RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 TMEM187Q14656 261 aa4.87□□□□□ -1.63
SOX2-OT-218ENST00000498731 CCDC144NLQ6NUI1 221 aa4.87□□□□□ -1.63
SOX2-OT-218ENST00000498731 SLC23A3Q6PIS1 610 aa4.87□□□□□ -1.63
SOX2-OT-218ENST00000498731 ASCL4Q6XD76 172 aa4.87□□□□□ -1.63
SOX2-OT-218ENST00000498731 ACP7Q6ZNF0 438 aa4.87□□□□□ -1.63
SOX2-OT-218ENST00000498731 UEVLDQ8IX04 471 aa4.87□□□□□ -1.63
SOX2-OT-218ENST00000498731 RTN4IP1Q8WWV3 396 aaPredicted RBP4.87□□□□□ -1.63
SOX2-OT-218ENST00000498731 GMPPAQ96IJ6 420 aaPredicted RBP4.87□□□□□ -1.63
SOX2-OT-218ENST00000498731 CLEC7AQ9BXN2 247 aa4.87□□□□□ -1.63
SOX2-OT-218ENST00000498731 PRRG4Q9BZD6 226 aa4.87□□□□□ -1.63
SOX2-OT-218ENST00000498731 C1orf123Q9NWV4 160 aa4.87□□□□□ -1.63
SOX2-OT-218ENST00000498731 ZNF586Q9NXT0 402 aa4.87□□□□□ -1.63
SOX2-OT-218ENST00000498731 CISD1Q9NZ45 108 aaKnown RBP4.87□□□□□ -1.63
SOX2-OT-218ENST00000498731 TAAR3PQ9P1P4 343 aa4.87□□□□□ -1.63
SOX2-OT-218ENST00000498731 LRP4O75096 1905 aa4.87□□□□□ -1.63
SOX2-OT-218ENST00000498731 RELNP78509 3460 aa4.87□□□□□ -1.63
SOX2-OT-218ENST00000498731 FAM166BA8MTA8 275 aa4.87□□□□□ -1.63
SOX2-OT-218ENST00000498731 GDF1P27539 372 aa4.87□□□□□ -1.63
SOX2-OT-218ENST00000498731 OPRM1P35372 400 aa4.87□□□□□ -1.63
SOX2-OT-218ENST00000498731 CLDN15P56746 228 aa4.87□□□□□ -1.63
SOX2-OT-218ENST00000498731 ACOT6Q3I5F7 207 aaPredicted RBP4.87□□□□□ -1.63
SOX2-OT-218ENST00000498731 ATP1A1-AS1Q5TC04 95 aa4.87□□□□□ -1.63
SOX2-OT-218ENST00000498731 HES3Q5TGS1 186 aa4.87□□□□□ -1.63
SOX2-OT-218ENST00000498731 SPINK14Q6IE38 97 aa4.87□□□□□ -1.63
SOX2-OT-218ENST00000498731 WDR82Q6UXN9 313 aa4.87□□□□□ -1.63
SOX2-OT-218ENST00000498731 COLCA1Q6ZS62 124 aa4.87□□□□□ -1.63
SOX2-OT-218ENST00000498731 TMEM252Q8N6L7 170 aa4.87□□□□□ -1.63
SOX2-OT-218ENST00000498731 OR51I2Q9H344 312 aa4.87□□□□□ -1.63
SOX2-OT-218ENST00000498731 TNFRSF18Q9Y5U5 241 aa4.87□□□□□ -1.63
SOX2-OT-218ENST00000498731 HECTD1Q9ULT8 2610 aa4.87□□□□□ -1.63
SOX2-OT-218ENST00000498731 PTPN13Q12923 2485 aa4.87□□□□□ -1.63
SOX2-OT-218ENST00000498731 TRBV20OR9-2A0A075B6H5 130 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 A0A087X0K7 114 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 FAM230AA0A1W2PPH8 454 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 CRYM-AS1A6NIL9 109 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 C10orf142B7Z368 130 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 C9orf172C9J069 976 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 NPIPA3F8WFD2 350 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 CDX4O14627 284 aaPredicted RBP4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 HPNP05981 417 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 CCNOP22674 350 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 CA7P43166 264 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 GPR6P46095 362 aaPredicted RBP4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 TCTAP57738 103 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 TPPP2P59282 170 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 HERV-K104P63124 156 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 HLA-DRB5Q30154 266 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 VAX1Q5SQQ9 334 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 C1orf100Q5SVJ3 147 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 Q6ZPA2 131 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 ZNF788Q6ZQV5 615 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 TCTEX1D1Q8N7M0 179 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 NFAM1Q8NET5 270 aaPredicted RBP4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 OR4B1Q8NGF8 309 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 OR2Y1Q8NGV0 311 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 NEU4Q8WWR8 484 aaPredicted RBP4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 POM121L2Q96KW2 1035 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 ZNF48Q96MX3 618 aaPredicted RBP4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 OR5B12Q96R08 314 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 SMDT1Q9H4I9 107 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 ZDHHC11Q9H8X9 412 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 A0A1W2PS18 150 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 hDV102S1A0JD36 115 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 F5H5K5 113 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 H0Y8G0 127 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 PLPP3O14495 311 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 TYMSP04818 313 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 ASAH2BP0C7U1 165 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 BVES-AS1Q5T3Y7 98 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 CRIP3Q6Q6R5 217 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 GLIPR1L1Q6UWM5 242 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 C6orf201Q7Z4U5 140 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 LRRC75AQ8NAA5 344 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 OTOSQ8NHW6 89 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 MRPL27Q9P0M9 148 aaKnown RBP4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 NAT8Q9UHE5 227 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 IGKV1D-43A0A0B4J1Z2 117 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 FAM231BA6NCW3 169 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 SH2D7A6NKC9 451 aaPredicted RBP4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 E9PLN8 166 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 TNFSF11O14788 317 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 ARPC3O15145 178 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 CLDN14O95500 239 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 HIST1H1DP16402 221 aaKnown RBP4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 ARFRP1Q13795 201 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 ZNF766Q5HY98 468 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 FNDC7Q5VTL7 733 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 PLCXD3Q63HM9 321 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 SLC18B1Q6NT16 456 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 EBLN2Q6P2I7 272 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 LINC00114Q6XXX2 140 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 CYP2G1PQ6ZSU1 146 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 BHLHA15Q7RTS1 189 aaPredicted RBP4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 BAGE3Q86Y29 109 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 BAGE2Q86Y30 109 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 SGMS2Q8NHU3 365 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 MSI2Q96DH6 328 aaKnown RBP4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 SIGLEC12Q96PQ1 595 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 TMEM38BQ9NVV0 291 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 IGSF10Q6WRI0 2623 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms