RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 ARHGAP32A7KAX9 2087 aa8.21□□□□□ -1.1
DDX41-203ENST00000504781 TRAV20A0A0B4J274 112 aa8.2□□□□□ -1.1
DDX41-203ENST00000504781 RNF222A6NCQ9 220 aa8.2□□□□□ -1.1
DDX41-203ENST00000504781 RNASEK-C17orf49H0YIS7 233 aa8.2□□□□□ -1.1
DDX41-203ENST00000504781 SMAD7O15105 426 aaKnown RBP8.2□□□□□ -1.1
DDX41-203ENST00000504781 MSMBP08118 114 aa8.2□□□□□ -1.1
DDX41-203ENST00000504781 COX7A1P24310 79 aa8.2□□□□□ -1.1
DDX41-203ENST00000504781 AP2S1P53680 142 aaPredicted RBP8.2□□□□□ -1.1
DDX41-203ENST00000504781 UBE2KP61086 200 aa8.2□□□□□ -1.1
DDX41-203ENST00000504781 RPS16P62249 146 aaKnown RBP8.2□□□□□ -1.1
DDX41-203ENST00000504781 RELBQ01201 579 aa8.2□□□□□ -1.1
DDX41-203ENST00000504781 IFITM2Q01629 132 aa8.2□□□□□ -1.1
DDX41-203ENST00000504781 TNFRSF9Q07011 255 aa8.2□□□□□ -1.1
DDX41-203ENST00000504781 HABP2Q14520 560 aaPredicted RBP8.2□□□□□ -1.1
DDX41-203ENST00000504781 Q5PR19 223 aa8.2□□□□□ -1.1
DDX41-203ENST00000504781 CLEC9AQ6UXN8 241 aa8.2□□□□□ -1.1
DDX41-203ENST00000504781 MOB3BQ86TA1 216 aa8.2□□□□□ -1.1
DDX41-203ENST00000504781 PUSL1Q8N0Z8 303 aaKnown RBP8.2□□□□□ -1.1
DDX41-203ENST00000504781 OR2C3Q8N628 320 aa8.2□□□□□ -1.1
DDX41-203ENST00000504781 TEX45Q8NA69 505 aa8.2□□□□□ -1.1
DDX41-203ENST00000504781 ARPC5LQ9BPX5 153 aa8.2□□□□□ -1.1
DDX41-203ENST00000504781 MS4A7Q9GZW8 240 aaPredicted RBP8.2□□□□□ -1.1
DDX41-203ENST00000504781 SIRT7Q9NRC8 400 aa8.2□□□□□ -1.1
DDX41-203ENST00000504781 PRNDQ9UKY0 176 aa8.2□□□□□ -1.1
DDX41-203ENST00000504781 RCL1Q9Y2P8 373 aaKnown RBP8.2□□□□□ -1.1
DDX41-203ENST00000504781 ZNF257Q9Y2Q1 563 aa8.2□□□□□ -1.1
DDX41-203ENST00000504781 ARID1AO14497 2285 aa8.2□□□□□ -1.1
DDX41-203ENST00000504781 SRRM4A7MD48 611 aaKnown RBP8.19□□□□□ -1.1
DDX41-203ENST00000504781 UPK2O00526 184 aa8.19□□□□□ -1.1
DDX41-203ENST00000504781 RGS13O14921 159 aa8.19□□□□□ -1.1
DDX41-203ENST00000504781 TSC22D2O75157 780 aa8.19□□□□□ -1.1
DDX41-203ENST00000504781 RBMXL2O75526 392 aaKnown RBP8.19□□□□□ -1.1
DDX41-203ENST00000504781 KBTBD11O94819 623 aa8.19□□□□□ -1.1
DDX41-203ENST00000504781 SCAF4O95104 1147 aaKnown RBP8.19□□□□□ -1.1
DDX41-203ENST00000504781 IGKV1-16P04430 117 aa8.19□□□□□ -1.1
DDX41-203ENST00000504781 REG1BP48304 166 aa8.19□□□□□ -1.1
DDX41-203ENST00000504781 PAX9P55771 341 aa8.19□□□□□ -1.1
DDX41-203ENST00000504781 ATP5IP56385 69 aaPredicted RBP8.19□□□□□ -1.1
DDX41-203ENST00000504781 BPIFB3P59826 476 aa8.19□□□□□ -1.1
DDX41-203ENST00000504781 HSPE1P61604 102 aaKnown RBP8.19□□□□□ -1.1
DDX41-203ENST00000504781 EIF5AP63241 154 aaKnown RBP8.19□□□□□ -1.1
DDX41-203ENST00000504781 RPP30P78346 268 aaKnown RBP8.19□□□□□ -1.1
DDX41-203ENST00000504781 DIAPH2-AS1Q14236 149 aa8.19□□□□□ -1.1
DDX41-203ENST00000504781 IZUMO4Q1ZYL8 232 aa8.19□□□□□ -1.1
DDX41-203ENST00000504781 OR4A47Q6IF82 309 aa8.19□□□□□ -1.1
DDX41-203ENST00000504781 TEX261Q6UWH6 196 aa8.19□□□□□ -1.1
DDX41-203ENST00000504781 THNSL2Q86YJ6 484 aa8.19□□□□□ -1.1
DDX41-203ENST00000504781 LINC01356Q8N9X3 169 aa8.19□□□□□ -1.1
DDX41-203ENST00000504781 Q96MF0 132 aa8.19□□□□□ -1.1
DDX41-203ENST00000504781 TBX15Q96SF7 602 aa8.19□□□□□ -1.1
DDX41-203ENST00000504781 TSNAXQ99598 290 aaKnown RBP8.19□□□□□ -1.1
DDX41-203ENST00000504781 REG4Q9BYZ8 158 aa8.19□□□□□ -1.1
DDX41-203ENST00000504781 ZC4H2Q9NQZ6 224 aa8.19□□□□□ -1.1
DDX41-203ENST00000504781 LYRM2Q9NU23 88 aaPredicted RBP8.19□□□□□ -1.1
DDX41-203ENST00000504781 TMEM14BQ9NUH8 114 aa8.19□□□□□ -1.1
DDX41-203ENST00000504781 TMEM140Q9NV12 185 aa8.19□□□□□ -1.1
DDX41-203ENST00000504781 PSENENQ9NZ42 101 aa8.19□□□□□ -1.1
DDX41-203ENST00000504781 FOXA2Q9Y261 457 aaPredicted RBP8.19□□□□□ -1.1
DDX41-203ENST00000504781 AUP1Q9Y679 476 aa8.19□□□□□ -1.1
DDX41-203ENST00000504781 U3KQ87 197 aa8.19□□□□□ -1.1
DDX41-203ENST00000504781 A0A096LNT2 108 aa8.18□□□□□ -1.1
DDX41-203ENST00000504781 J3QLI3 93 aa8.18□□□□□ -1.1
DDX41-203ENST00000504781 BCL2L11O43521 198 aa8.18□□□□□ -1.1
DDX41-203ENST00000504781 JTBO76095 146 aa8.18□□□□□ -1.1
DDX41-203ENST00000504781 IFNA7P01567 189 aa8.18□□□□□ -1.1
DDX41-203ENST00000504781 IFNA17P01571 189 aa8.18□□□□□ -1.1
DDX41-203ENST00000504781 OR9G9P0C7N8 305 aa8.18□□□□□ -1.1
DDX41-203ENST00000504781 MAS1LP35410 378 aa8.18□□□□□ -1.1
DDX41-203ENST00000504781 DLX1P56177 255 aa8.18□□□□□ -1.1
DDX41-203ENST00000504781 BAXQ07812 192 aa8.18□□□□□ -1.1
DDX41-203ENST00000504781 EBI3Q14213 229 aa8.18□□□□□ -1.1
DDX41-203ENST00000504781 KRTAP21-3Q3LHN1 58 aa8.18□□□□□ -1.1
DDX41-203ENST00000504781 VMA21Q3ZAQ7 101 aa8.18□□□□□ -1.1
DDX41-203ENST00000504781 ZNF767PQ75MW2 155 aa8.18□□□□□ -1.1
DDX41-203ENST00000504781 KRTAP1-3Q8IUG1 177 aa8.18□□□□□ -1.1
DDX41-203ENST00000504781 TMEM252Q8N6L7 170 aa8.18□□□□□ -1.1
DDX41-203ENST00000504781 OR5B3Q8NH48 314 aa8.18□□□□□ -1.1
DDX41-203ENST00000504781 TMEM167AQ8TBQ9 72 aa8.18□□□□□ -1.1
DDX41-203ENST00000504781 HARBI1Q96MB7 349 aa8.18□□□□□ -1.1
DDX41-203ENST00000504781 CLCC1Q96S66 551 aa8.18□□□□□ -1.1
DDX41-203ENST00000504781 MAGT1Q9H0U3 335 aa8.18□□□□□ -1.1
DDX41-203ENST00000504781 HIPK2Q9H2X6 1198 aa8.18□□□□□ -1.1
DDX41-203ENST00000504781 RBKSQ9H477 322 aa8.18□□□□□ -1.1
DDX41-203ENST00000504781 FLNAP21333 2647 aaKnown RBP8.17□□□□□ -1.1
DDX41-203ENST00000504781 CENPVL3A0A0U1RRI6 287 aa8.17□□□□□ -1.1
DDX41-203ENST00000504781 A0A1W2PPI3 338 aa8.17□□□□□ -1.1
DDX41-203ENST00000504781 MSGN1A6NI15 193 aa8.17□□□□□ -1.1
DDX41-203ENST00000504781 SSSCA1O60232 199 aa8.17□□□□□ -1.1
DDX41-203ENST00000504781 BRS3P32247 399 aa8.17□□□□□ -1.1
DDX41-203ENST00000504781 LDLRAD2Q5SZI1 272 aa8.17□□□□□ -1.1
DDX41-203ENST00000504781 SSX9Q7RTT3 188 aa8.17□□□□□ -1.1
DDX41-203ENST00000504781 VKORC1L1Q8N0U8 176 aa8.17□□□□□ -1.1
DDX41-203ENST00000504781 CIARTQ8N365 385 aaPredicted RBP8.17□□□□□ -1.1
DDX41-203ENST00000504781 ZNF680Q8NEM1 530 aa8.17□□□□□ -1.1
DDX41-203ENST00000504781 OR8H1Q8NGG4 311 aa8.17□□□□□ -1.1
DDX41-203ENST00000504781 PHYHIPLQ96FC7 376 aa8.17□□□□□ -1.1
DDX41-203ENST00000504781 QTRT1Q9BXR0 403 aaKnown RBP8.17□□□□□ -1.1
DDX41-203ENST00000504781 C7orf69Q9H7B7 122 aa8.17□□□□□ -1.1
DDX41-203ENST00000504781 NIPBLQ6KC79 2804 aaeCLIP8.17□□□□□ -1.1
DDX41-203ENST00000504781 NAV3Q8IVL0 2385 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms