RNA–Protein interactions for RNA: ENST00000497282.1

EFNA1-205, Transcript of ephrin A1, human

TSL 2

Gene EFNA1, Length 719 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFNA1-205	ENST00000497282	IL6R	P08887	468 aa	Predicted RBP	6.28	□□□□□ -1.4
EFNA1-205	ENST00000497282	APELA	P0DMC3	54 aa		6.28	□□□□□ -1.4
EFNA1-205	ENST00000497282	IL7	P13232	177 aa		6.28	□□□□□ -1.4
EFNA1-205	ENST00000497282	NQO2	P16083	231 aa		6.28	□□□□□ -1.4
EFNA1-205	ENST00000497282	CHRNA7	P36544	502 aa		6.28	□□□□□ -1.4
EFNA1-205	ENST00000497282	LPAR6	P43657	344 aa		6.28	□□□□□ -1.4
EFNA1-205	ENST00000497282	TAS2R31	P59538	309 aa		6.28	□□□□□ -1.4
EFNA1-205	ENST00000497282	SLC35B1	P78383	322 aa		6.28	□□□□□ -1.4
EFNA1-205	ENST00000497282	ZNF45	Q02386	682 aa		6.28	□□□□□ -1.4
EFNA1-205	ENST00000497282	FOXE3	Q13461	319 aa		6.28	□□□□□ -1.4
EFNA1-205	ENST00000497282	SURF2	Q15527	256 aa	Predicted RBP	6.28	□□□□□ -1.4
EFNA1-205	ENST00000497282	C2orf68	Q2NKX9	166 aa		6.28	□□□□□ -1.4
EFNA1-205	ENST00000497282	KHDC1L	Q5JSQ8	128 aa		6.28	□□□□□ -1.4
EFNA1-205	ENST00000497282	ZNF57	Q68EA5	555 aa	Predicted RBP	6.28	□□□□□ -1.4
EFNA1-205	ENST00000497282	TEX38	Q6PEX7	206 aa		6.28	□□□□□ -1.4
EFNA1-205	ENST00000497282	UNQ5815/PRO19632	Q6UWF5	114 aa		6.28	□□□□□ -1.4
EFNA1-205	ENST00000497282	MMD2	Q8IY49	270 aa		6.28	□□□□□ -1.4
EFNA1-205	ENST00000497282	GDPD1	Q8N9F7	314 aa		6.28	□□□□□ -1.4
EFNA1-205	ENST00000497282	POC5	Q8NA72	575 aa		6.28	□□□□□ -1.4
EFNA1-205	ENST00000497282	LFNG	Q8NES3	379 aa		6.28	□□□□□ -1.4
EFNA1-205	ENST00000497282	MYOZ3	Q8TDC0	251 aa		6.28	□□□□□ -1.4
EFNA1-205	ENST00000497282	CD300LF	Q8TDQ1	290 aa		6.28	□□□□□ -1.4
EFNA1-205	ENST00000497282	SRSF12	Q8WXF0	261 aa	Known RBP	6.28	□□□□□ -1.4
EFNA1-205	ENST00000497282	TMEM230	Q96A57	120 aa		6.28	□□□□□ -1.4
EFNA1-205	ENST00000497282	OR2A7	Q96R45	310 aa		6.28	□□□□□ -1.4
EFNA1-205	ENST00000497282	PRRT1	Q99946	306 aa		6.28	□□□□□ -1.4
EFNA1-205	ENST00000497282	RTBDN	Q9BSG5	229 aa	Predicted RBP	6.28	□□□□□ -1.4
EFNA1-205	ENST00000497282	KLK15	Q9H2R5	256 aa		6.28	□□□□□ -1.4
EFNA1-205	ENST00000497282	TMEM140	Q9NV12	185 aa		6.28	□□□□□ -1.4
EFNA1-205	ENST00000497282	BET1L	Q9NYM9	111 aa		6.28	□□□□□ -1.4
EFNA1-205	ENST00000497282	GPR132	Q9UNW8	380 aa		6.28	□□□□□ -1.4
EFNA1-205	ENST00000497282	TSSC4	Q9Y5U2	329 aa	Predicted RBP	6.28	□□□□□ -1.4
EFNA1-205	ENST00000497282	TEX22	C9J3V5	150 aa		6.27	□□□□□ -1.41
EFNA1-205	ENST00000497282		H0Y980	276 aa		6.27	□□□□□ -1.41
EFNA1-205	ENST00000497282		M0QZ24	198 aa		6.27	□□□□□ -1.41
EFNA1-205	ENST00000497282	UPK2	O00526	184 aa		6.27	□□□□□ -1.41
EFNA1-205	ENST00000497282	CNIH1	O95406	144 aa		6.27	□□□□□ -1.41
EFNA1-205	ENST00000497282	KRAS	P01116	189 aa		6.27	□□□□□ -1.41
EFNA1-205	ENST00000497282	OPN1MW	P04001	364 aa		6.27	□□□□□ -1.41
EFNA1-205	ENST00000497282	ELANE	P08246	267 aa		6.27	□□□□□ -1.41
EFNA1-205	ENST00000497282	OR9G9	P0C7N8	305 aa		6.27	□□□□□ -1.41
EFNA1-205	ENST00000497282	OPN1MW2	P0DN77	364 aa		6.27	□□□□□ -1.41
EFNA1-205	ENST00000497282	OPN1MW3	P0DN78	364 aa		6.27	□□□□□ -1.41
EFNA1-205	ENST00000497282	S100G	P29377	79 aa		6.27	□□□□□ -1.41
EFNA1-205	ENST00000497282	BTC	P35070	178 aa		6.27	□□□□□ -1.41
EFNA1-205	ENST00000497282	FAU	P35544	74 aa	Known RBP	6.27	□□□□□ -1.41
EFNA1-205	ENST00000497282	G6PC	P35575	357 aa		6.27	□□□□□ -1.41
EFNA1-205	ENST00000497282	ECI1	P42126	302 aa		6.27	□□□□□ -1.41
EFNA1-205	ENST00000497282	AP3S2	P59780	193 aa		6.27	□□□□□ -1.41
EFNA1-205	ENST00000497282	RPL23A	P62750	156 aa	Known RBP	6.27	□□□□□ -1.41
EFNA1-205	ENST00000497282	KIAA0141	Q14154	515 aa	Predicted RBP	6.27	□□□□□ -1.41
EFNA1-205	ENST00000497282	SP6	Q3SY56	376 aa		6.27	□□□□□ -1.41
EFNA1-205	ENST00000497282	AKIRIN2	Q53H80	203 aa		6.27	□□□□□ -1.41
EFNA1-205	ENST00000497282	TRIQK	Q629K1	86 aa		6.27	□□□□□ -1.41
EFNA1-205	ENST00000497282	ETV3L	Q6ZN32	361 aa		6.27	□□□□□ -1.41
EFNA1-205	ENST00000497282	COMMD1	Q8N668	190 aa		6.27	□□□□□ -1.41
EFNA1-205	ENST00000497282	TCTEX1D1	Q8N7M0	179 aa		6.27	□□□□□ -1.41
EFNA1-205	ENST00000497282	ADAD2	Q8NCV1	583 aa	Known RBP	6.27	□□□□□ -1.41
EFNA1-205	ENST00000497282	VSTM2A	Q8TAG5	236 aa		6.27	□□□□□ -1.41
EFNA1-205	ENST00000497282	ZFAND1	Q8TCF1	268 aa		6.27	□□□□□ -1.41
EFNA1-205	ENST00000497282	SEC22A	Q96IW7	307 aa		6.27	□□□□□ -1.41
EFNA1-205	ENST00000497282	GON7	Q9BXV9	100 aa		6.27	□□□□□ -1.41
EFNA1-205	ENST00000497282	FAM212B	Q9NTI7	297 aa	Predicted RBP	6.27	□□□□□ -1.41
EFNA1-205	ENST00000497282	COPZ2	Q9P299	210 aa		6.27	□□□□□ -1.41
EFNA1-205	ENST00000497282	SCP2D1	Q9UJQ7	156 aa		6.27	□□□□□ -1.41
EFNA1-205	ENST00000497282	C14orf166	Q9Y224	244 aa	Known RBP	6.27	□□□□□ -1.41
EFNA1-205	ENST00000497282	FOXA2	Q9Y261	457 aa	Predicted RBP	6.27	□□□□□ -1.41
EFNA1-205	ENST00000497282	ANK2	Q01484	3957 aa		6.26	□□□□□ -1.41
EFNA1-205	ENST00000497282		A0A0G2JRQ6	117 aa		6.26	□□□□□ -1.41
EFNA1-205	ENST00000497282	C3orf85	A0A1B0GTC6	90 aa		6.26	□□□□□ -1.41
EFNA1-205	ENST00000497282	LINC00854	A0A1B0GVQ3	168 aa		6.26	□□□□□ -1.41
EFNA1-205	ENST00000497282	HMX3	A6NHT5	357 aa		6.26	□□□□□ -1.41
EFNA1-205	ENST00000497282	MSGN1	A6NI15	193 aa		6.26	□□□□□ -1.41
EFNA1-205	ENST00000497282	CRYM-AS1	A6NIL9	109 aa		6.26	□□□□□ -1.41
EFNA1-205	ENST00000497282	DBX1	A6NMT0	343 aa		6.26	□□□□□ -1.41
EFNA1-205	ENST00000497282	CREBL2	O60519	120 aa	Predicted RBP	6.26	□□□□□ -1.41
EFNA1-205	ENST00000497282	RBMXL2	O75526	392 aa	Known RBP	6.26	□□□□□ -1.41
EFNA1-205	ENST00000497282	IGKV1-5	P01602	117 aa		6.26	□□□□□ -1.41
EFNA1-205	ENST00000497282	OR5AC1	P0C628	307 aa		6.26	□□□□□ -1.41
EFNA1-205	ENST00000497282	PF4V1	P10720	104 aa		6.26	□□□□□ -1.41
EFNA1-205	ENST00000497282	UCP1	P25874	307 aa		6.26	□□□□□ -1.41
EFNA1-205	ENST00000497282	RPL27A	P46776	148 aa	Known RBP	6.26	□□□□□ -1.41
EFNA1-205	ENST00000497282	CCR6	P51684	374 aa		6.26	□□□□□ -1.41
EFNA1-205	ENST00000497282	OR2B8P	P59922	312 aa		6.26	□□□□□ -1.41
EFNA1-205	ENST00000497282	RPL8	P62917	257 aa	Known RBP	6.26	□□□□□ -1.41
EFNA1-205	ENST00000497282	SUPT4H1	P63272	117 aa	Known RBP	6.26	□□□□□ -1.41
EFNA1-205	ENST00000497282	DEFA5	Q01523	94 aa		6.26	□□□□□ -1.41
EFNA1-205	ENST00000497282	IZUMO4	Q1ZYL8	232 aa		6.26	□□□□□ -1.41
EFNA1-205	ENST00000497282	DEFB136	Q30KP8	78 aa		6.26	□□□□□ -1.41
EFNA1-205	ENST00000497282	CXorf66	Q5JRM2	361 aa	Predicted RBP	6.26	□□□□□ -1.41
EFNA1-205	ENST00000497282	TREML4	Q6UXN2	200 aa		6.26	□□□□□ -1.41
EFNA1-205	ENST00000497282	C19orf35	Q6ZS72	473 aa		6.26	□□□□□ -1.41
EFNA1-205	ENST00000497282	LINC00299	Q6ZSB3	139 aa		6.26	□□□□□ -1.41
EFNA1-205	ENST00000497282	C8orf86	Q6ZUL3	223 aa		6.26	□□□□□ -1.41
EFNA1-205	ENST00000497282	CCDC71L	Q8N9Z2	235 aa		6.26	□□□□□ -1.41
EFNA1-205	ENST00000497282	KLHL30-AS1	Q8NEE0	82 aa		6.26	□□□□□ -1.41
EFNA1-205	ENST00000497282	DMBX1	Q8NFW5	382 aa		6.26	□□□□□ -1.41
EFNA1-205	ENST00000497282	OR4A5	Q8NH83	315 aa		6.26	□□□□□ -1.41
EFNA1-205	ENST00000497282	LHFPL5	Q8TAF8	219 aa		6.26	□□□□□ -1.41
EFNA1-205	ENST00000497282	DEDD2	Q8WXF8	326 aa		6.26	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms