.87
CLDND1-212ENST00000506885 THSD7AQ9UPZ6 1657 aa3.38□□□□□ -1.87
CLDND1-212ENST00000506885 NALCNQ8IZF0 1738 aa3.38□□□□□ -1.87
CLDND1-212ENST00000506885 SHANK3Q9BYB0 1731 aa3.38□□□□□ -1.87
CLDND1-212ENST00000506885 ROBO3Q96MS0 1386 aa3.38□□□□□ -1.87
CLDND1-212ENST00000506885 VIRMAQ69YN4 1812 aaKnown RBP3.37□□□□□ -1.87
CLDND1-212ENST00000506885 TNS3Q68CZ2 1445 aa3.37□□□□□ -1.87
CLDND1-212ENST00000506885 A0A1W2PP18 115 aa3.37□□□□□ -1.87
CLDND1-212ENST00000506885 NKX2-6A6NCS4 301 aa3.37□□□□□ -1.87
CLDND1-212ENST00000506885 SIGLEC16A6NMB1 481 aa3.37□□□□□ -1.87
CLDND1-212ENST00000506885 E7EQ34 232 aa3.37□□□□□ -1.87
CLDND1-212ENST00000506885 AIPO00170 330 aa3.37□□□□□ -1.87
CLDND1-212ENST00000506885 PIRO00625 290 aa3.37□□□□□ -1.87
CLDND1-212ENST00000506885 GSTZ1O43708 216 aaPredicted RBP3.37□□□□□ -1.87
CLDND1-212ENST00000506885 ZNF682O95780 498 aa3.37□□□□□ -1.87
CLDND1-212ENST00000506885 ZNF806P0C7X5 589 aa3.37□□□□□ -1.87
CLDND1-212ENST00000506885 LHX2P50458 406 aa3.37□□□□□ -1.87
CLDND1-212ENST00000506885 AP1S1P61966 158 aa3.37□□□□□ -1.87
CLDND1-212ENST00000506885 IGLV3-21P80748 117 aaPredicted RBP3.37□□□□□ -1.87
CLDND1-212ENST00000506885 KLHL12Q53G59 568 aa3.37□□□□□ -1.87
CLDND1-212ENST00000506885 UNQ9165/PRO28630Q6UXU0 137 aa3.37□□□□□ -1.87
CLDND1-212ENST00000506885 NTM-AS1Q6ZSK4 140 aa3.37□□□□□ -1.87
CLDND1-212ENST00000506885 ZNF664Q8N3J9 261 aa3.37□□□□□ -1.87
CLDND1-212ENST00000506885 KRTCAP2Q8N6L1 136 aa3.37□□□□□ -1.87
CLDND1-212ENST00000506885 OR5J2Q8NH18 312 aa3.37□□□□□ -1.87
CLDND1-212ENST00000506885 OR4A5Q8NH83 315 aa3.37□□□□□ -1.87
CLDND1-212ENST00000506885 CCDC90BQ9GZT6 254 aa3.37□□□□□ -1.87
CLDND1-212ENST00000506885 GPR84Q9NQS5 396 aa3.37□□□□□ -1.87
CLDND1-212ENST00000506885 TAAR3PQ9P1P4 343 aa3.37□□□□□ -1.87
CLDND1-212ENST00000506885 CSAG2Q9Y5P2 127 aa3.37□□□□□ -1.87
CLDND1-212ENST00000506885 HFM1A2PYH4 1435 aa3.36□□□□□ -1.87
CLDND1-212ENST00000506885 MYOM3Q5VTT5 1437 aa3.36□□□□□ -1.87
CLDND1-212ENST00000506885 A0A1W2PQ67 120 aa3.36□□□□□ -1.87
CLDND1-212ENST00000506885 COX7A2LO14548 114 aa3.36□□□□□ -1.87
CLDND1-212ENST00000506885 HLA-DQA1P01909 254 aa3.36□□□□□ -1.87
CLDND1-212ENST00000506885 ELF3P78545 371 aaPredicted RBP3.36□□□□□ -1.87
CLDND1-212ENST00000506885 HOXC5Q00444 222 aa3.36□□□□□ -1.87
CLDND1-212ENST00000506885 CST6Q15828 149 aa3.36□□□□□ -1.87
CLDND1-212ENST00000506885 GRK1Q15835 563 aa3.36□□□□□ -1.87
CLDND1-212ENST00000506885 ZNF678Q5SXM1 525 aa3.36□□□□□ -1.87
CLDND1-212ENST00000506885 TIFABQ6ZNK6 161 aa3.36□□□□□ -1.87
CLDND1-212ENST00000506885 KRTAP5-2Q701N4 177 aa3.36□□□□□ -1.87
CLDND1-212ENST00000506885 SLC22A24Q8N4F4 322 aa3.36□□□□□ -1.87
CLDND1-212ENST00000506885 Q8N7P7 452 aa3.36□□□□□ -1.87
CLDND1-212ENST00000506885 OR5W2Q8NH69 310 aa3.36□□□□□ -1.87
CLDND1-212ENST00000506885 CIRBP-AS1Q8TBR5 109 aa3.36□□□□□ -1.87
CLDND1-212ENST00000506885 CD200R1Q8TD46 325 aa3.36□□□□□ -1.87
CLDND1-212ENST00000506885 MAL2Q969L2 176 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms