RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 DOCK5Q9H7D0 1870 aa2.9□□□□□ -1.95
SNX13-211ENST00000496855 ARHGAP21Q5T5U3 1957 aa2.9□□□□□ -1.95
SNX13-211ENST00000496855 KIF21BO75037 1637 aa2.9□□□□□ -1.95
SNX13-211ENST00000496855 IGHV3-21A0A0B4J1V1 117 aa2.9□□□□□ -1.95
SNX13-211ENST00000496855 CLDN25C9JDP6 229 aa2.9□□□□□ -1.95
SNX13-211ENST00000496855 RBFOX2O43251 390 aaKnown RBP eCLIP2.9□□□□□ -1.956e-8■■■□□ 15.7
SNX13-211ENST00000496855 GSTZ1O43708 216 aaPredicted RBP2.9□□□□□ -1.95
SNX13-211ENST00000496855 CRYZL1O95825 349 aa2.9□□□□□ -1.95
SNX13-211ENST00000496855 TRGV3P03979 118 aa2.9□□□□□ -1.95
SNX13-211ENST00000496855 IFI30P13284 250 aa2.9□□□□□ -1.95
SNX13-211ENST00000496855 NPY1RP25929 384 aa2.9□□□□□ -1.95
SNX13-211ENST00000496855 ZNF140P52738 457 aaPredicted RBP2.9□□□□□ -1.95
SNX13-211ENST00000496855 TPI1P60174 286 aa2.9□□□□□ -1.95
SNX13-211ENST00000496855 AKR1C8PQ5T2L2 129 aa2.9□□□□□ -1.95
SNX13-211ENST00000496855 IBA57Q5T440 356 aaKnown RBP2.9□□□□□ -1.95
SNX13-211ENST00000496855 LCE1CQ5T751 118 aa2.9□□□□□ -1.95
SNX13-211ENST00000496855 LCE1BQ5T7P3 118 aa2.9□□□□□ -1.95
SNX13-211ENST00000496855 WDR59Q6PJI9 974 aa2.9□□□□□ -1.95
SNX13-211ENST00000496855 PP632Q6XCG6 107 aa2.9□□□□□ -1.95
SNX13-211ENST00000496855 SLC22A24Q8N4F4 322 aa2.9□□□□□ -1.95
SNX13-211ENST00000496855 ZNF439Q8NDP4 499 aa2.9□□□□□ -1.95
SNX13-211ENST00000496855 OR10G2Q8NGC3 310 aa2.9□□□□□ -1.95
SNX13-211ENST00000496855 RTN4IP1Q8WWV3 396 aaPredicted RBP2.9□□□□□ -1.95
SNX13-211ENST00000496855 TBL1YQ9BQ87 522 aa2.9□□□□□ -1.95
SNX13-211ENST00000496855 RSPO3Q9BXY4 272 aaPredicted RBP2.9□□□□□ -1.95
SNX13-211ENST00000496855 PLA2G2FQ9BZM2 168 aa2.9□□□□□ -1.95
SNX13-211ENST00000496855 GPR84Q9NQS5 396 aa2.9□□□□□ -1.95
SNX13-211ENST00000496855 ACER3Q9NUN7 267 aa2.9□□□□□ -1.95
SNX13-211ENST00000496855 FBXL12Q9NXK8 326 aa2.9□□□□□ -1.95
SNX13-211ENST00000496855 GSKIPQ9P0R6 139 aa2.9□□□□□ -1.95
SNX13-211ENST00000496855 TMEM14AQ9Y6G1 99 aa2.9□□□□□ -1.95
SNX13-211ENST00000496855 DSCAML1Q8TD84 2053 aa2.89□□□□□ -1.95
SNX13-211ENST00000496855 KIAA1671Q9BY89 1806 aa2.89□□□□□ -1.95
SNX13-211ENST00000496855 MYH2Q9UKX2 1941 aa2.89□□□□□ -1.95
SNX13-211ENST00000496855 SCN10AQ9Y5Y9 1956 aa2.89□□□□□ -1.95
SNX13-211ENST00000496855 SCRIBQ14160 1630 aa2.89□□□□□ -1.95
SNX13-211ENST00000496855 ADAMTSL1Q8N6G6 1762 aa2.89□□□□□ -1.95
SNX13-211ENST00000496855 G3V2T6 193 aa2.89□□□□□ -1.95
SNX13-211ENST00000496855 PLA2G10O15496 165 aa2.89□□□□□ -1.95
SNX13-211ENST00000496855 PDYNP01213 254 aa2.89□□□□□ -1.95
SNX13-211ENST00000496855 IGKV1D-33P01593 117 aa2.89□□□□□ -1.95
SNX13-211ENST00000496855 IGKV1-33P01594 117 aa2.89□□□□□ -1.95
SNX13-211ENST00000496855 C8GP07360 202 aa2.89□□□□□ -1.95
SNX13-211ENST00000496855 ADRA2AP08913 450 aa2.89□□□□□ -1.95
SNX13-211ENST00000496855 CRYBB3P26998 211 aa2.89□□□□□ -1.95
SNX13-211ENST00000496855 ERP29P30040 261 aaKnown RBP2.89□□□□□ -1.95
SNX13-211ENST00000496855 ATP5G3P48201 142 aa2.89□□□□□ -1.95
SNX13-211ENST00000496855 LTC4SQ16873 150 aa2.89□□□□□ -1.95
SNX13-211ENST00000496855 DEFB116Q30KQ4 102 aa2.89□□□□□ -1.95
SNX13-211ENST00000496855 CCDC153Q494R4 210 aa2.89□□□□□ -1.95
SNX13-211ENST00000496855 AMN1Q8IY45 258 aa2.89□□□□□ -1.95
SNX13-211ENST00000496855 MIR7-3HGQ8N6C7 128 aa2.89□□□□□ -1.95
SNX13-211ENST00000496855 FER1L6-AS1Q8NA97 138 aa2.89□□□□□ -1.95
SNX13-211ENST00000496855 OR5J2Q8NH18 312 aa2.89□□□□□ -1.95
SNX13-211ENST00000496855 C12orf43Q96C57 262 aaKnown RBP2.89□□□□□ -1.95
SNX13-211ENST00000496855 ROPN1LQ96C74 230 aa2.89□□□□□ -1.95
SNX13-211ENST00000496855 LYSMD1Q96S90 227 aa2.89□□□□□ -1.95
SNX13-211ENST00000496855 C1QTNF6Q9BXI9 259 aa2.89□□□□□ -1.95
SNX13-211ENST00000496855 FAM96AQ9H5X1 160 aa2.89□□□□□ -1.95
SNX13-211ENST00000496855 KCNIP2Q9NS61 270 aa2.89□□□□□ -1.95
SNX13-211ENST00000496855 JPT1Q9UK76 154 aa2.89□□□□□ -1.95
SNX13-211ENST00000496855 OR52A1Q9UKL2 312 aa2.89□□□□□ -1.95
SNX13-211ENST00000496855 LINC00588Q9Y4M8 146 aa2.89□□□□□ -1.95
SNX13-211ENST00000496855 HSPB11Q9Y547 144 aa2.89□□□□□ -1.95
SNX13-211ENST00000496855 CRB1P82279 1406 aa2.88□□□□□ -1.95
SNX13-211ENST00000496855 NCAPD3P42695 1498 aa2.88□□□□□ -1.95
SNX13-211ENST00000496855 RAPGEF6Q8TEU7 1601 aa2.88□□□□□ -1.95
SNX13-211ENST00000496855 CACNA1AO00555 2505 aa2.88□□□□□ -1.95
SNX13-211ENST00000496855 NUP205Q92621 2012 aa2.88□□□□□ -1.95
SNX13-211ENST00000496855 IGKV2D-24A0A075B6R9 120 aa2.88□□□□□ -1.95
SNX13-211ENST00000496855 TRAV4A0A0B4J268 109 aa2.88□□□□□ -1.95
SNX13-211ENST00000496855 LINC00862A6NCI5 91 aa2.88□□□□□ -1.95
SNX13-211ENST00000496855 ZNF324O75467 553 aaPredicted RBP2.88□□□□□ -1.95
SNX13-211ENST00000496855 C1GALT1C1LP0DN25 315 aa2.88□□□□□ -1.95
SNX13-211ENST00000496855 BAMBIQ13145 260 aa2.88□□□□□ -1.95
SNX13-211ENST00000496855 DEFB115Q30KQ5 88 aa2.88□□□□□ -1.95
SNX13-211ENST00000496855 LGALS9BQ3B8N2 356 aa2.88□□□□□ -1.95
SNX13-211ENST00000496855 LGALS9CQ6DKI2 356 aa2.88□□□□□ -1.95
SNX13-211ENST00000496855 Q6ZS49 121 aa2.88□□□□□ -1.95
SNX13-211ENST00000496855 ZFAND2AQ8N6M9 145 aa2.88□□□□□ -1.95
SNX13-211ENST00000496855 CYB561D1Q8N8Q1 229 aa2.88□□□□□ -1.95
SNX13-211ENST00000496855 SLC25A40Q8TBP6 338 aa2.88□□□□□ -1.95
SNX13-211ENST00000496855 GPR146Q96CH1 333 aa2.88□□□□□ -1.95
SNX13-211ENST00000496855 PYURFQ96I23 114 aa2.88□□□□□ -1.95
SNX13-211ENST00000496855 NMNAT3Q96T66 252 aa2.88□□□□□ -1.95
SNX13-211ENST00000496855 AIF1LQ9BQI0 150 aa2.88□□□□□ -1.95
SNX13-211ENST00000496855 EFCAB11Q9BUY7 163 aa2.88□□□□□ -1.95
SNX13-211ENST00000496855 SSR3Q9UNL2 185 aa2.88□□□□□ -1.95
SNX13-211ENST00000496855 RFX7Q2KHR2 1363 aa2.88□□□□□ -1.95
SNX13-211ENST00000496855 PPRC1Q5VV67 1664 aaKnown RBP2.88□□□□□ -1.95
SNX13-211ENST00000496855 CEP152O94986 1710 aa2.88□□□□□ -1.95
SNX13-211ENST00000496855 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.87□□□□□ -1.95
SNX13-211ENST00000496855 A0A087WX48 190 aa2.87□□□□□ -1.95
SNX13-211ENST00000496855 A8MUU9 505 aa2.87□□□□□ -1.95
SNX13-211ENST00000496855 IGLL5B9A064 214 aa2.87□□□□□ -1.95
SNX13-211ENST00000496855 C9JCJ5 164 aa2.87□□□□□ -1.95
SNX13-211ENST00000496855 H7C1C5 153 aa2.87□□□□□ -1.95
SNX13-211ENST00000496855 NDUFA2O43678 99 aa2.87□□□□□ -1.95
SNX13-211ENST00000496855 IGHV1-46P01743 117 aa2.87□□□□□ -1.95
SNX13-211ENST00000496855 CD7P09564 240 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms