RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 A0A0A6YYD4 124 aa11.53□□□□□ -0.56
PDLIM7-210ENST00000503827 PNMA8CA0A1B0GUJ8 204 aa11.53□□□□□ -0.56
PDLIM7-210ENST00000503827 IRGMA1A4Y4 181 aa11.53□□□□□ -0.56
PDLIM7-210ENST00000503827 MFSD2BA6NFX1 497 aa11.53□□□□□ -0.56
PDLIM7-210ENST00000503827 LINC00473A8K010 186 aa11.53□□□□□ -0.56
PDLIM7-210ENST00000503827 IL6RP08887 468 aaPredicted RBP11.53□□□□□ -0.56
PDLIM7-210ENST00000503827 CD3GP09693 182 aa11.53□□□□□ -0.56
PDLIM7-210ENST00000503827 MAPK3P27361 379 aaPredicted RBP11.53□□□□□ -0.56
PDLIM7-210ENST00000503827 ZNF124Q15973 351 aa11.53□□□□□ -0.56
PDLIM7-210ENST00000503827 KLK9Q2XQG4 91 aa11.53□□□□□ -0.56
PDLIM7-210ENST00000503827 C1orf100Q5SVJ3 147 aa11.53□□□□□ -0.56
PDLIM7-210ENST00000503827 OR6M1Q8NGM8 313 aa11.53□□□□□ -0.56
PDLIM7-210ENST00000503827 APH1BQ8WW43 257 aa11.53□□□□□ -0.56
PDLIM7-210ENST00000503827 TMEM190Q8WZ59 177 aa11.53□□□□□ -0.56
PDLIM7-210ENST00000503827 URM1Q9BTM9 101 aaKnown RBP11.53□□□□□ -0.56
PDLIM7-210ENST00000503827 DAZ1Q9NQZ3 744 aaKnown RBP11.53□□□□□ -0.56
PDLIM7-210ENST00000503827 KLK9Q9UKQ9 250 aa11.53□□□□□ -0.56
PDLIM7-210ENST00000503827 HSF4Q9ULV5 492 aa11.53□□□□□ -0.56
PDLIM7-210ENST00000503827 TMEM14DPA8MWL7 114 aa11.52□□□□□ -0.57
PDLIM7-210ENST00000503827 FABP7O15540 132 aa11.52□□□□□ -0.57
PDLIM7-210ENST00000503827 CDK2AP2O75956 126 aa11.52□□□□□ -0.57
PDLIM7-210ENST00000503827 CA1P00915 261 aaPredicted RBP11.52□□□□□ -0.57
PDLIM7-210ENST00000503827 CTSDP07339 412 aaPredicted RBP11.52□□□□□ -0.57
PDLIM7-210ENST00000503827 ZNF735P0CB33 412 aa11.52□□□□□ -0.57
PDLIM7-210ENST00000503827 AREGP15514 252 aa11.52□□□□□ -0.57
PDLIM7-210ENST00000503827 HLA-DMBP28068 263 aa11.52□□□□□ -0.57
PDLIM7-210ENST00000503827 C1orf146Q5VVC0 180 aa11.52□□□□□ -0.57
PDLIM7-210ENST00000503827 VSTM2AQ8TAG5 236 aa11.52□□□□□ -0.57
PDLIM7-210ENST00000503827 LPAR5Q9H1C0 372 aa11.52□□□□□ -0.57
PDLIM7-210ENST00000503827 CLEC2DQ9UHP7 191 aa11.52□□□□□ -0.57
PDLIM7-210ENST00000503827 HSPG2P98160 4391 aa11.51□□□□□ -0.57
PDLIM7-210ENST00000503827 IGLV11-55A0A075B6I3 123 aa11.51□□□□□ -0.57
PDLIM7-210ENST00000503827 E7EUB6 86 aa11.51□□□□□ -0.57
PDLIM7-210ENST00000503827 FCGR3BO75015 233 aa11.51□□□□□ -0.57
PDLIM7-210ENST00000503827 BPNT1O95861 308 aa11.51□□□□□ -0.57
PDLIM7-210ENST00000503827 RPA2P15927 270 aa11.51□□□□□ -0.57
PDLIM7-210ENST00000503827 MAS1LP35410 378 aa11.51□□□□□ -0.57
PDLIM7-210ENST00000503827 PSMD7P51665 324 aa11.51□□□□□ -0.57
PDLIM7-210ENST00000503827 TAS2R43P59537 309 aa11.51□□□□□ -0.57
PDLIM7-210ENST00000503827 QRFPP83859 136 aa11.51□□□□□ -0.57
PDLIM7-210ENST00000503827 SMN1Q16637 294 aaKnown RBP11.51□□□□□ -0.57
PDLIM7-210ENST00000503827 IGSF11Q5DX21 431 aa11.51□□□□□ -0.57
PDLIM7-210ENST00000503827 SOHLH1Q5JUK2 328 aa11.51□□□□□ -0.57
PDLIM7-210ENST00000503827 Q6ZTC4 211 aa11.51□□□□□ -0.57
PDLIM7-210ENST00000503827 ZNF502Q8TBZ5 544 aa11.51□□□□□ -0.57
PDLIM7-210ENST00000503827 CABLES2Q9BTV7 478 aa11.51□□□□□ -0.57
PDLIM7-210ENST00000503827 DIMT1Q9UNQ2 313 aaKnown RBP11.51□□□□□ -0.57
PDLIM7-210ENST00000503827 TRBV6-7A0A0A0MS04 114 aa11.5□□□□□ -0.57
PDLIM7-210ENST00000503827 LOC100130705A0A1B0GUX0 176 aa11.5□□□□□ -0.57
PDLIM7-210ENST00000503827 MRPS14O60783 128 aaKnown RBP11.5□□□□□ -0.57
PDLIM7-210ENST00000503827 KBTBD11O94819 623 aa11.5□□□□□ -0.57
PDLIM7-210ENST00000503827 ARFRP1Q13795 201 aa11.5□□□□□ -0.57
PDLIM7-210ENST00000503827 FAM89BQ8N5H3 189 aa11.5□□□□□ -0.57
PDLIM7-210ENST00000503827 Q8NAQ8 132 aa11.5□□□□□ -0.57
PDLIM7-210ENST00000503827 ARHGAP5-AS1Q96IT6 56 aa11.5□□□□□ -0.57
PDLIM7-210ENST00000503827 OR2A7Q96R45 310 aa11.5□□□□□ -0.57
PDLIM7-210ENST00000503827 A0A1B0GW64 132 aa11.49□□□□□ -0.57
PDLIM7-210ENST00000503827 TGOLN2O43493 480 aa11.49□□□□□ -0.57
PDLIM7-210ENST00000503827 DIRAS3O95661 229 aa11.49□□□□□ -0.57
PDLIM7-210ENST00000503827 AMBPP02760 352 aa11.49□□□□□ -0.57
PDLIM7-210ENST00000503827 REG1AP05451 166 aa11.49□□□□□ -0.57
PDLIM7-210ENST00000503827 TMEM50BP56557 158 aa11.49□□□□□ -0.57
PDLIM7-210ENST00000503827 MRPS15P82914 257 aaKnown RBP11.49□□□□□ -0.57
PDLIM7-210ENST00000503827 SSX9Q7RTT3 188 aa11.49□□□□□ -0.57
PDLIM7-210ENST00000503827 VKORC1L1Q8N0U8 176 aa11.49□□□□□ -0.57
PDLIM7-210ENST00000503827 CBR4Q8N4T8 237 aa11.49□□□□□ -0.57
PDLIM7-210ENST00000503827 ZNF485Q8NCK3 441 aa11.49□□□□□ -0.57
PDLIM7-210ENST00000503827 TMEM167AQ8TBQ9 72 aa11.49□□□□□ -0.57
PDLIM7-210ENST00000503827 GINS4Q9BRT9 223 aa11.49□□□□□ -0.57
PDLIM7-210ENST00000503827 PECRQ9BY49 303 aa11.49□□□□□ -0.57
PDLIM7-210ENST00000503827 THYN1Q9P016 225 aa11.49□□□□□ -0.57
PDLIM7-210ENST00000503827 MRPS7Q9Y2R9 242 aaKnown RBP11.49□□□□□ -0.57
PDLIM7-210ENST00000503827 PRELID3BQ9Y3B1 194 aa11.49□□□□□ -0.57
PDLIM7-210ENST00000503827 FOXI3A8MTJ6 420 aaPredicted RBP11.48□□□□□ -0.57
PDLIM7-210ENST00000503827 ATP8B1O43520 1251 aa11.48□□□□□ -0.57
PDLIM7-210ENST00000503827 WBP4O75554 376 aaKnown RBP11.48□□□□□ -0.57
PDLIM7-210ENST00000503827 CD1AP06126 327 aa11.48□□□□□ -0.57
PDLIM7-210ENST00000503827 RBMY1A1P0DJD3 496 aaKnown RBP11.48□□□□□ -0.57
PDLIM7-210ENST00000503827 RBMY1CP0DJD4 496 aa11.48□□□□□ -0.57
PDLIM7-210ENST00000503827 CELP19835 753 aa11.48□□□□□ -0.57
PDLIM7-210ENST00000503827 PTBP1P26599 531 aaKnown RBP eCLIP11.48□□□□□ -0.57
PDLIM7-210ENST00000503827 TFPI2P48307 235 aa11.48□□□□□ -0.57
PDLIM7-210ENST00000503827 RBMY1FQ15415 496 aaKnown RBP11.48□□□□□ -0.57
PDLIM7-210ENST00000503827 RBM48Q5RL73 367 aaKnown RBP11.48□□□□□ -0.57
PDLIM7-210ENST00000503827 KCTD9Q7L273 389 aa11.48□□□□□ -0.57
PDLIM7-210ENST00000503827 LRRTM1Q86UE6 522 aa11.48□□□□□ -0.57
PDLIM7-210ENST00000503827 TMEM80Q96HE8 168 aa11.48□□□□□ -0.57
PDLIM7-210ENST00000503827 NDUFAF3Q9BU61 184 aa11.48□□□□□ -0.57
PDLIM7-210ENST00000503827 C20orf24Q9BUV8 137 aa11.48□□□□□ -0.57
PDLIM7-210ENST00000503827 IGHV4-28A0A0C4DH34 117 aa11.47□□□□□ -0.57
PDLIM7-210ENST00000503827 C15orf61A6NNL5 157 aa11.47□□□□□ -0.57
PDLIM7-210ENST00000503827 C16orf90A8MZG2 172 aa11.47□□□□□ -0.57
PDLIM7-210ENST00000503827 K7EMT4 169 aa11.47□□□□□ -0.57
PDLIM7-210ENST00000503827 NDUFA4O00483 81 aa11.47□□□□□ -0.57
PDLIM7-210ENST00000503827 CRHBPP24387 322 aa11.47□□□□□ -0.57
PDLIM7-210ENST00000503827 IRF3Q14653 427 aa11.47□□□□□ -0.57
PDLIM7-210ENST00000503827 OR2B11Q5JQS5 317 aa11.47□□□□□ -0.57
PDLIM7-210ENST00000503827 PUSL1Q8N0Z8 303 aaKnown RBP11.47□□□□□ -0.57
PDLIM7-210ENST00000503827 Q8N1X5 172 aa11.47□□□□□ -0.57
PDLIM7-210ENST00000503827 ETV7Q9Y603 341 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms