RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 TRAV3A0A0B4J244 114 aa13.82□□□□□ -0.2
SMN1-204ENST00000506163 CTDSPLO15194 276 aa13.82□□□□□ -0.2
SMN1-204ENST00000506163 RBMXL2O75526 392 aaKnown RBP13.82□□□□□ -0.2
SMN1-204ENST00000506163 S1PR2O95136 353 aa13.82□□□□□ -0.2
SMN1-204ENST00000506163 UCP3P55916 312 aa13.82□□□□□ -0.2
SMN1-204ENST00000506163 CATR1Q13166 79 aa13.82□□□□□ -0.2
SMN1-204ENST00000506163 RNASE10Q5GAN6 216 aaKnown RBP13.82□□□□□ -0.2
SMN1-204ENST00000506163 OR4A47Q6IF82 309 aa13.82□□□□□ -0.2
SMN1-204ENST00000506163 MRGPRFQ96AM1 343 aa13.82□□□□□ -0.2
SMN1-204ENST00000506163 ZNF701M0R085 212 aaPredicted RBP13.81□□□□□ -0.2
SMN1-204ENST00000506163 HPRT1P00492 218 aa13.81□□□□□ -0.2
SMN1-204ENST00000506163 HRASP01112 189 aa13.81□□□□□ -0.2
SMN1-204ENST00000506163 MRPS10P82664 201 aaKnown RBP13.81□□□□□ -0.2
SMN1-204ENST00000506163 RUNX1Q01196 453 aa13.81□□□□□ -0.2
SMN1-204ENST00000506163 FHL3Q13643 280 aa13.81□□□□□ -0.2
SMN1-204ENST00000506163 POU2AF1Q16633 256 aa13.81□□□□□ -0.2
SMN1-204ENST00000506163 FAAP20Q6NZ36 180 aa13.81□□□□□ -0.2
SMN1-204ENST00000506163 MMD2Q8IY49 270 aa13.81□□□□□ -0.2
SMN1-204ENST00000506163 DGCR14Q96DF8 476 aaKnown RBP13.81□□□□□ -0.2
SMN1-204ENST00000506163 PRKDCP78527 4128 aaKnown RBP13.81□□□□□ -0.2
SMN1-204ENST00000506163 HMX3A6NHT5 357 aa13.81□□□□□ -0.2
SMN1-204ENST00000506163 CGB1A6NKQ9 187 aa13.81□□□□□ -0.2
SMN1-204ENST00000506163 TEX22C9J3V5 150 aa13.81□□□□□ -0.2
SMN1-204ENST00000506163 WIPF1O43516 503 aa13.81□□□□□ -0.2
SMN1-204ENST00000506163 IGHV3-11P01762 117 aa13.81□□□□□ -0.2
SMN1-204ENST00000506163 PRB2P02812 416 aaPredicted RBP13.81□□□□□ -0.2
SMN1-204ENST00000506163 RPA2P15927 270 aa13.81□□□□□ -0.2
SMN1-204ENST00000506163 PI3P19957 117 aa13.81□□□□□ -0.2
SMN1-204ENST00000506163 F2RP25116 425 aa13.81□□□□□ -0.2
SMN1-204ENST00000506163 TAS2R31P59538 309 aa13.81□□□□□ -0.2
SMN1-204ENST00000506163 TAS2R19P59542 299 aa13.81□□□□□ -0.2
SMN1-204ENST00000506163 DEFA5Q01523 94 aa13.81□□□□□ -0.2
SMN1-204ENST00000506163 FOXB2Q5VYV0 432 aa13.81□□□□□ -0.2
SMN1-204ENST00000506163 CMTM1Q8IZ96 169 aa13.81□□□□□ -0.2
SMN1-204ENST00000506163 POC5Q8NA72 575 aa13.81□□□□□ -0.2
SMN1-204ENST00000506163 ADAD2Q8NCV1 583 aaKnown RBP13.81□□□□□ -0.2
SMN1-204ENST00000506163 OR11H1Q8NG94 326 aa13.81□□□□□ -0.2
SMN1-204ENST00000506163 BORCS5Q969J3 196 aa13.81□□□□□ -0.2
SMN1-204ENST00000506163 PLEKHA2Q9HB19 425 aa13.81□□□□□ -0.2
SMN1-204ENST00000506163 BET1LQ9NYM9 111 aa13.81□□□□□ -0.2
SMN1-204ENST00000506163 FABP12A6NFH5 140 aa13.8□□□□□ -0.2
SMN1-204ENST00000506163 GSTZ1O43708 216 aaPredicted RBP13.8□□□□□ -0.2
SMN1-204ENST00000506163 RAB3DO95716 219 aa13.8□□□□□ -0.2
SMN1-204ENST00000506163 TRGV3P03979 118 aa13.8□□□□□ -0.2
SMN1-204ENST00000506163 IFNA6P05013 189 aa13.8□□□□□ -0.2
SMN1-204ENST00000506163 NQO2P16083 231 aa13.8□□□□□ -0.2
SMN1-204ENST00000506163 TBPP20226 339 aa13.8□□□□□ -0.2
SMN1-204ENST00000506163 LPAR6P43657 344 aa13.8□□□□□ -0.2
SMN1-204ENST00000506163 TPPP2P59282 170 aa13.8□□□□□ -0.2
SMN1-204ENST00000506163 SSBP1Q04837 148 aaKnown RBP13.8□□□□□ -0.2
SMN1-204ENST00000506163 STEAP1BQ6NZ63 245 aa13.8□□□□□ -0.2
SMN1-204ENST00000506163 LPCAT3Q6P1A2 487 aa13.8□□□□□ -0.2
SMN1-204ENST00000506163 TBC1D26Q86UD7 250 aa13.8□□□□□ -0.2
SMN1-204ENST00000506163 SLC38A6Q8IZM9 456 aa13.8□□□□□ -0.2
SMN1-204ENST00000506163 ARRDC1Q8N5I2 433 aa13.8□□□□□ -0.2
SMN1-204ENST00000506163 VSTM2AQ8TAG5 236 aa13.8□□□□□ -0.2
SMN1-204ENST00000506163 CD300LFQ8TDQ1 290 aa13.8□□□□□ -0.2
SMN1-204ENST00000506163 TMEM68Q96MH6 324 aa13.8□□□□□ -0.2
SMN1-204ENST00000506163 C19orf35Q6ZS72 473 aa13.79□□□□□ -0.2
SMN1-204ENST00000506163 OR1N2Q8NGR9 330 aa13.79□□□□□ -0.2
SMN1-204ENST00000506163 TERB2Q8NHR7 220 aa13.79□□□□□ -0.2
SMN1-204ENST00000506163 PHB2Q99623 299 aa13.79□□□□□ -0.2
SMN1-204ENST00000506163 ZNF355PQ9NSJ1 428 aa13.79□□□□□ -0.2
SMN1-204ENST00000506163 TMEM140Q9NV12 185 aa13.79□□□□□ -0.2
SMN1-204ENST00000506163 RABL2AQ9UBK7 228 aaPredicted RBP13.79□□□□□ -0.2
SMN1-204ENST00000506163 RABL2BQ9UNT1 228 aa13.79□□□□□ -0.2
SMN1-204ENST00000506163 V9GYH0 126 aa13.79□□□□□ -0.2
SMN1-204ENST00000506163 DPPA5A6NC42 116 aa13.78□□□□□ -0.2
SMN1-204ENST00000506163 H3BUA1 57 aa13.78□□□□□ -0.2
SMN1-204ENST00000506163 UPK2O00526 184 aa13.78□□□□□ -0.2
SMN1-204ENST00000506163 BRI3O95415 125 aa13.78□□□□□ -0.2
SMN1-204ENST00000506163 IGKV1-39P01597 117 aa13.78□□□□□ -0.2
SMN1-204ENST00000506163 PRH1P02810 166 aa13.78□□□□□ -0.2
SMN1-204ENST00000506163 IGKV1D-39P04432 117 aa13.78□□□□□ -0.2
SMN1-204ENST00000506163 PPP5CP53041 499 aa13.78□□□□□ -0.2
SMN1-204ENST00000506163 RPL8P62917 257 aaKnown RBP13.78□□□□□ -0.2
SMN1-204ENST00000506163 ZNF45Q02386 682 aa13.78□□□□□ -0.2
SMN1-204ENST00000506163 CCDC190Q86UF4 302 aa13.78□□□□□ -0.2
SMN1-204ENST00000506163 OR4C16Q8NGL9 310 aa13.78□□□□□ -0.2
SMN1-204ENST00000506163 RCC1LQ96I51 464 aaKnown RBP13.78□□□□□ -0.2
SMN1-204ENST00000506163 SLA2Q9H6Q3 261 aa13.78□□□□□ -0.2
SMN1-204ENST00000506163 HRASLSQ9HDD0 168 aa13.78□□□□□ -0.2
SMN1-204ENST00000506163 SLC2A9Q9NRM0 540 aa13.78□□□□□ -0.2
SMN1-204ENST00000506163 COMMD9Q9P000 198 aa13.78□□□□□ -0.2
SMN1-204ENST00000506163 CREBL2O60519 120 aaPredicted RBP13.77□□□□□ -0.21
SMN1-204ENST00000506163 ACTL6BO94805 426 aa13.77□□□□□ -0.21
SMN1-204ENST00000506163 LGALS1P09382 135 aaKnown RBP13.77□□□□□ -0.21
SMN1-204ENST00000506163 OR9G9P0C7N8 305 aa13.77□□□□□ -0.21
SMN1-204ENST00000506163 HLA-GP17693 338 aa13.77□□□□□ -0.21
SMN1-204ENST00000506163 MAS1LP35410 378 aa13.77□□□□□ -0.21
SMN1-204ENST00000506163 RPL27AP46776 148 aaKnown RBP13.77□□□□□ -0.21
SMN1-204ENST00000506163 RAB25P57735 213 aa13.77□□□□□ -0.21
SMN1-204ENST00000506163 ZNF79Q15937 498 aa13.77□□□□□ -0.21
SMN1-204ENST00000506163 SCGB2B2Q4G0G5 96 aa13.77□□□□□ -0.21
SMN1-204ENST00000506163 TTC9CQ8N5M4 171 aa13.77□□□□□ -0.21
SMN1-204ENST00000506163 OR4A5Q8NH83 315 aa13.77□□□□□ -0.21
SMN1-204ENST00000506163 SPIN2AQ99865 258 aa13.77□□□□□ -0.21
SMN1-204ENST00000506163 SPIN2BQ9BPZ2 258 aa13.77□□□□□ -0.21
SMN1-204ENST00000506163 COA4Q9NYJ1 87 aa13.77□□□□□ -0.21
SMN1-204ENST00000506163 IGHV4OR15-8A0A075B7B6 117 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms