RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 HSPB7Q9UBY9 170 aa8.34□□□□□ -1.07
TPM3-217ENST00000504663 IGHV1-69DA0A0B4J2H0 117 aa8.33□□□□□ -1.08
TPM3-217ENST00000504663 A0A1B0GW64 132 aa8.33□□□□□ -1.08
TPM3-217ENST00000504663 C15orf61A6NNL5 157 aa8.33□□□□□ -1.08
TPM3-217ENST00000504663 OOSP1A8MZH6 123 aa8.33□□□□□ -1.08
TPM3-217ENST00000504663 UPK2O00526 184 aa8.33□□□□□ -1.08
TPM3-217ENST00000504663 NXPH3O95157 252 aa8.33□□□□□ -1.08
TPM3-217ENST00000504663 IGHV1-69P01742 117 aa8.33□□□□□ -1.08
TPM3-217ENST00000504663 APOA2P02652 100 aa8.33□□□□□ -1.08
TPM3-217ENST00000504663 RRASP10301 218 aa8.33□□□□□ -1.08
TPM3-217ENST00000504663 MYOD1P15172 320 aa8.33□□□□□ -1.08
TPM3-217ENST00000504663 NKX2-1P43699 371 aaPredicted RBP8.33□□□□□ -1.08
TPM3-217ENST00000504663 OR2B8PP59922 312 aa8.33□□□□□ -1.08
TPM3-217ENST00000504663 POLR2GP62487 172 aaKnown RBP eCLIP8.33□□□□□ -1.08
TPM3-217ENST00000504663 EBI3Q14213 229 aa8.33□□□□□ -1.08
TPM3-217ENST00000504663 RTL8BQ17RB0 113 aa8.33□□□□□ -1.08
TPM3-217ENST00000504663 OTOGQ6ZRI0 2925 aa8.33□□□□□ -1.08
TPM3-217ENST00000504663 SSX9Q7RTT3 188 aa8.33□□□□□ -1.08
TPM3-217ENST00000504663 OSR1Q8TAX0 266 aaPredicted RBP8.33□□□□□ -1.08
TPM3-217ENST00000504663 BSCL2Q96G97 398 aaPredicted RBP8.33□□□□□ -1.08
TPM3-217ENST00000504663 QTRT1Q9BXR0 403 aaKnown RBP8.33□□□□□ -1.08
TPM3-217ENST00000504663 BET1LQ9NYM9 111 aa8.33□□□□□ -1.08
TPM3-217ENST00000504663 NSG2Q9Y328 171 aa8.33□□□□□ -1.08
TPM3-217ENST00000504663 HILPDAQ9Y5L2 63 aa8.33□□□□□ -1.08
TPM3-217ENST00000504663 AUP1Q9Y679 476 aa8.33□□□□□ -1.08
TPM3-217ENST00000504663 IGHV3OR16-10A0A075B7F0 116 aa8.32□□□□□ -1.08
TPM3-217ENST00000504663 FXYD6-FXYD2A0A087WZ82 144 aa8.32□□□□□ -1.08
TPM3-217ENST00000504663 PIGBOS1A0A0B4J2F0 54 aa8.32□□□□□ -1.08
TPM3-217ENST00000504663 CGB1A6NKQ9 187 aa8.32□□□□□ -1.08
TPM3-217ENST00000504663 FAM90A26D6RGX4 464 aa8.32□□□□□ -1.08
TPM3-217ENST00000504663 J3QLI3 93 aa8.32□□□□□ -1.08
TPM3-217ENST00000504663 ST8SIA3O43173 380 aa8.32□□□□□ -1.08
TPM3-217ENST00000504663 GATA3P23771 443 aa8.32□□□□□ -1.08
TPM3-217ENST00000504663 CD1BP29016 333 aa8.32□□□□□ -1.08
TPM3-217ENST00000504663 MC5RP33032 325 aa8.32□□□□□ -1.08
TPM3-217ENST00000504663 RAB13P51153 203 aa8.32□□□□□ -1.08
TPM3-217ENST00000504663 ARHGDIBP52566 201 aa8.32□□□□□ -1.08
TPM3-217ENST00000504663 S100A10P60903 97 aa8.32□□□□□ -1.08
TPM3-217ENST00000504663 UBE2KP61086 200 aa8.32□□□□□ -1.08
TPM3-217ENST00000504663 IFITM2Q01629 132 aa8.32□□□□□ -1.08
TPM3-217ENST00000504663 TNFRSF9Q07011 255 aa8.32□□□□□ -1.08
TPM3-217ENST00000504663 FGL1Q08830 312 aa8.32□□□□□ -1.08
TPM3-217ENST00000504663 THOC7Q6I9Y2 204 aaKnown RBP8.32□□□□□ -1.08
TPM3-217ENST00000504663 ZNF429Q86V71 674 aa8.32□□□□□ -1.08
TPM3-217ENST00000504663 OR4C13Q8NGP0 309 aa8.32□□□□□ -1.08
TPM3-217ENST00000504663 TMEM167AQ8TBQ9 72 aa8.32□□□□□ -1.08
TPM3-217ENST00000504663 PIFOQ8TCI5 191 aa8.32□□□□□ -1.08
TPM3-217ENST00000504663 HARBI1Q96MB7 349 aa8.32□□□□□ -1.08
TPM3-217ENST00000504663 MS4A7Q9GZW8 240 aaPredicted RBP8.32□□□□□ -1.08
TPM3-217ENST00000504663 MAGT1Q9H0U3 335 aa8.32□□□□□ -1.08
TPM3-217ENST00000504663 TMEM14BQ9NUH8 114 aa8.32□□□□□ -1.08
TPM3-217ENST00000504663 FOXA2Q9Y261 457 aaPredicted RBP8.32□□□□□ -1.08
TPM3-217ENST00000504663 LSM5Q9Y4Y9 91 aaKnown RBP8.32□□□□□ -1.08
TPM3-217ENST00000504663 ABCA1O95477 2261 aa8.32□□□□□ -1.08
TPM3-217ENST00000504663 MYO9AB2RTY4 2548 aa8.32□□□□□ -1.08
TPM3-217ENST00000504663 TEX15Q9BXT5 2789 aa8.31□□□□□ -1.08
TPM3-217ENST00000504663 A0A0U1RQK1 487 aa8.31□□□□□ -1.08
TPM3-217ENST00000504663 ARPC5O15511 151 aa8.31□□□□□ -1.08
TPM3-217ENST00000504663 ATG12O94817 140 aa8.31□□□□□ -1.08
TPM3-217ENST00000504663 KBTBD11O94819 623 aa8.31□□□□□ -1.08
TPM3-217ENST00000504663 NDUFA3O95167 84 aa8.31□□□□□ -1.08
TPM3-217ENST00000504663 HRASP01112 189 aa8.31□□□□□ -1.08
TPM3-217ENST00000504663 HKR1P10072 659 aa8.31□□□□□ -1.08
TPM3-217ENST00000504663 CEACAM3P40198 252 aa8.31□□□□□ -1.08
TPM3-217ENST00000504663 VDAC2P45880 294 aaPredicted RBP8.31□□□□□ -1.08
TPM3-217ENST00000504663 ZNF345Q14585 488 aa8.31□□□□□ -1.08
TPM3-217ENST00000504663 PSG5Q15238 335 aa8.31□□□□□ -1.08
TPM3-217ENST00000504663 SSX2Q16385 188 aa8.31□□□□□ -1.08
TPM3-217ENST00000504663 FAM120AOSQ5T036 256 aa8.31□□□□□ -1.08
TPM3-217ENST00000504663 BRD3OSQ6XYD6 125 aa8.31□□□□□ -1.08
TPM3-217ENST00000504663 H2BFWTQ7Z2G1 175 aa8.31□□□□□ -1.08
TPM3-217ENST00000504663 MOB3BQ86TA1 216 aa8.31□□□□□ -1.08
TPM3-217ENST00000504663 KCNRGQ8N5I3 272 aa8.31□□□□□ -1.08
TPM3-217ENST00000504663 TMEM170AQ8WVE7 144 aa8.31□□□□□ -1.08
TPM3-217ENST00000504663 FLYWCH2Q96CP2 140 aaKnown RBP8.31□□□□□ -1.08
TPM3-217ENST00000504663 MALSU1Q96EH3 234 aa8.31□□□□□ -1.08
TPM3-217ENST00000504663 AQP10Q96PS8 301 aa8.31□□□□□ -1.08
TPM3-217ENST00000504663 RBKSQ9H477 322 aa8.31□□□□□ -1.08
TPM3-217ENST00000504663 C7orf69Q9H7B7 122 aa8.31□□□□□ -1.08
TPM3-217ENST00000504663 IGSF23A1L1A6 192 aa8.3□□□□□ -1.08
TPM3-217ENST00000504663 E7EUB6 86 aa8.3□□□□□ -1.08
TPM3-217ENST00000504663 H7C2Y5 167 aa8.3□□□□□ -1.08
TPM3-217ENST00000504663 SHOXO15266 292 aa8.3□□□□□ -1.08
TPM3-217ENST00000504663 SSSCA1O60232 199 aa8.3□□□□□ -1.08
TPM3-217ENST00000504663 TGFAP01135 160 aa8.3□□□□□ -1.08
TPM3-217ENST00000504663 IGKV1D-33P01593 117 aa8.3□□□□□ -1.08
TPM3-217ENST00000504663 IGKV1-33P01594 117 aa8.3□□□□□ -1.08
TPM3-217ENST00000504663 SNRNP70P08621 437 aaKnown RBP8.3□□□□□ -1.08
TPM3-217ENST00000504663 CD24P25063 80 aa8.3□□□□□ -1.08
TPM3-217ENST00000504663 HAPLN4Q86UW8 402 aa8.3□□□□□ -1.08
TPM3-217ENST00000504663 LINC00528Q8N1L1 170 aa8.3□□□□□ -1.08
TPM3-217ENST00000504663 NPBQ8NG41 125 aa8.3□□□□□ -1.08
TPM3-217ENST00000504663 OR52E5Q8NH55 327 aa8.3□□□□□ -1.08
TPM3-217ENST00000504663 RNASE11Q8TAA1 199 aaKnown RBP8.3□□□□□ -1.08
TPM3-217ENST00000504663 THAP6Q8TBB0 222 aa8.3□□□□□ -1.08
TPM3-217ENST00000504663 DCUN1D4Q92564 292 aa8.3□□□□□ -1.08
TPM3-217ENST00000504663 CYTL1Q9NRR1 136 aa8.3□□□□□ -1.08
TPM3-217ENST00000504663 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.3□□□□□ -1.08
TPM3-217ENST00000504663 LYRM2Q9NU23 88 aaPredicted RBP8.3□□□□□ -1.08
TPM3-217ENST00000504663 TCF19Q9Y242 345 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms