RNA–Protein interactions for RNA: ENST00000496838.1

TSC22D1-210, Transcript of TSC22 domain family member 1, humanhuman

TSL 1 (best)

Gene TSC22D1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D1-210ENST00000496838 SCN3AQ9NY46 2000 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 WDFY4Q6ZS81 3184 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 CEP192Q8TEP8 1941 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 IGKV1-27A0A075B6S5 117 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 TRAV8-2A0A0B4J237 113 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 TRAPPC13A5PLN9 417 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 NKX2-6A6NCS4 301 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 J3QRE1 110 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 KPNA4O00629 521 aaPredicted RBP3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 BHLHE40O14503 412 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 GATBO75879 557 aaKnown RBP3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 LY6G6DO95868 133 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 IGLV1-47P01700 117 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 IFNA16P05015 189 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 COX6A1P12074 109 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 IDH2P48735 452 aaKnown RBP3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 CTBP2P56545 445 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 CLDN12P56749 244 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 TAS2R41P59536 307 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 GRB2P62993 217 aaKnown RBP3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 ZNF117Q03924 483 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 SSX1Q16384 188 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 CLEC12BQ2HXU8 276 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 TBC1D28Q2M2D7 210 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 CLEC12AQ5QGZ9 265 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 RASSF6Q6ZTQ3 369 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 KRTAP5-5Q701N2 237 aaPredicted RBP3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 MARCH3Q86UD3 253 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 CLVS1Q8IUQ0 354 aaPredicted RBP3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 PCP2Q8IVA1 136 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 Q8N402 240 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 ZNF555Q8NEP9 628 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 SLC26A10Q8NG04 563 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 GNPDA2Q8TDQ7 276 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 RASSF5Q8WWW0 418 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 C12orf43Q96C57 262 aaKnown RBP3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 DGCR14Q96DF8 476 aaKnown RBP3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 KCTD7Q96MP8 289 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 CHAC1Q9BUX1 264 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 TSSK6Q9BXA6 273 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 PARD6GQ9BYG4 376 aaPredicted RBP3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 SAMD10Q9BYL1 202 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 ARL6Q9H0F7 186 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 IFI27L2Q9H2X8 130 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 PROK2Q9HC23 129 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 TVP23BQ9NYZ1 205 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 FAM32AQ9Y421 112 aaKnown RBP3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 TBL2Q9Y4P3 447 aaKnown RBP3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 INSIG2Q9Y5U4 225 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 TDRD6O60522 2096 aaKnown RBP3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 WDR87Q6ZQQ6 2873 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 THADAQ6YHU6 1953 aa3.29□□□□□ -1.88
TSC22D1-210ENST00000496838 NUP210LQ5VU65 1888 aa3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 COL5A1P20908 1838 aaPredicted RBP3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 PRRC2AP48634 2157 aaKnown RBP3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 TRAV27A0A087WT01 109 aa3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 A0A087WUJ7 227 aa3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 IGHV6-1A0A0B4J1U7 121 aa3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 FAM183AA6NL82 134 aa3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 OR2AT4A6NND4 320 aa3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 F5H768 121 aa3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 M0R036 132 aa3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 RTL8CO15255 209 aa3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 CHP2O43745 196 aa3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 TSPAN19P0C672 248 aa3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 SLC2A1P11166 492 aa3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 PIPP12273 146 aaPredicted RBP3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 IFI30P13284 250 aa3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 SPNP16150 400 aa3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 CBX5P45973 191 aa3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 LGALS7P47929 136 aa3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 SMIM11AP58511 58 aa3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 DCDP81605 110 aaKnown RBP3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 HPCAP84074 193 aa3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 DNM1P34Q6PK57 102 aa3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 ZNF645Q8N7E2 425 aa3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 CLDN22Q8N7P3 220 aa3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 ZNF420Q8TAQ5 688 aaPredicted RBP3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 STOML3Q8TAV4 291 aa3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 PIGXQ8TBF5 258 aa3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 SYNPRQ8TBG9 265 aa3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 C15orf40Q8WUR7 153 aa3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 SLC35B4Q969S0 331 aa3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 SMIM19Q96E16 107 aa3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 TMEM208Q9BTX3 173 aa3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 SUCNR1Q9BXA5 334 aa3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 CDCA4Q9BXL8 241 aa3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 TBL1XR1Q9BZK7 514 aa3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 OR52D1Q9H346 318 aa3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 TRIM45Q9H8W5 580 aaPredicted RBP3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 HMG20AQ9NP66 347 aa3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 RSL24D1Q9UHA3 163 aaKnown RBP3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 PSG11Q9UQ72 335 aa3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 CFAP54Q96N23 3096 aa3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 SDK1Q7Z5N4 2213 aa3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 RP1P56715 2156 aa3.28□□□□□ -1.88
TSC22D1-210ENST00000496838 A0A0C4DFX4 3053 aa3.28□□□□□ -1.89
TSC22D1-210ENST00000496838 NCOR1O75376 2440 aa3.28□□□□□ -1.89
TSC22D1-210ENST00000496838 IGLV3-32A0A0A0MS00 114 aa3.27□□□□□ -1.89
TSC22D1-210ENST00000496838 IGHV1-45A0A0A0MS14 117 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms