RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 RAP1GDS1P52306 607 aa1.63□□□□□ -2.15
SMC4-225ENST00000497203 NKX2-5P52952 324 aaPredicted RBP1.63□□□□□ -2.15
SMC4-225ENST00000497203 TCL1AP56279 114 aa1.63□□□□□ -2.15
SMC4-225ENST00000497203 RAB5BP61020 215 aa1.63□□□□□ -2.15
SMC4-225ENST00000497203 RPL26P61254 145 aaKnown RBP1.63□□□□□ -2.15
SMC4-225ENST00000497203 HES1Q14469 280 aa1.63□□□□□ -2.15
SMC4-225ENST00000497203 PACRGLQ8N7B6 248 aa1.63□□□□□ -2.15
SMC4-225ENST00000497203 ROPN1LQ96C74 230 aa1.63□□□□□ -2.15
SMC4-225ENST00000497203 TTTY13Q9BZ97 58 aa1.63□□□□□ -2.15
SMC4-225ENST00000497203 GUCA1BQ9UMX6 200 aa1.63□□□□□ -2.15
SMC4-225ENST00000497203 RPL26L1Q9UNX3 145 aaKnown RBP1.63□□□□□ -2.15
SMC4-225ENST00000497203 ANGPT4Q9Y264 503 aa1.63□□□□□ -2.15
SMC4-225ENST00000497203 A0A0J9YW62 118 aa1.62□□□□□ -2.15
SMC4-225ENST00000497203 EVPLLA8MZ36 301 aa1.62□□□□□ -2.15
SMC4-225ENST00000497203 CREBL2O60519 120 aaPredicted RBP1.62□□□□□ -2.15
SMC4-225ENST00000497203 MAP2K4P45985 399 aa1.62□□□□□ -2.15
SMC4-225ENST00000497203 HAAOP46952 286 aa1.62□□□□□ -2.15
SMC4-225ENST00000497203 REG1BP48304 166 aa1.62□□□□□ -2.15
SMC4-225ENST00000497203 RPL30P62888 115 aaKnown RBP1.62□□□□□ -2.15
SMC4-225ENST00000497203 TNFAIP6P98066 277 aaPredicted RBP1.62□□□□□ -2.15
SMC4-225ENST00000497203 GLO1Q04760 184 aa1.62□□□□□ -2.15
SMC4-225ENST00000497203 HIST3H3Q16695 136 aa1.62□□□□□ -2.15
SMC4-225ENST00000497203 PCOTHQ58A44 107 aa1.62□□□□□ -2.15
SMC4-225ENST00000497203 LYZL1Q6UWQ5 148 aa1.62□□□□□ -2.15
SMC4-225ENST00000497203 TBC1D19Q8N5T2 526 aa1.62□□□□□ -2.15
SMC4-225ENST00000497203 DEFB125Q8N687 156 aa1.62□□□□□ -2.15
SMC4-225ENST00000497203 SGMS2Q8NHU3 365 aa1.62□□□□□ -2.15
SMC4-225ENST00000497203 SLC7A6Q92536 515 aa1.62□□□□□ -2.15
SMC4-225ENST00000497203 OR51I1Q9H343 314 aa1.62□□□□□ -2.15
SMC4-225ENST00000497203 RSL24D1Q9UHA3 163 aaKnown RBP1.62□□□□□ -2.15
SMC4-225ENST00000497203 COQ4Q9Y3A0 265 aa1.62□□□□□ -2.15
SMC4-225ENST00000497203 REREQ9P2R6 1566 aa1.62□□□□□ -2.15
SMC4-225ENST00000497203 DOCK10Q96BY6 2186 aa1.62□□□□□ -2.15
SMC4-225ENST00000497203 ZNF532Q9HCE3 1301 aa1.62□□□□□ -2.15
SMC4-225ENST00000497203 ADCY9O60503 1353 aa1.61□□□□□ -2.15
SMC4-225ENST00000497203 COL5A3P25940 1745 aaPredicted RBP1.61□□□□□ -2.15
SMC4-225ENST00000497203 VWDEQ8N2E2 1590 aa1.61□□□□□ -2.15
SMC4-225ENST00000497203 OR5G3P0C626 314 aa1.61□□□□□ -2.15
SMC4-225ENST00000497203 KCNE1P15382 129 aa1.61□□□□□ -2.15
SMC4-225ENST00000497203 PEBP1P30086 187 aaKnown RBP1.61□□□□□ -2.15
SMC4-225ENST00000497203 CCR2P41597 374 aa1.61□□□□□ -2.15
SMC4-225ENST00000497203 KRTAP12-1P59990 96 aa1.61□□□□□ -2.15
SMC4-225ENST00000497203 TPI1P60174 286 aa1.61□□□□□ -2.15
SMC4-225ENST00000497203 TMEM258P61165 79 aa1.61□□□□□ -2.15
SMC4-225ENST00000497203 TNFAIP8L3Q5GJ75 292 aa1.61□□□□□ -2.15
SMC4-225ENST00000497203 XPNPEP1Q9NQW7 623 aa1.61□□□□□ -2.15
SMC4-225ENST00000497203 TIMM9Q9Y5J7 89 aa1.61□□□□□ -2.15
SMC4-225ENST00000497203 GBF1Q92538 1859 aa1.6□□□□□ -2.15
SMC4-225ENST00000497203 DCCP43146 1447 aa1.6□□□□□ -2.15
SMC4-225ENST00000497203 TMSB15BA0A087X1C1 80 aa1.6□□□□□ -2.15
SMC4-225ENST00000497203 TMEM269A0A1B0GVZ9 245 aa1.6□□□□□ -2.15
SMC4-225ENST00000497203 RFPL4AA6NLU0 287 aa1.6□□□□□ -2.15
SMC4-225ENST00000497203 RFPL4AL1F8VTS6 287 aa1.6□□□□□ -2.15
SMC4-225ENST00000497203 LST1O00453 97 aa1.6□□□□□ -2.15
SMC4-225ENST00000497203 PLA2G10O15496 165 aa1.6□□□□□ -2.15
SMC4-225ENST00000497203 HIST1H1EP10412 219 aaKnown RBP1.6□□□□□ -2.15
SMC4-225ENST00000497203 RAB13P51153 203 aa1.6□□□□□ -2.15
SMC4-225ENST00000497203 IDH3GP51553 393 aaPredicted RBP1.6□□□□□ -2.15
SMC4-225ENST00000497203 HIST1H4AP62805 103 aaKnown RBP1.6□□□□□ -2.15
SMC4-225ENST00000497203 IMPG1Q17R60 797 aa1.6□□□□□ -2.15
SMC4-225ENST00000497203 ACSM3Q53FZ2 586 aa1.6□□□□□ -2.15
SMC4-225ENST00000497203 GLT8D1Q68CQ7 371 aa1.6□□□□□ -2.15
SMC4-225ENST00000497203 SFXN4Q6P4A7 337 aa1.6□□□□□ -2.15
SMC4-225ENST00000497203 ZNF705AQ6ZN79 300 aaPredicted RBP1.6□□□□□ -2.15
SMC4-225ENST00000497203 SSX8Q7RTT4 187 aa1.6□□□□□ -2.15
SMC4-225ENST00000497203 OR51T1Q8NGJ9 327 aa1.6□□□□□ -2.15
SMC4-225ENST00000497203 DOHHQ9BU89 302 aa1.6□□□□□ -2.15
SMC4-225ENST00000497203 TIMM21Q9BVV7 248 aa1.6□□□□□ -2.15
SMC4-225ENST00000497203 PXDNLA1KZ92 1463 aa1.6□□□□□ -2.15
SMC4-225ENST00000497203 PTPRSQ13332 1948 aa1.6□□□□□ -2.15
SMC4-225ENST00000497203 ITGB4P16144 1822 aa1.59□□□□□ -2.15
SMC4-225ENST00000497203 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.59□□□□□ -2.15
SMC4-225ENST00000497203 A8MUN3 132 aa1.59□□□□□ -2.15
SMC4-225ENST00000497203 TNNC2P02585 160 aa1.59□□□□□ -2.15
SMC4-225ENST00000497203 SRP19P09132 144 aaKnown RBP1.59□□□□□ -2.15
SMC4-225ENST00000497203 CSN1S1P47710 185 aa1.59□□□□□ -2.15
SMC4-225ENST00000497203 CEBPGP53567 150 aa1.59□□□□□ -2.15
SMC4-225ENST00000497203 TPRXLQ17RH7 258 aa1.59□□□□□ -2.15
SMC4-225ENST00000497203 KRTAP13-4Q3LI77 160 aa1.59□□□□□ -2.15
SMC4-225ENST00000497203 FAM201AQ5SY85 155 aa1.59□□□□□ -2.15
SMC4-225ENST00000497203 C9orf64Q5T6V5 341 aa1.59□□□□□ -2.15
SMC4-225ENST00000497203 HIST2H3PS2Q5TEC6 136 aa1.59□□□□□ -2.15
SMC4-225ENST00000497203 OR8B12Q8NGG6 310 aa1.59□□□□□ -2.15
SMC4-225ENST00000497203 OR1L8Q8NGR8 309 aa1.59□□□□□ -2.15
SMC4-225ENST00000497203 IMP4Q96G21 291 aaKnown RBP1.59□□□□□ -2.15
SMC4-225ENST00000497203 CNBD2Q96M20 576 aa1.59□□□□□ -2.15
SMC4-225ENST00000497203 IMMP2LQ96T52 175 aa1.59□□□□□ -2.15
SMC4-225ENST00000497203 COL11A1P12107 1806 aaPredicted RBP1.59□□□□□ -2.16
SMC4-225ENST00000497203 DENND4BO75064 1496 aaPredicted RBP1.58□□□□□ -2.16
SMC4-225ENST00000497203 SNAPC4Q5SXM2 1469 aa1.58□□□□□ -2.16
SMC4-225ENST00000497203 PTPRBP23467 1997 aa1.58□□□□□ -2.16
SMC4-225ENST00000497203 ZNF860A6NHJ4 632 aa1.58□□□□□ -2.16
SMC4-225ENST00000497203 SIGLEC16A6NMB1 481 aa1.58□□□□□ -2.16
SMC4-225ENST00000497203 GOLGA6L19H0YKK7 550 aa1.58□□□□□ -2.16
SMC4-225ENST00000497203 NSA2O95478 260 aaKnown RBP1.58□□□□□ -2.16
SMC4-225ENST00000497203 GPX1P07203 203 aa1.58□□□□□ -2.16
SMC4-225ENST00000497203 ZNF705DP0CH99 300 aaPredicted RBP1.58□□□□□ -2.16
SMC4-225ENST00000497203 S100A7P31151 101 aa1.58□□□□□ -2.16
SMC4-225ENST00000497203 SULT1A1P50225 295 aa1.58□□□□□ -2.16
SMC4-225ENST00000497203 OR4D2P58180 307 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms