RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 OR1N2Q8NGR9 330 aa12.46□□□□□ -0.41
DNMT3A-215ENST00000496570 RSRP1Q9BUV0 290 aa12.46□□□□□ -0.41
DNMT3A-215ENST00000496570 TINAGL1Q9GZM7 467 aaPredicted RBP12.46□□□□□ -0.41
DNMT3A-215ENST00000496570 SLA2Q9H6Q3 261 aa12.46□□□□□ -0.41
DNMT3A-215ENST00000496570 AURKAIP1Q9NWT8 199 aaPredicted RBP12.46□□□□□ -0.41
DNMT3A-215ENST00000496570 SCOCQ9UIL1 159 aa12.46□□□□□ -0.41
DNMT3A-215ENST00000496570 CGB1A6NKQ9 187 aa12.45□□□□□ -0.42
DNMT3A-215ENST00000496570 S1PR2O95136 353 aa12.45□□□□□ -0.42
DNMT3A-215ENST00000496570 HPRT1P00492 218 aa12.45□□□□□ -0.42
DNMT3A-215ENST00000496570 HRASP01112 189 aa12.45□□□□□ -0.42
DNMT3A-215ENST00000496570 IGHV3-11P01762 117 aa12.45□□□□□ -0.42
DNMT3A-215ENST00000496570 TRGV3P03979 118 aa12.45□□□□□ -0.42
DNMT3A-215ENST00000496570 CD74P04233 296 aa12.45□□□□□ -0.42
DNMT3A-215ENST00000496570 CD3DP04234 171 aa12.45□□□□□ -0.42
DNMT3A-215ENST00000496570 MYOD1P15172 320 aa12.45□□□□□ -0.42
DNMT3A-215ENST00000496570 HOXD3P31249 432 aaPredicted RBP12.45□□□□□ -0.42
DNMT3A-215ENST00000496570 DEFA5Q01523 94 aa12.45□□□□□ -0.42
DNMT3A-215ENST00000496570 ZNF616Q08AN1 781 aa12.45□□□□□ -0.42
DNMT3A-215ENST00000496570 ZNF585BQ52M93 769 aa12.45□□□□□ -0.42
DNMT3A-215ENST00000496570 OR4A47Q6IF82 309 aa12.45□□□□□ -0.42
DNMT3A-215ENST00000496570 LHFPL1Q86WI0 220 aa12.45□□□□□ -0.42
DNMT3A-215ENST00000496570 SOSTQ9BQB4 213 aa12.45□□□□□ -0.42
DNMT3A-215ENST00000496570 PLEKHA2Q9HB19 425 aa12.45□□□□□ -0.42
DNMT3A-215ENST00000496570 BET1LQ9NYM9 111 aa12.45□□□□□ -0.42
DNMT3A-215ENST00000496570 IGHV4OR15-8A0A075B7B6 117 aa12.44□□□□□ -0.42
DNMT3A-215ENST00000496570 A0A087WW49 117 aa12.44□□□□□ -0.42
DNMT3A-215ENST00000496570 TRAV3A0A0B4J244 114 aa12.44□□□□□ -0.42
DNMT3A-215ENST00000496570 GABARAPH6UMI1 98 aa12.44□□□□□ -0.42
DNMT3A-215ENST00000496570 GPR31O00270 319 aa12.44□□□□□ -0.42
DNMT3A-215ENST00000496570 UCP3P55916 312 aa12.44□□□□□ -0.42
DNMT3A-215ENST00000496570 RAB25P57735 213 aa12.44□□□□□ -0.42
DNMT3A-215ENST00000496570 TAS2R31P59538 309 aa12.44□□□□□ -0.42
DNMT3A-215ENST00000496570 TSPAN5P62079 268 aa12.44□□□□□ -0.42
DNMT3A-215ENST00000496570 ZNF45Q02386 682 aa12.44□□□□□ -0.42
DNMT3A-215ENST00000496570 VSTM2AQ8TAG5 236 aa12.44□□□□□ -0.42
DNMT3A-215ENST00000496570 FCAMRQ8WWV6 532 aa12.44□□□□□ -0.42
DNMT3A-215ENST00000496570 BORCS5Q969J3 196 aa12.44□□□□□ -0.42
DNMT3A-215ENST00000496570 PHB2Q99623 299 aa12.44□□□□□ -0.42
DNMT3A-215ENST00000496570 HMX3A6NHT5 357 aa12.43□□□□□ -0.42
DNMT3A-215ENST00000496570 CREBL2O60519 120 aaPredicted RBP12.43□□□□□ -0.42
DNMT3A-215ENST00000496570 OR8U8P0C7N1 319 aa12.43□□□□□ -0.42
DNMT3A-215ENST00000496570 OR9G9P0C7N8 305 aa12.43□□□□□ -0.42
DNMT3A-215ENST00000496570 ZNF735P0CB33 412 aa12.43□□□□□ -0.42
DNMT3A-215ENST00000496570 F2RP25116 425 aa12.43□□□□□ -0.42
DNMT3A-215ENST00000496570 PHLDA2Q53GA4 152 aa12.43□□□□□ -0.42
DNMT3A-215ENST00000496570 C19orf35Q6ZS72 473 aa12.43□□□□□ -0.42
DNMT3A-215ENST00000496570 TTC9CQ8N5M4 171 aa12.43□□□□□ -0.42
DNMT3A-215ENST00000496570 TMEM229BQ8NBD8 167 aa12.43□□□□□ -0.42
DNMT3A-215ENST00000496570 CD300LFQ8TDQ1 290 aa12.43□□□□□ -0.42
DNMT3A-215ENST00000496570 C15orf40Q8WUR7 153 aa12.43□□□□□ -0.42
DNMT3A-215ENST00000496570 SMIM4Q8WVI0 70 aa12.43□□□□□ -0.42
DNMT3A-215ENST00000496570 DCUN1D4Q92564 292 aa12.43□□□□□ -0.42
DNMT3A-215ENST00000496570 MRGPRFQ96AM1 343 aa12.43□□□□□ -0.42
DNMT3A-215ENST00000496570 DGCR14Q96DF8 476 aaKnown RBP12.43□□□□□ -0.42
DNMT3A-215ENST00000496570 DIRAS2Q96HU8 199 aa12.43□□□□□ -0.42
DNMT3A-215ENST00000496570 MCRIP2Q9BUT9 160 aaKnown RBP12.43□□□□□ -0.42
DNMT3A-215ENST00000496570 C6orf62Q9GZU0 229 aaPredicted RBP12.43□□□□□ -0.42
DNMT3A-215ENST00000496570 ZNF355PQ9NSJ1 428 aa12.43□□□□□ -0.42
DNMT3A-215ENST00000496570 TRBV9A0A0B4J1U6 114 aa12.42□□□□□ -0.42
DNMT3A-215ENST00000496570 LINC01619G3V211 115 aa12.42□□□□□ -0.42
DNMT3A-215ENST00000496570 UPK2O00526 184 aa12.42□□□□□ -0.42
DNMT3A-215ENST00000496570 CTDSPLO15194 276 aa12.42□□□□□ -0.42
DNMT3A-215ENST00000496570 NOL3O60936 208 aaKnown RBP12.42□□□□□ -0.42
DNMT3A-215ENST00000496570 PRH1P02810 166 aa12.42□□□□□ -0.42
DNMT3A-215ENST00000496570 NQO2P16083 231 aa12.42□□□□□ -0.42
DNMT3A-215ENST00000496570 TBPP20226 339 aa12.42□□□□□ -0.42
DNMT3A-215ENST00000496570 CD40LGP29965 261 aa12.42□□□□□ -0.42
DNMT3A-215ENST00000496570 TNFSF8P32971 234 aa12.42□□□□□ -0.42
DNMT3A-215ENST00000496570 MAS1LP35410 378 aa12.42□□□□□ -0.42
DNMT3A-215ENST00000496570 SLURP1P55000 103 aa12.42□□□□□ -0.42
DNMT3A-215ENST00000496570 RPL8P62917 257 aaKnown RBP12.42□□□□□ -0.42
DNMT3A-215ENST00000496570 RNASE10Q5GAN6 216 aaKnown RBP12.42□□□□□ -0.42
DNMT3A-215ENST00000496570 REC114Q7Z4M0 266 aa12.42□□□□□ -0.42
DNMT3A-215ENST00000496570 CMTM1Q8IZ96 169 aa12.42□□□□□ -0.42
DNMT3A-215ENST00000496570 ARRDC1Q8N5I2 433 aa12.42□□□□□ -0.42
DNMT3A-215ENST00000496570 OR4A5Q8NH83 315 aa12.42□□□□□ -0.42
DNMT3A-215ENST00000496570 DLX4Q92988 240 aaPredicted RBP12.42□□□□□ -0.42
DNMT3A-215ENST00000496570 SPIN2AQ99865 258 aa12.42□□□□□ -0.42
DNMT3A-215ENST00000496570 SPIN2BQ9BPZ2 258 aa12.42□□□□□ -0.42
DNMT3A-215ENST00000496570 TMEM140Q9NV12 185 aa12.42□□□□□ -0.42
DNMT3A-215ENST00000496570 COA4Q9NYJ1 87 aa12.42□□□□□ -0.42
DNMT3A-215ENST00000496570 COMMD9Q9P000 198 aa12.42□□□□□ -0.42
DNMT3A-215ENST00000496570 ACTL6BO94805 426 aa12.41□□□□□ -0.42
DNMT3A-215ENST00000496570 HSPB1P04792 205 aaKnown RBP12.41□□□□□ -0.42
DNMT3A-215ENST00000496570 HLA-GP17693 338 aa12.41□□□□□ -0.42
DNMT3A-215ENST00000496570 LPAR6P43657 344 aa12.41□□□□□ -0.42
DNMT3A-215ENST00000496570 RPL27AP46776 148 aaKnown RBP12.41□□□□□ -0.42
DNMT3A-215ENST00000496570 OR2B8PP59922 312 aa12.41□□□□□ -0.42
DNMT3A-215ENST00000496570 MRPS10P82664 201 aaKnown RBP12.41□□□□□ -0.42
DNMT3A-215ENST00000496570 SSBP1Q04837 148 aaKnown RBP12.41□□□□□ -0.42
DNMT3A-215ENST00000496570 LPCAT3Q6P1A2 487 aa12.41□□□□□ -0.42
DNMT3A-215ENST00000496570 TBC1D26Q86UD7 250 aa12.41□□□□□ -0.42
DNMT3A-215ENST00000496570 SLC38A6Q8IZM9 456 aa12.41□□□□□ -0.42
DNMT3A-215ENST00000496570 SLC2A9Q9NRM0 540 aa12.41□□□□□ -0.42
DNMT3A-215ENST00000496570 MARCH11A6NNE9 402 aa12.4□□□□□ -0.42
DNMT3A-215ENST00000496570 NPIPB5A8MRT5 1133 aa12.4□□□□□ -0.42
DNMT3A-215ENST00000496570 K7EIL1 84 aa12.4□□□□□ -0.42
DNMT3A-215ENST00000496570 IGKV1-39P01597 117 aa12.4□□□□□ -0.42
DNMT3A-215ENST00000496570 TRBV12-3P01733 135 aa12.4□□□□□ -0.42
DNMT3A-215ENST00000496570 IGKV1D-39P04432 117 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms