RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 PRR19A6NJB7 356 aa5.31□□□□□ -1.56
CLCN3-204ENST00000504131 CD300LBA8K4G0 201 aa5.31□□□□□ -1.56
CLCN3-204ENST00000504131 RPL36A-HNRNPH2H7BZ11 118 aa5.31□□□□□ -1.56
CLCN3-204ENST00000504131 HCRTO43612 131 aa5.31□□□□□ -1.56
CLCN3-204ENST00000504131 ADMP35318 185 aa5.31□□□□□ -1.56
CLCN3-204ENST00000504131 LEPP41159 167 aa5.31□□□□□ -1.56
CLCN3-204ENST00000504131 ZNF324BQ6AW86 544 aaPredicted RBP5.31□□□□□ -1.56
CLCN3-204ENST00000504131 LCN12Q6JVE5 192 aa5.31□□□□□ -1.56
CLCN3-204ENST00000504131 ZC2HC1AQ96GY0 325 aa5.31□□□□□ -1.56
CLCN3-204ENST00000504131 CHCHD5Q9BSY4 110 aa5.31□□□□□ -1.56
CLCN3-204ENST00000504131 SAP30LQ9HAJ7 183 aa5.31□□□□□ -1.56
CLCN3-204ENST00000504131 SLC25A10Q9UBX3 287 aaPredicted RBP5.31□□□□□ -1.56
CLCN3-204ENST00000504131 TCRBV5S2A0A599 114 aa5.31□□□□□ -1.56
CLCN3-204ENST00000504131 NDUFB2O95178 105 aa5.31□□□□□ -1.56
CLCN3-204ENST00000504131 COX6CP09669 75 aa5.31□□□□□ -1.56
CLCN3-204ENST00000504131 BCL2P10415 239 aa5.31□□□□□ -1.56
CLCN3-204ENST00000504131 HOXB2P14652 356 aa5.31□□□□□ -1.56
CLCN3-204ENST00000504131 RND3P61587 244 aa5.31□□□□□ -1.56
CLCN3-204ENST00000504131 SLC38A11Q08AI6 406 aa5.31□□□□□ -1.56
CLCN3-204ENST00000504131 DGAT2L6Q6ZPD8 337 aa5.31□□□□□ -1.56
CLCN3-204ENST00000504131 TMEM256Q8N2U0 113 aa5.31□□□□□ -1.56
CLCN3-204ENST00000504131 FAM19A2Q8N3H0 131 aa5.31□□□□□ -1.56
CLCN3-204ENST00000504131 A0A0J9YY10 115 aa5.31□□□□□ -1.56
CLCN3-204ENST00000504131 NCBP2LA6PVI3 153 aaKnown RBP5.31□□□□□ -1.56
CLCN3-204ENST00000504131 H2BFSP57053 126 aa5.31□□□□□ -1.56
CLCN3-204ENST00000504131 CIRBPQ14011 172 aaKnown RBP5.31□□□□□ -1.56
CLCN3-204ENST00000504131 ZNF678Q5SXM1 525 aa5.31□□□□□ -1.56
CLCN3-204ENST00000504131 MYEOVQ96EZ4 313 aa5.31□□□□□ -1.56
CLCN3-204ENST00000504131 FIZ1Q96SL8 496 aa5.31□□□□□ -1.56
CLCN3-204ENST00000504131 TMEM243Q9BU79 118 aa5.31□□□□□ -1.56
CLCN3-204ENST00000504131 MRPL27Q9P0M9 148 aaKnown RBP5.31□□□□□ -1.56
CLCN3-204ENST00000504131 ASIPP42127 132 aa5.31□□□□□ -1.56
CLCN3-204ENST00000504131 PHLDA2Q53GA4 152 aa5.31□□□□□ -1.56
CLCN3-204ENST00000504131 C3orf22Q8N5N4 141 aa5.31□□□□□ -1.56
CLCN3-204ENST00000504131 ADOQ96SZ5 270 aa5.31□□□□□ -1.56
CLCN3-204ENST00000504131 SCN7AQ01118 1682 aa5.31□□□□□ -1.56
CLCN3-204ENST00000504131 KIF13BQ9NQT8 1826 aa5.31□□□□□ -1.56
CLCN3-204ENST00000504131 C5orf49A4QMS7 147 aa5.31□□□□□ -1.56
CLCN3-204ENST00000504131 C2CD4BA6NLJ0 364 aa5.31□□□□□ -1.56
CLCN3-204ENST00000504131 EMDP50402 254 aa5.31□□□□□ -1.56
CLCN3-204ENST00000504131 FOXG1P55316 489 aaPredicted RBP5.31□□□□□ -1.56
CLCN3-204ENST00000504131 OR2A1Q8NGT9 310 aa5.31□□□□□ -1.56
CLCN3-204ENST00000504131 C10orf105Q8TEF2 133 aa5.31□□□□□ -1.56
CLCN3-204ENST00000504131 VGLL1Q99990 258 aa5.31□□□□□ -1.56
CLCN3-204ENST00000504131 EMC6Q9BV81 110 aa5.31□□□□□ -1.56
CLCN3-204ENST00000504131 A8MWL6 223 aa5.3□□□□□ -1.56
CLCN3-204ENST00000504131 F8VVB4 439 aa5.3□□□□□ -1.56
CLCN3-204ENST00000504131 F8VWA3 439 aa5.3□□□□□ -1.56
CLCN3-204ENST00000504131 UQCRQO14949 82 aa5.3□□□□□ -1.56
CLCN3-204ENST00000504131 CSN3P07498 182 aa5.3□□□□□ -1.56
CLCN3-204ENST00000504131 C1orf220Q5T0J3 134 aa5.3□□□□□ -1.56
CLCN3-204ENST00000504131 NCBP2-AS2Q69YL0 99 aa5.3□□□□□ -1.56
CLCN3-204ENST00000504131 LRTM2Q8N967 370 aa5.3□□□□□ -1.56
CLCN3-204ENST00000504131 NUP43Q8NFH3 380 aa5.3□□□□□ -1.56
CLCN3-204ENST00000504131 ZNF324O75467 553 aaPredicted RBP5.3□□□□□ -1.56
CLCN3-204ENST00000504131 CD68P34810 354 aaPredicted RBP5.3□□□□□ -1.56
CLCN3-204ENST00000504131 SPANXN4Q5MJ08 99 aa5.3□□□□□ -1.56
CLCN3-204ENST00000504131 FAM166AQ6J272 317 aa5.3□□□□□ -1.56
CLCN3-204ENST00000504131 NKX2-4Q9H2Z4 354 aa5.3□□□□□ -1.56
CLCN3-204ENST00000504131 OCIAD1Q9NX40 245 aa5.3□□□□□ -1.56
CLCN3-204ENST00000504131 PLIN4Q96Q06 1357 aa5.3□□□□□ -1.56
CLCN3-204ENST00000504131 CITO14578 2027 aa5.3□□□□□ -1.56
CLCN3-204ENST00000504131 A0A1B0GX78 115 aa5.3□□□□□ -1.56
CLCN3-204ENST00000504131 CBLN1P23435 193 aa5.3□□□□□ -1.56
CLCN3-204ENST00000504131 RPL11P62913 178 aaKnown RBP5.3□□□□□ -1.56
CLCN3-204ENST00000504131 CLDN19Q8N6F1 224 aa5.3□□□□□ -1.56
CLCN3-204ENST00000504131 C8orf46Q8TAG6 207 aa5.3□□□□□ -1.56
CLCN3-204ENST00000504131 CCDC140Q96MF4 163 aa5.3□□□□□ -1.56
CLCN3-204ENST00000504131 MLST8Q9BVC4 326 aa5.3□□□□□ -1.56
CLCN3-204ENST00000504131 TNFRSF19Q9NS68 423 aa5.3□□□□□ -1.56
CLCN3-204ENST00000504131 TRAV9-1A0A075B6T8 112 aa5.3□□□□□ -1.56
CLCN3-204ENST00000504131 CXCL13O43927 109 aa5.3□□□□□ -1.56
CLCN3-204ENST00000504131 AGFG2O95081 481 aa5.3□□□□□ -1.56
CLCN3-204ENST00000504131 FXYD4P59646 89 aa5.3□□□□□ -1.56
CLCN3-204ENST00000504131 PAQR9Q6ZVX9 377 aa5.3□□□□□ -1.56
CLCN3-204ENST00000504131 TP53INP2Q8IXH6 220 aa5.3□□□□□ -1.56
CLCN3-204ENST00000504131 METTL26Q96S19 204 aa5.3□□□□□ -1.56
CLCN3-204ENST00000504131 LINC01587Q99440 93 aa5.3□□□□□ -1.56
CLCN3-204ENST00000504131 TAAR3PQ9P1P4 343 aa5.3□□□□□ -1.56
CLCN3-204ENST00000504131 METRNQ9UJH8 293 aa5.3□□□□□ -1.56
CLCN3-204ENST00000504131 DOT1LQ8TEK3 1739 aa5.3□□□□□ -1.56
CLCN3-204ENST00000504131 LYRM9A8MSI8 78 aa5.29□□□□□ -1.56
CLCN3-204ENST00000504131 A8MZ25 164 aa5.29□□□□□ -1.56
CLCN3-204ENST00000504131 SOCS1O15524 211 aa5.29□□□□□ -1.56
CLCN3-204ENST00000504131 HOXA3O43365 443 aaPredicted RBP5.29□□□□□ -1.56
CLCN3-204ENST00000504131 CST7O76096 145 aa5.29□□□□□ -1.56
CLCN3-204ENST00000504131 TIAF1O95411 115 aa5.29□□□□□ -1.56
CLCN3-204ENST00000504131 CD52P31358 61 aa5.29□□□□□ -1.56
CLCN3-204ENST00000504131 SYNJ2BPP57105 145 aa5.29□□□□□ -1.56
CLCN3-204ENST00000504131 ORMDL2Q53FV1 153 aa5.29□□□□□ -1.56
CLCN3-204ENST00000504131 EEF1DP3Q658K8 133 aa5.29□□□□□ -1.56
CLCN3-204ENST00000504131 BCDIN3DQ7Z5W3 292 aaKnown RBP5.29□□□□□ -1.56
CLCN3-204ENST00000504131 OR5AS1Q8N127 324 aa5.29□□□□□ -1.56
CLCN3-204ENST00000504131 GABARAPL3Q9BY60 117 aa5.29□□□□□ -1.56
CLCN3-204ENST00000504131 SH3BGRL3Q9H299 93 aa5.29□□□□□ -1.56
CLCN3-204ENST00000504131 IL17CQ9P0M4 197 aa5.29□□□□□ -1.56
CLCN3-204ENST00000504131 TMEFF2Q9UIK5 374 aaPredicted RBP5.29□□□□□ -1.56
CLCN3-204ENST00000504131 LAMB1P07942 1786 aa5.29□□□□□ -1.56
CLCN3-204ENST00000504131 DLEC1Q9Y238 1755 aa5.29□□□□□ -1.56
CLCN3-204ENST00000504131 LTBP1Q14766 1721 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms