RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 MUC21A0A0G2JKD1 596 aa10.84□□□□□ -0.67
VEGFA-215ENST00000497139 MUC21A0A140T8X8 626 aa10.84□□□□□ -0.67
VEGFA-215ENST00000497139 C15orf62A8K5M9 175 aa10.84□□□□□ -0.67
VEGFA-215ENST00000497139 G3V3Y1 287 aa10.84□□□□□ -0.67
VEGFA-215ENST00000497139 TNXAQ16473 311 aa10.84□□□□□ -0.67
VEGFA-215ENST00000497139 TIGITQ495A1 244 aa10.84□□□□□ -0.67
VEGFA-215ENST00000497139 PDLIM3Q53GG5 364 aaPredicted RBP10.84□□□□□ -0.67
VEGFA-215ENST00000497139 MUC21Q5SSG8 566 aa10.84□□□□□ -0.67
VEGFA-215ENST00000497139 COLCA1Q6ZS62 124 aa10.84□□□□□ -0.67
VEGFA-215ENST00000497139 ZNF645Q8N7E2 425 aa10.84□□□□□ -0.67
VEGFA-215ENST00000497139 TMEM45BQ96B21 275 aa10.84□□□□□ -0.67
VEGFA-215ENST00000497139 HS3ST6Q96QI5 342 aa10.84□□□□□ -0.67
VEGFA-215ENST00000497139 MS4A6AQ9H2W1 248 aa10.84□□□□□ -0.67
VEGFA-215ENST00000497139 GP6Q9HCN6 339 aa10.84□□□□□ -0.67
VEGFA-215ENST00000497139 HELTA6NFD8 242 aa10.84□□□□□ -0.67
VEGFA-215ENST00000497139 OR4C46A6NHA9 309 aa10.84□□□□□ -0.67
VEGFA-215ENST00000497139 USF1P22415 310 aaPredicted RBP10.84□□□□□ -0.67
VEGFA-215ENST00000497139 SEC11AP67812 179 aa10.84□□□□□ -0.67
VEGFA-215ENST00000497139 CENPWQ5EE01 88 aa10.84□□□□□ -0.67
VEGFA-215ENST00000497139 PARM1Q6UWI2 310 aa10.84□□□□□ -0.67
VEGFA-215ENST00000497139 ZNF837Q96EG3 531 aaPredicted RBP10.84□□□□□ -0.67
VEGFA-215ENST00000497139 PMCHL2Q9BQD1 86 aa10.84□□□□□ -0.67
VEGFA-215ENST00000497139 CHD9Q3L8U1 2897 aa10.83□□□□□ -0.68
VEGFA-215ENST00000497139 RRHO14718 337 aa10.83□□□□□ -0.68
VEGFA-215ENST00000497139 OR2J3O76001 311 aa10.83□□□□□ -0.68
VEGFA-215ENST00000497139 IGHV4-34P06331 123 aa10.83□□□□□ -0.68
VEGFA-215ENST00000497139 G6PCP35575 357 aa10.83□□□□□ -0.68
VEGFA-215ENST00000497139 GPM6AP51674 278 aa10.83□□□□□ -0.68
VEGFA-215ENST00000497139 PSG3Q16557 428 aa10.83□□□□□ -0.68
VEGFA-215ENST00000497139 SPATA46Q5T0L3 261 aa10.83□□□□□ -0.68
VEGFA-215ENST00000497139 UFSP1Q6NVU6 142 aa10.83□□□□□ -0.68
VEGFA-215ENST00000497139 DLL3Q9NYJ7 618 aa10.83□□□□□ -0.68
VEGFA-215ENST00000497139 IL36RNQ9UBH0 155 aa10.83□□□□□ -0.68
VEGFA-215ENST00000497139 SMIM17P0DL12 118 aa10.83□□□□□ -0.68
VEGFA-215ENST00000497139 GGTLC1Q9BX51 225 aa10.83□□□□□ -0.68
VEGFA-215ENST00000497139 IGFLR1Q9H665 355 aa10.83□□□□□ -0.68
VEGFA-215ENST00000497139 SH3BGRL2Q9UJC5 107 aa10.83□□□□□ -0.68
VEGFA-215ENST00000497139 ARHGAP21Q5T5U3 1957 aa10.83□□□□□ -0.68
VEGFA-215ENST00000497139 IGLV3-12A0A075B6K2 115 aa10.82□□□□□ -0.68
VEGFA-215ENST00000497139 PRSS47A8MTI9 375 aa10.82□□□□□ -0.68
VEGFA-215ENST00000497139 ZFAND5O76080 213 aa10.82□□□□□ -0.68
VEGFA-215ENST00000497139 RIPPLY3P57055 190 aa10.82□□□□□ -0.68
VEGFA-215ENST00000497139 PRSS57Q6UWY2 283 aa10.82□□□□□ -0.68
VEGFA-215ENST00000497139 C17orf82Q86X59 251 aaPredicted RBP10.82□□□□□ -0.68
VEGFA-215ENST00000497139 ZDHHC16Q969W1 377 aa10.82□□□□□ -0.68
VEGFA-215ENST00000497139 FGF23Q9GZV9 251 aaPredicted RBP10.82□□□□□ -0.68
VEGFA-215ENST00000497139 TNFRSF19Q9NS68 423 aa10.82□□□□□ -0.68
VEGFA-215ENST00000497139 SLC25A10Q9UBX3 287 aaPredicted RBP10.82□□□□□ -0.68
VEGFA-215ENST00000497139 OR51B2Q9Y5P1 312 aa10.82□□□□□ -0.68
VEGFA-215ENST00000497139 TNRC6AQ8NDV7 1962 aaKnown RBP10.82□□□□□ -0.68
VEGFA-215ENST00000497139 GAGE10A6NGK3 116 aa10.82□□□□□ -0.68
VEGFA-215ENST00000497139 SSTR5P35346 364 aa10.82□□□□□ -0.68
VEGFA-215ENST00000497139 CA7P43166 264 aa10.82□□□□□ -0.68
VEGFA-215ENST00000497139 EIF4EBP1Q13541 118 aaPredicted RBP10.82□□□□□ -0.68
VEGFA-215ENST00000497139 TREML4Q6UXN2 200 aa10.82□□□□□ -0.68
VEGFA-215ENST00000497139 H2BFWTQ7Z2G1 175 aa10.82□□□□□ -0.68
VEGFA-215ENST00000497139 SPACA3Q8IXA5 215 aa10.82□□□□□ -0.68
VEGFA-215ENST00000497139 SPACA9Q96E40 222 aaPredicted RBP10.82□□□□□ -0.68
VEGFA-215ENST00000497139 TAAR6Q96RI8 345 aa10.82□□□□□ -0.68
VEGFA-215ENST00000497139 RPP25Q9BUL9 199 aaKnown RBP10.82□□□□□ -0.68
VEGFA-215ENST00000497139 TMEM191AQ9H0A3 160 aa10.82□□□□□ -0.68
VEGFA-215ENST00000497139 TRAV8-6A0A0B4J262 113 aa10.81□□□□□ -0.68
VEGFA-215ENST00000497139 GJE1A6NN92 205 aa10.81□□□□□ -0.68
VEGFA-215ENST00000497139 FAM90A9PA6NNJ1 464 aa10.81□□□□□ -0.68
VEGFA-215ENST00000497139 CELA3BP08861 270 aa10.81□□□□□ -0.68
VEGFA-215ENST00000497139 IBA57Q5T440 356 aaKnown RBP10.81□□□□□ -0.68
VEGFA-215ENST00000497139 ZNF497Q6ZNH5 498 aa10.81□□□□□ -0.68
VEGFA-215ENST00000497139 OR2Y1Q8NGV0 311 aa10.81□□□□□ -0.68
VEGFA-215ENST00000497139 UCN2Q96RP3 112 aa10.81□□□□□ -0.68
VEGFA-215ENST00000497139 SCRT2Q9NQ03 307 aa10.81□□□□□ -0.68
VEGFA-215ENST00000497139 TMEM167BQ9NRX6 74 aa10.81□□□□□ -0.68
VEGFA-215ENST00000497139 DKK1O94907 266 aa10.81□□□□□ -0.68
VEGFA-215ENST00000497139 ARF1P84077 181 aaKnown RBP10.81□□□□□ -0.68
VEGFA-215ENST00000497139 TFF2Q03403 129 aa10.81□□□□□ -0.68
VEGFA-215ENST00000497139 SLAQ13239 276 aa10.81□□□□□ -0.68
VEGFA-215ENST00000497139 NRN1LQ496H8 165 aa10.81□□□□□ -0.68
VEGFA-215ENST00000497139 MGST2Q99735 147 aa10.81□□□□□ -0.68
VEGFA-215ENST00000497139 FOXB1Q99853 325 aa10.81□□□□□ -0.68
VEGFA-215ENST00000497139 MBNL3Q9NUK0 354 aaKnown RBP10.81□□□□□ -0.68
VEGFA-215ENST00000497139 SMPXQ9UHP9 88 aa10.81□□□□□ -0.68
VEGFA-215ENST00000497139 IGHV3-15A0A0B4J1V0 119 aa10.8□□□□□ -0.68
VEGFA-215ENST00000497139 NEURL1O76050 574 aa10.8□□□□□ -0.68
VEGFA-215ENST00000497139 B4GALT1P15291 398 aa10.8□□□□□ -0.68
VEGFA-215ENST00000497139 MRPL49Q13405 166 aaKnown RBP10.8□□□□□ -0.68
VEGFA-215ENST00000497139 ERASQ7Z444 233 aa10.8□□□□□ -0.68
VEGFA-215ENST00000497139 PKIBQ9C010 78 aa10.8□□□□□ -0.68
VEGFA-215ENST00000497139 TECRQ9NZ01 308 aaKnown RBP10.8□□□□□ -0.68
VEGFA-215ENST00000497139 ZIC3O60481 467 aa10.8□□□□□ -0.68
VEGFA-215ENST00000497139 SAP30O75446 220 aa10.8□□□□□ -0.68
VEGFA-215ENST00000497139 GPR6P46095 362 aaPredicted RBP10.8□□□□□ -0.68
VEGFA-215ENST00000497139 RTL8BQ17RB0 113 aa10.8□□□□□ -0.68
VEGFA-215ENST00000497139 SAMD13Q5VXD3 122 aa10.8□□□□□ -0.68
VEGFA-215ENST00000497139 PQLC2Q6ZP29 291 aa10.8□□□□□ -0.68
VEGFA-215ENST00000497139 NEGR1Q7Z3B1 354 aa10.8□□□□□ -0.68
VEGFA-215ENST00000497139 OR1B1Q8NGR6 318 aa10.8□□□□□ -0.68
VEGFA-215ENST00000497139 CHCHD1Q96BP2 118 aaKnown RBP10.8□□□□□ -0.68
VEGFA-215ENST00000497139 OR2V2Q96R30 315 aa10.8□□□□□ -0.68
VEGFA-215ENST00000497139 LINC01565O15544 149 aa10.79□□□□□ -0.68
VEGFA-215ENST00000497139 SPINK4O60575 86 aa10.79□□□□□ -0.68
VEGFA-215ENST00000497139 MRPS21P82921 87 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms