RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, human

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNB1-208	ENST00000504788	C7orf66	A4D0T2	115 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	TEX22	C9J3V5	150 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	SLC25A17	O43808	307 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	PITX3	O75364	302 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	PEX14	O75381	377 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	RBMXL2	O75526	392 aa	Known RBP	3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	OR4E1	P0C645	316 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	OR9G9	P0C7N8	305 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	MYOD1	P15172	320 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	LPAR6	P43657	344 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	RAG2	P55895	527 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	UBE2M	P61081	183 aa	Known RBP	3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	CX3CL1	P78423	397 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	CATR1	Q13166	79 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	IL15RA	Q13261	267 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	MMD	Q15546	238 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	IZUMO4	Q1ZYL8	232 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	ABCA11P	Q4W5N1	156 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	PDLIM3	Q53GG5	364 aa	Predicted RBP	3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	TCTEX1D4	Q5JR98	221 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	C10orf99	Q6UWK7	81 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	SELENOH	Q8IZQ5	122 aa	Known RBP	3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	CENPS	Q8N2Z9	138 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	TEX45	Q8NA69	505 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	OR52B4	Q8NGK2	314 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	OR4S2	Q8NH73	311 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	TMEM167A	Q8TBQ9	72 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	MITD1	Q8WV92	249 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	HARBI1	Q96MB7	349 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	FBXL15	Q9H469	300 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	ZNF430	Q9H8G1	570 aa	Predicted RBP	3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	TNFRSF19	Q9NS68	423 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	COMMD9	Q9P000	198 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	NUBP2	Q9Y5Y2	271 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	MPTX1	A8MV57	137 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788		H7C2Y5	167 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788		M0QZK8	103 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	B3GALNT1	O75752	331 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	KBTBD11	O94819	623 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	SFT2D2	O95562	160 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	DUS4L	O95620	317 aa	Known RBP	3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	PTTG1	O95997	202 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	APOA2	P02652	100 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	RPA2	P15927	270 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	NQO2	P16083	231 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	MDK	P21741	143 aa	Predicted RBP	3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	G6PC	P35575	357 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	KIR2DS2	P43631	304 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	ARHGDIB	P52566	201 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	DCTN2	Q13561	401 aa	Known RBP	3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	KIAA0141	Q14154	515 aa	Predicted RBP	3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	HES1	Q14469	280 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	PRSS8	Q16651	343 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	RTL8B	Q17RB0	113 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	C2orf68	Q2NKX9	166 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	C10orf55	Q5SWW7	151 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	ZNF562	Q6V9R5	426 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	RBMS3	Q6XE24	437 aa	Known RBP	3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	LYZL2	Q7Z4W2	148 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	SLC35G3	Q8N808	338 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	RNF152	Q8N8N0	203 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	MINDY2	Q8NBR6	621 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	MYOZ3	Q8TDC0	251 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	CD300LF	Q8TDQ1	290 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	IL22RA2	Q969J5	263 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	R3HDM4	Q96D70	268 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	JMJD8	Q96S16	334 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	TMEM14B	Q9NUH8	114 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	TMEM140	Q9NV12	185 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	COPZ2	Q9P299	210 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	METTL1	Q9UBP6	276 aa	Known RBP	3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	PRELID3B	Q9Y3B1	194 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	DMRT1	Q9Y5R6	373 aa		3.88	□□□□□ -1.79
LMNB1-208	ENST00000504788	TRAV6	A0A075B6T7	132 aa		3.87	□□□□□ -1.79
LMNB1-208	ENST00000504788		A0A0B4J2A0	478 aa		3.87	□□□□□ -1.79
LMNB1-208	ENST00000504788	FAM240B	A0A1B0GVZ2	78 aa		3.87	□□□□□ -1.79
LMNB1-208	ENST00000504788	IGLC7	A0M8Q6	106 aa		3.87	□□□□□ -1.79
LMNB1-208	ENST00000504788		A6NJY4	79 aa		3.87	□□□□□ -1.79
LMNB1-208	ENST00000504788	CENPX	A8MT69	81 aa		3.87	□□□□□ -1.79
LMNB1-208	ENST00000504788	RNF212B	A8MTL3	300 aa		3.87	□□□□□ -1.79
LMNB1-208	ENST00000504788	ADARB2-AS1	A8MUL3	147 aa		3.87	□□□□□ -1.79
LMNB1-208	ENST00000504788	TRIM77	I1YAP6	450 aa		3.87	□□□□□ -1.79
LMNB1-208	ENST00000504788	UPK2	O00526	184 aa		3.87	□□□□□ -1.79
LMNB1-208	ENST00000504788	SHOX	O15266	292 aa		3.87	□□□□□ -1.79
LMNB1-208	ENST00000504788	ATP6V0E1	O15342	81 aa		3.87	□□□□□ -1.79
LMNB1-208	ENST00000504788	OR2A4	O95047	310 aa		3.87	□□□□□ -1.79
LMNB1-208	ENST00000504788	CA2	P00918	260 aa		3.87	□□□□□ -1.79
LMNB1-208	ENST00000504788	KRAS	P01116	189 aa		3.87	□□□□□ -1.79
LMNB1-208	ENST00000504788	IFNA2	P01563	188 aa		3.87	□□□□□ -1.79
LMNB1-208	ENST00000504788	IGLV1-40	P01703	118 aa		3.87	□□□□□ -1.79
LMNB1-208	ENST00000504788	IL5	P05113	134 aa		3.87	□□□□□ -1.79
LMNB1-208	ENST00000504788	PGAM2	P15259	253 aa		3.87	□□□□□ -1.79
LMNB1-208	ENST00000504788	AKR1C4	P17516	323 aa		3.87	□□□□□ -1.79
LMNB1-208	ENST00000504788	HLA-G	P17693	338 aa		3.87	□□□□□ -1.79
LMNB1-208	ENST00000504788	RIPPLY3	P57055	190 aa		3.87	□□□□□ -1.79
LMNB1-208	ENST00000504788	OR2B8P	P59922	312 aa		3.87	□□□□□ -1.79
LMNB1-208	ENST00000504788	RPS16	P62249	146 aa	Known RBP	3.87	□□□□□ -1.79
LMNB1-208	ENST00000504788	BSX	Q3C1V8	233 aa		3.87	□□□□□ -1.79
LMNB1-208	ENST00000504788	PVRIG	Q6DKI7	326 aa		3.87	□□□□□ -1.79
LMNB1-208	ENST00000504788	LIN54	Q6MZP7	749 aa		3.87	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms