RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 PEF1Q9UBV8 284 aaKnown RBP12.41□□□□□ -0.42
SCLT1-204ENST00000503215 ANXA10Q9UJ72 324 aa12.41□□□□□ -0.42
SCLT1-204ENST00000503215 HMX3A6NHT5 357 aa12.4□□□□□ -0.42
SCLT1-204ENST00000503215 E7EUB6 86 aa12.4□□□□□ -0.42
SCLT1-204ENST00000503215 CTXN2P0C2S0 81 aa12.4□□□□□ -0.42
SCLT1-204ENST00000503215 AADACP22760 399 aa12.4□□□□□ -0.42
SCLT1-204ENST00000503215 TGFBR1P36897 503 aa12.4□□□□□ -0.42
SCLT1-204ENST00000503215 RHOGP84095 191 aa12.4□□□□□ -0.42
SCLT1-204ENST00000503215 KCTD9Q7L273 389 aa12.4□□□□□ -0.42
SCLT1-204ENST00000503215 AKAP14Q86UN6 197 aa12.4□□□□□ -0.42
SCLT1-204ENST00000503215 SPATA2Q9UM82 520 aa12.4□□□□□ -0.42
SCLT1-204ENST00000503215 A0A1B0GW64 132 aa12.39□□□□□ -0.43
SCLT1-204ENST00000503215 CSN3P07498 182 aa12.39□□□□□ -0.43
SCLT1-204ENST00000503215 CD36P16671 472 aa12.39□□□□□ -0.43
SCLT1-204ENST00000503215 CDK10Q15131 360 aa12.39□□□□□ -0.43
SCLT1-204ENST00000503215 OR9G4Q8NGQ1 327 aa12.39□□□□□ -0.43
SCLT1-204ENST00000503215 DYNC2LI1Q8TCX1 351 aa12.39□□□□□ -0.43
SCLT1-204ENST00000503215 USMG5Q96IX5 58 aa12.39□□□□□ -0.43
SCLT1-204ENST00000503215 TAS2R8Q9NYW2 309 aa12.39□□□□□ -0.43
SCLT1-204ENST00000503215 RYR3Q15413 4870 aa12.39□□□□□ -0.43
SCLT1-204ENST00000503215 MPPED1O15442 326 aa12.38□□□□□ -0.43
SCLT1-204ENST00000503215 MYOD1P15172 320 aa12.38□□□□□ -0.43
SCLT1-204ENST00000503215 ARPC4P59998 168 aa12.38□□□□□ -0.43
SCLT1-204ENST00000503215 TCTEX1D2Q8WW35 142 aa12.38□□□□□ -0.43
SCLT1-204ENST00000503215 YIPF6Q96EC8 236 aa12.38□□□□□ -0.43
SCLT1-204ENST00000503215 RCHY1Q96PM5 261 aa12.38□□□□□ -0.43
SCLT1-204ENST00000503215 CCL28Q9NRJ3 127 aa12.38□□□□□ -0.43
SCLT1-204ENST00000503215 TRBV9A0A0B4J1U6 114 aa12.37□□□□□ -0.43
SCLT1-204ENST00000503215 IZUMO1RA6ND01 250 aa12.37□□□□□ -0.43
SCLT1-204ENST00000503215 TEX22C9J3V5 150 aa12.37□□□□□ -0.43
SCLT1-204ENST00000503215 BMPR1BO00238 502 aa12.37□□□□□ -0.43
SCLT1-204ENST00000503215 TNFSF12O43508 249 aa12.37□□□□□ -0.43
SCLT1-204ENST00000503215 UPK1BO75841 260 aa12.37□□□□□ -0.43
SCLT1-204ENST00000503215 IL6RP08887 468 aaPredicted RBP12.37□□□□□ -0.43
SCLT1-204ENST00000503215 IGHV4-30-4P0DP06 118 aa12.37□□□□□ -0.43
SCLT1-204ENST00000503215 FCGR2CP31995 323 aa12.37□□□□□ -0.43
SCLT1-204ENST00000503215 LCE2DQ5TA82 110 aaPredicted RBP12.37□□□□□ -0.43
SCLT1-204ENST00000503215 ADAMTSL5Q6ZMM2 481 aa12.37□□□□□ -0.43
SCLT1-204ENST00000503215 MMD2Q8IY49 270 aa12.37□□□□□ -0.43
SCLT1-204ENST00000503215 BEST4Q8NFU0 473 aa12.37□□□□□ -0.43
SCLT1-204ENST00000503215 AUNIPQ9H7T9 357 aa12.37□□□□□ -0.43
SCLT1-204ENST00000503215 PRELID3BQ9Y3B1 194 aa12.37□□□□□ -0.43
SCLT1-204ENST00000503215 OR2J3O76001 311 aa12.36□□□□□ -0.43
SCLT1-204ENST00000503215 SCGNO76038 276 aa12.36□□□□□ -0.43
SCLT1-204ENST00000503215 ACTL6BO94805 426 aa12.36□□□□□ -0.43
SCLT1-204ENST00000503215 DEFA1P59665 94 aa12.36□□□□□ -0.43
SCLT1-204ENST00000503215 DEFA3P59666 94 aa12.36□□□□□ -0.43
SCLT1-204ENST00000503215 ATP5G2Q06055 141 aa12.36□□□□□ -0.43
SCLT1-204ENST00000503215 EXOSC2Q13868 293 aaKnown RBP12.36□□□□□ -0.43
SCLT1-204ENST00000503215 RPEL1Q2QD12 228 aa12.36□□□□□ -0.43
SCLT1-204ENST00000503215 SSX9Q7RTT3 188 aa12.36□□□□□ -0.43
SCLT1-204ENST00000503215 HOGA1Q86XE5 327 aa12.36□□□□□ -0.43
SCLT1-204ENST00000503215 PUSL1Q8N0Z8 303 aaKnown RBP12.36□□□□□ -0.43
SCLT1-204ENST00000503215 TTC9CQ8N5M4 171 aa12.36□□□□□ -0.43
SCLT1-204ENST00000503215 SECTM1Q8WVN6 248 aa12.36□□□□□ -0.43
SCLT1-204ENST00000503215 ZNF486Q96H40 463 aaPredicted RBP12.36□□□□□ -0.43
SCLT1-204ENST00000503215 HSD17B10Q99714 261 aaKnown RBP12.36□□□□□ -0.43
SCLT1-204ENST00000503215 SPIN2AQ99865 258 aa12.36□□□□□ -0.43
SCLT1-204ENST00000503215 SPIN2BQ9BPZ2 258 aa12.36□□□□□ -0.43
SCLT1-204ENST00000503215 MRPS7Q9Y2R9 242 aaKnown RBP12.36□□□□□ -0.43
SCLT1-204ENST00000503215 ETV7Q9Y603 341 aa12.36□□□□□ -0.43
SCLT1-204ENST00000503215 MEIS3P1A6NDR6 274 aa12.35□□□□□ -0.43
SCLT1-204ENST00000503215 SLC22A5O76082 557 aa12.35□□□□□ -0.43
SCLT1-204ENST00000503215 OR2A4O95047 310 aa12.35□□□□□ -0.43
SCLT1-204ENST00000503215 TRAPPC2P0DI81 140 aa12.35□□□□□ -0.43
SCLT1-204ENST00000503215 TRAPPC2BP0DI82 140 aa12.35□□□□□ -0.43
SCLT1-204ENST00000503215 EDN2P20800 178 aa12.35□□□□□ -0.43
SCLT1-204ENST00000503215 OR4S2Q8NH73 311 aa12.35□□□□□ -0.43
SCLT1-204ENST00000503215 SNAPC3Q92966 411 aa12.35□□□□□ -0.43
SCLT1-204ENST00000503215 FYTTD1Q96QD9 318 aaKnown RBP12.35□□□□□ -0.43
SCLT1-204ENST00000503215 OR2A7Q96R45 310 aa12.35□□□□□ -0.43
SCLT1-204ENST00000503215 THAP7Q9BT49 309 aaPredicted RBP12.35□□□□□ -0.43
SCLT1-204ENST00000503215 C19orf73Q9NVV2 129 aa12.35□□□□□ -0.43
SCLT1-204ENST00000503215 DMRT1Q9Y5R6 373 aa12.35□□□□□ -0.43
SCLT1-204ENST00000503215 S4R3C0 116 aa12.35□□□□□ -0.43
SCLT1-204ENST00000503215 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.34□□□□□ -0.43
SCLT1-204ENST00000503215 FAM223BA6NKX1 122 aa12.34□□□□□ -0.43
SCLT1-204ENST00000503215 PPP5D1E7EU14 171 aa12.34□□□□□ -0.43
SCLT1-204ENST00000503215 KBTBD11O94819 623 aa12.34□□□□□ -0.43
SCLT1-204ENST00000503215 IGHV3-23P01764 117 aa12.34□□□□□ -0.43
SCLT1-204ENST00000503215 HLA-AP01891 365 aaKnown RBP12.34□□□□□ -0.43
SCLT1-204ENST00000503215 AREGP15514 252 aa12.34□□□□□ -0.43
SCLT1-204ENST00000503215 MECP2P51608 486 aaKnown RBP12.34□□□□□ -0.43
SCLT1-204ENST00000503215 SCAND1P57086 179 aa12.34□□□□□ -0.43
SCLT1-204ENST00000503215 FAM223AQ8IWN6 122 aa12.34□□□□□ -0.43
SCLT1-204ENST00000503215 TMEM167AQ8TBQ9 72 aa12.34□□□□□ -0.43
SCLT1-204ENST00000503215 TRIM63Q969Q1 353 aa12.34□□□□□ -0.43
SCLT1-204ENST00000503215 NXF2Q9GZY0 626 aaKnown RBP12.34□□□□□ -0.43
SCLT1-204ENST00000503215 CGB1A6NKQ9 187 aa12.33□□□□□ -0.44
SCLT1-204ENST00000503215 NDUFB8O95169 186 aa12.33□□□□□ -0.44
SCLT1-204ENST00000503215 PPYP01298 95 aa12.33□□□□□ -0.44
SCLT1-204ENST00000503215 APOA1P02647 267 aa12.33□□□□□ -0.44
SCLT1-204ENST00000503215 ETV6P41212 452 aa12.33□□□□□ -0.44
SCLT1-204ENST00000503215 RPL27AP46776 148 aaKnown RBP12.33□□□□□ -0.44
SCLT1-204ENST00000503215 C15orf32Q32M92 178 aa12.33□□□□□ -0.44
SCLT1-204ENST00000503215 ZNF66Q6ZN08 573 aa12.33□□□□□ -0.44
SCLT1-204ENST00000503215 NECAP1Q8NC96 275 aa12.33□□□□□ -0.44
SCLT1-204ENST00000503215 FANCD2OSQ96PS1 177 aa12.33□□□□□ -0.44
SCLT1-204ENST00000503215 SLIRPQ9GZT3 109 aaKnown RBP12.33□□□□□ -0.44
SCLT1-204ENST00000503215 SLC5A7Q9GZV3 580 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms