RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 VSIG4Q9Y279 399 aa12.82□□□□□ -0.36
SF3A1-209ENST00000496189 MPPED1O15442 326 aa12.81□□□□□ -0.36
SF3A1-209ENST00000496189 HPRT1P00492 218 aa12.81□□□□□ -0.36
SF3A1-209ENST00000496189 ZNF735P0CB33 412 aa12.81□□□□□ -0.36
SF3A1-209ENST00000496189 F2RP25116 425 aa12.81□□□□□ -0.36
SF3A1-209ENST00000496189 NDPQ00604 133 aa12.81□□□□□ -0.36
SF3A1-209ENST00000496189 KLF9Q13886 244 aaPredicted RBP12.81□□□□□ -0.36
SF3A1-209ENST00000496189 SURF2Q15527 256 aaPredicted RBP12.81□□□□□ -0.36
SF3A1-209ENST00000496189 TNXAQ16473 311 aa12.81□□□□□ -0.36
SF3A1-209ENST00000496189 FAAP20Q6NZ36 180 aa12.81□□□□□ -0.36
SF3A1-209ENST00000496189 MMD2Q8IY49 270 aa12.81□□□□□ -0.36
SF3A1-209ENST00000496189 OR51S1Q8NGJ8 323 aa12.81□□□□□ -0.36
SF3A1-209ENST00000496189 C4orf3Q8WVX3 66 aa12.81□□□□□ -0.36
SF3A1-209ENST00000496189 S100ZQ8WXG8 99 aa12.81□□□□□ -0.36
SF3A1-209ENST00000496189 RCC1LQ96I51 464 aaKnown RBP12.81□□□□□ -0.36
SF3A1-209ENST00000496189 UBE2E2Q96LR5 201 aa12.81□□□□□ -0.36
SF3A1-209ENST00000496189 FAM103A1Q9BTL3 118 aaKnown RBP12.81□□□□□ -0.36
SF3A1-209ENST00000496189 SLA2Q9H6Q3 261 aa12.81□□□□□ -0.36
SF3A1-209ENST00000496189 SLC2A9Q9NRM0 540 aa12.81□□□□□ -0.36
SF3A1-209ENST00000496189 TPSG1Q9NRR2 321 aa12.81□□□□□ -0.36
SF3A1-209ENST00000496189 ZNF355PQ9NSJ1 428 aa12.81□□□□□ -0.36
SF3A1-209ENST00000496189 SLC2A8Q9NY64 477 aa12.81□□□□□ -0.36
SF3A1-209ENST00000496189 C14orf166Q9Y224 244 aaKnown RBP12.81□□□□□ -0.36
SF3A1-209ENST00000496189 NUBP2Q9Y5Y2 271 aa12.81□□□□□ -0.36
SF3A1-209ENST00000496189 VWFP04275 2813 aa12.8□□□□□ -0.36
SF3A1-209ENST00000496189 IGLV1-40P01703 118 aa12.8□□□□□ -0.36
SF3A1-209ENST00000496189 SAA1P0DJI8 122 aaPredicted RBP12.8□□□□□ -0.36
SF3A1-209ENST00000496189 RAB9AP51151 201 aa12.8□□□□□ -0.36
SF3A1-209ENST00000496189 RAB25P57735 213 aa12.8□□□□□ -0.36
SF3A1-209ENST00000496189 TAS2R31P59538 309 aa12.8□□□□□ -0.36
SF3A1-209ENST00000496189 RND3P61587 244 aa12.8□□□□□ -0.36
SF3A1-209ENST00000496189 DEFA6Q01524 100 aa12.8□□□□□ -0.36
SF3A1-209ENST00000496189 IDO2Q6ZQW0 420 aa12.8□□□□□ -0.36
SF3A1-209ENST00000496189 LCNL1Q6ZST4 164 aa12.8□□□□□ -0.36
SF3A1-209ENST00000496189 DPF1Q92782 380 aa12.8□□□□□ -0.36
SF3A1-209ENST00000496189 MCRIP2Q9BUT9 160 aaKnown RBP12.8□□□□□ -0.36
SF3A1-209ENST00000496189 PLEKHA2Q9HB19 425 aa12.8□□□□□ -0.36
SF3A1-209ENST00000496189 FAM212BQ9NTI7 297 aaPredicted RBP12.8□□□□□ -0.36
SF3A1-209ENST00000496189 COPZ2Q9P299 210 aa12.8□□□□□ -0.36
SF3A1-209ENST00000496189 FBXO7Q9Y3I1 522 aa12.8□□□□□ -0.36
SF3A1-209ENST00000496189 SRRM4A7MD48 611 aaKnown RBP12.79□□□□□ -0.36
SF3A1-209ENST00000496189 CCL24O00175 119 aa12.79□□□□□ -0.36
SF3A1-209ENST00000496189 RAMP3O60896 148 aa12.79□□□□□ -0.36
SF3A1-209ENST00000496189 OR2A4O95047 310 aa12.79□□□□□ -0.36
SF3A1-209ENST00000496189 CRYGBP07316 175 aa12.79□□□□□ -0.36
SF3A1-209ENST00000496189 CTSDP07339 412 aaPredicted RBP12.79□□□□□ -0.36
SF3A1-209ENST00000496189 NQO2P16083 231 aa12.79□□□□□ -0.36
SF3A1-209ENST00000496189 PIGPP57054 158 aa12.79□□□□□ -0.36
SF3A1-209ENST00000496189 ERVK-16P61578 105 aa12.79□□□□□ -0.36
SF3A1-209ENST00000496189 PJVKQ0ZLH3 352 aa12.79□□□□□ -0.36
SF3A1-209ENST00000496189 PRSS8Q16651 343 aa12.79□□□□□ -0.36
SF3A1-209ENST00000496189 TBC1D26Q86UD7 250 aa12.79□□□□□ -0.36
SF3A1-209ENST00000496189 OR13C8Q8NGS7 320 aa12.79□□□□□ -0.36
SF3A1-209ENST00000496189 MARCH1Q8TCQ1 289 aa12.79□□□□□ -0.36
SF3A1-209ENST00000496189 RHOVQ96L33 236 aa12.79□□□□□ -0.36
SF3A1-209ENST00000496189 OR2A7Q96R45 310 aa12.79□□□□□ -0.36
SF3A1-209ENST00000496189 HRASLSQ9HDD0 168 aa12.79□□□□□ -0.36
SF3A1-209ENST00000496189 COMMD9Q9P000 198 aa12.79□□□□□ -0.36
SF3A1-209ENST00000496189 CENPXA8MT69 81 aa12.78□□□□□ -0.36
SF3A1-209ENST00000496189 H3BUA1 57 aa12.78□□□□□ -0.36
SF3A1-209ENST00000496189 B3GALNT1O75752 331 aa12.78□□□□□ -0.36
SF3A1-209ENST00000496189 BRWD1-AS2P59051 145 aa12.78□□□□□ -0.36
SF3A1-209ENST00000496189 TPPP2P59282 170 aa12.78□□□□□ -0.36
SF3A1-209ENST00000496189 C1QL4Q86Z23 238 aa12.78□□□□□ -0.36
SF3A1-209ENST00000496189 ZNF491Q8N8L2 437 aa12.78□□□□□ -0.36
SF3A1-209ENST00000496189 WFDC9Q8NEX5 89 aa12.78□□□□□ -0.36
SF3A1-209ENST00000496189 DMBX1Q8NFW5 382 aa12.78□□□□□ -0.36
SF3A1-209ENST00000496189 SPIN2AQ99865 258 aa12.78□□□□□ -0.36
SF3A1-209ENST00000496189 SPIN2BQ9BPZ2 258 aa12.78□□□□□ -0.36
SF3A1-209ENST00000496189 A0A0G2JLM5 398 aa12.77□□□□□ -0.37
SF3A1-209ENST00000496189 NAP1L6A6NFF2 107 aa12.77□□□□□ -0.37
SF3A1-209ENST00000496189 G3V4G9 280 aa12.77□□□□□ -0.37
SF3A1-209ENST00000496189 ARPC1BO15143 372 aaKnown RBP12.77□□□□□ -0.37
SF3A1-209ENST00000496189 KBTBD11O94819 623 aa12.77□□□□□ -0.37
SF3A1-209ENST00000496189 TRGV3P03979 118 aa12.77□□□□□ -0.37
SF3A1-209ENST00000496189 SERPINE2P07093 398 aa12.77□□□□□ -0.37
SF3A1-209ENST00000496189 EGR2P11161 476 aaPredicted RBP12.77□□□□□ -0.37
SF3A1-209ENST00000496189 PI3P19957 117 aa12.77□□□□□ -0.37
SF3A1-209ENST00000496189 MAS1LP35410 378 aa12.77□□□□□ -0.37
SF3A1-209ENST00000496189 LPAR6P43657 344 aa12.77□□□□□ -0.37
SF3A1-209ENST00000496189 BAK1Q16611 211 aa12.77□□□□□ -0.37
SF3A1-209ENST00000496189 SAMD5Q5TGI4 173 aa12.77□□□□□ -0.37
SF3A1-209ENST00000496189 C18orf65Q6ZTR6 163 aa12.77□□□□□ -0.37
SF3A1-209ENST00000496189 MRPL41Q8IXM3 137 aaKnown RBP12.77□□□□□ -0.37
SF3A1-209ENST00000496189 VKORC1L1Q8N0U8 176 aa12.77□□□□□ -0.37
SF3A1-209ENST00000496189 LINC00482Q8N8I6 264 aa12.77□□□□□ -0.37
SF3A1-209ENST00000496189 OR4A5Q8NH83 315 aa12.77□□□□□ -0.37
SF3A1-209ENST00000496189 SRSF12Q8WXF0 261 aaKnown RBP12.77□□□□□ -0.37
SF3A1-209ENST00000496189 KLK15Q9H2R5 256 aa12.77□□□□□ -0.37
SF3A1-209ENST00000496189 ZNF430Q9H8G1 570 aaPredicted RBP12.77□□□□□ -0.37
SF3A1-209ENST00000496189 AKIP1Q9NQ31 210 aa12.77□□□□□ -0.37
SF3A1-209ENST00000496189 CMYA5Q8N3K9 4069 aa12.77□□□□□ -0.37
SF3A1-209ENST00000496189 C13orf42A0A1B0GVH6 325 aa12.76□□□□□ -0.37
SF3A1-209ENST00000496189 MSGN1A6NI15 193 aa12.76□□□□□ -0.37
SF3A1-209ENST00000496189 S1PR2O95136 353 aa12.76□□□□□ -0.37
SF3A1-209ENST00000496189 OR8U8P0C7N1 319 aa12.76□□□□□ -0.37
SF3A1-209ENST00000496189 IL7P13232 177 aa12.76□□□□□ -0.37
SF3A1-209ENST00000496189 IGLL1P15814 213 aa12.76□□□□□ -0.37
SF3A1-209ENST00000496189 RPA2P15927 270 aa12.76□□□□□ -0.37
SF3A1-209ENST00000496189 POU2AF1Q16633 256 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms