RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 TMEM14BQ9NUH8 114 aa6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 HIF1ANQ9NWT6 349 aa6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 OR5AC2Q9NZP5 309 aa6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 NUP50Q9UKX7 468 aa6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 IGHV1-69DA0A0B4J2H0 117 aa6.56□□□□□ -1.36
TOPBP1-202ENST00000503338 CEBPZOSA8MTT3 80 aa6.56□□□□□ -1.36
TOPBP1-202ENST00000503338 TIMM23O14925 209 aa6.56□□□□□ -1.36
TOPBP1-202ENST00000503338 BCL2L11O43521 198 aa6.56□□□□□ -1.36
TOPBP1-202ENST00000503338 KBTBD11O94819 623 aa6.56□□□□□ -1.36
TOPBP1-202ENST00000503338 VENTXO95231 258 aa6.56□□□□□ -1.36
TOPBP1-202ENST00000503338 MOSP00540 346 aa6.56□□□□□ -1.36
TOPBP1-202ENST00000503338 IGHV1-69P01742 117 aa6.56□□□□□ -1.36
TOPBP1-202ENST00000503338 OR9G9P0C7N8 305 aa6.56□□□□□ -1.36
TOPBP1-202ENST00000503338 FAM106CPP0CH98 169 aa6.56□□□□□ -1.36
TOPBP1-202ENST00000503338 SAA1P0DJI8 122 aaPredicted RBP6.56□□□□□ -1.36
TOPBP1-202ENST00000503338 HKR1P10072 659 aa6.56□□□□□ -1.36
TOPBP1-202ENST00000503338 CAV2P51636 162 aa6.56□□□□□ -1.36
TOPBP1-202ENST00000503338 HSPE1P61604 102 aaKnown RBP6.56□□□□□ -1.36
TOPBP1-202ENST00000503338 RPL8P62917 257 aaKnown RBP6.56□□□□□ -1.36
TOPBP1-202ENST00000503338 UBA52P62987 128 aaKnown RBP6.56□□□□□ -1.36
TOPBP1-202ENST00000503338 DIAPH2-AS1Q14236 149 aa6.56□□□□□ -1.36
TOPBP1-202ENST00000503338 STX12Q86Y82 276 aa6.56□□□□□ -1.36
TOPBP1-202ENST00000503338 OR8H1Q8NGG4 311 aa6.56□□□□□ -1.36
TOPBP1-202ENST00000503338 OR2T10Q8NGZ9 312 aa6.56□□□□□ -1.36
TOPBP1-202ENST00000503338 TMEM167AQ8TBQ9 72 aa6.56□□□□□ -1.36
TOPBP1-202ENST00000503338 DTD1Q8TEA8 209 aa6.56□□□□□ -1.36
TOPBP1-202ENST00000503338 Q96MF0 132 aa6.56□□□□□ -1.36
TOPBP1-202ENST00000503338 C11orf1Q9H5F2 150 aa6.56□□□□□ -1.36
TOPBP1-202ENST00000503338 PSENENQ9NZ42 101 aa6.56□□□□□ -1.36
TOPBP1-202ENST00000503338 C1RLQ9NZP8 487 aa6.56□□□□□ -1.36
TOPBP1-202ENST00000503338 KIAA1456Q9P272 454 aa6.56□□□□□ -1.36
TOPBP1-202ENST00000503338 HILPDAQ9Y5L2 63 aa6.56□□□□□ -1.36
TOPBP1-202ENST00000503338 BORCS7-ASMTA0A0B4J1R7 106 aa6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 CENPVL3A0A0U1RRI6 287 aa6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 A0A1W2PN81 502 aa6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 SRRM4A7MD48 611 aaKnown RBP6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 RNF223E7ERA6 249 aa6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 DFFBO76075 338 aa6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 JTBO76095 146 aa6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 ACTL6BO94805 426 aa6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 IFNA7P01567 189 aa6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 SAA4P35542 130 aa6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 CHRNA7P36544 502 aa6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 DYNLT3P51808 116 aa6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 F2RL1P55085 397 aa6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 DLX1P56177 255 aa6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 HBG1P69891 147 aa6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 HBG2P69892 147 aa6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 EBI3Q14213 229 aa6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 ZNF266Q14584 549 aa6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 SSX2Q16385 188 aa6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 IZUMO4Q1ZYL8 232 aa6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 TMEM249Q2WGJ8 235 aa6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 CYB5R2Q6BCY4 276 aa6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 EIF5AL1Q6IS14 154 aaKnown RBP6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 ZNF767PQ75MW2 155 aa6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 LHFPL4Q7Z7J7 247 aa6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 MMD2Q8IY49 270 aa6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 VKORC1L1Q8N0U8 176 aa6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 TMEM252Q8N6L7 170 aa6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 OR1L8Q8NGR8 309 aa6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 CFHR4Q92496 578 aa6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 PHYHIPLQ96FC7 376 aa6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 QTRT1Q9BXR0 403 aaKnown RBP6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 COMMD5Q9GZQ3 224 aa6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 MAGT1Q9H0U3 335 aa6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 RBKSQ9H477 322 aa6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 PLSCR3Q9NRY6 295 aa6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 TCF19Q9Y242 345 aa6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 STRAPQ9Y3F4 350 aaKnown RBP6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 OR51B2Q9Y5P1 312 aa6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 U3KQ87 197 aa6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 WNK2Q9Y3S1 2297 aa6.55□□□□□ -1.36
TOPBP1-202ENST00000503338 MED13LQ71F56 2210 aa6.54□□□□□ -1.36
TOPBP1-202ENST00000503338 ARHGAP32A7KAX9 2087 aa6.54□□□□□ -1.36
TOPBP1-202ENST00000503338 NAV2Q8IVL1 2488 aa6.54□□□□□ -1.36
TOPBP1-202ENST00000503338 IGHV3-72A0A0B4J1Y9 119 aa6.54□□□□□ -1.36
TOPBP1-202ENST00000503338 TRAV40A0A0B4J280 105 aa6.54□□□□□ -1.36
TOPBP1-202ENST00000503338 INS-IGF2F8WCM5 200 aa6.54□□□□□ -1.36
TOPBP1-202ENST00000503338 RGS13O14921 159 aa6.54□□□□□ -1.36
TOPBP1-202ENST00000503338 TSPAN9O75954 239 aa6.54□□□□□ -1.36
TOPBP1-202ENST00000503338 NDUFA3O95167 84 aa6.54□□□□□ -1.36
TOPBP1-202ENST00000503338 TGFAP01135 160 aa6.54□□□□□ -1.36
TOPBP1-202ENST00000503338 IGLV2-23P01705 113 aa6.54□□□□□ -1.36
TOPBP1-202ENST00000503338 SNRNP70P08621 437 aaKnown RBP6.54□□□□□ -1.36
TOPBP1-202ENST00000503338 IGHV4-31P0DP07 118 aa6.54□□□□□ -1.36
TOPBP1-202ENST00000503338 TPT1P13693 172 aaKnown RBP6.54□□□□□ -1.36
TOPBP1-202ENST00000503338 HOXA1P49639 335 aaPredicted RBP6.54□□□□□ -1.36
TOPBP1-202ENST00000503338 SULT1A1P50225 295 aa6.54□□□□□ -1.36
TOPBP1-202ENST00000503338 OR2B8PP59922 312 aa6.54□□□□□ -1.36
TOPBP1-202ENST00000503338 RAB11AP62491 216 aa6.54□□□□□ -1.36
TOPBP1-202ENST00000503338 PRCDQ00LT1 54 aa6.54□□□□□ -1.36
TOPBP1-202ENST00000503338 EWSR1Q01844 656 aaKnown RBP eCLIP6.54□□□□□ -1.36
TOPBP1-202ENST00000503338 PRB3Q04118 309 aaPredicted RBP6.54□□□□□ -1.36
TOPBP1-202ENST00000503338 AANATQ16613 207 aa6.54□□□□□ -1.36
TOPBP1-202ENST00000503338 HIST2H2BCQ6DN03 193 aa6.54□□□□□ -1.36
TOPBP1-202ENST00000503338 HSD17B13Q7Z5P4 300 aaPredicted RBP6.54□□□□□ -1.36
TOPBP1-202ENST00000503338 KRTAP1-3Q8IUG1 177 aa6.54□□□□□ -1.36
TOPBP1-202ENST00000503338 PDZD9Q8IXQ8 264 aa6.54□□□□□ -1.36
TOPBP1-202ENST00000503338 STPG2Q8N412 459 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms