RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 SPANXN2Q5MJ10 180 aa7.67□□□□□ -1.18
CALD1-223ENST00000496024 OR4A47Q6IF82 309 aa7.67□□□□□ -1.18
CALD1-223ENST00000496024 CCDC190Q86UF4 302 aa7.67□□□□□ -1.18
CALD1-223ENST00000496024 LHFPL1Q86WI0 220 aa7.67□□□□□ -1.18
CALD1-223ENST00000496024 C1QL4Q86Z23 238 aa7.67□□□□□ -1.18
CALD1-223ENST00000496024 ZNF695Q8IW36 515 aa7.67□□□□□ -1.18
CALD1-223ENST00000496024 MMD2Q8IY49 270 aa7.67□□□□□ -1.18
CALD1-223ENST00000496024 SLC38A6Q8IZM9 456 aa7.67□□□□□ -1.18
CALD1-223ENST00000496024 ARRDC1Q8N5I2 433 aa7.67□□□□□ -1.18
CALD1-223ENST00000496024 MINDY2Q8NBR6 621 aa7.67□□□□□ -1.18
CALD1-223ENST00000496024 DMBX1Q8NFW5 382 aa7.67□□□□□ -1.18
CALD1-223ENST00000496024 TERB2Q8NHR7 220 aa7.67□□□□□ -1.18
CALD1-223ENST00000496024 MARCH1Q8TCQ1 289 aa7.67□□□□□ -1.18
CALD1-223ENST00000496024 THAP7Q9BT49 309 aaPredicted RBP7.67□□□□□ -1.18
CALD1-223ENST00000496024 ZNF580Q9UK33 172 aa7.67□□□□□ -1.18
CALD1-223ENST00000496024 V9GYH0 126 aa7.67□□□□□ -1.18
CALD1-223ENST00000496024 TRAV3A0A0B4J244 114 aa7.66□□□□□ -1.18
CALD1-223ENST00000496024 ANKRD20A5PA0PJZ0 165 aa7.66□□□□□ -1.18
CALD1-223ENST00000496024 RBFOX2O43251 390 aaKnown RBP eCLIP7.66□□□□□ -1.18
CALD1-223ENST00000496024 CREBL2O60519 120 aaPredicted RBP7.66□□□□□ -1.18
CALD1-223ENST00000496024 KBTBD11O94819 623 aa7.66□□□□□ -1.18
CALD1-223ENST00000496024 HPRT1P00492 218 aa7.66□□□□□ -1.18
CALD1-223ENST00000496024 NQO2P16083 231 aa7.66□□□□□ -1.18
CALD1-223ENST00000496024 RAB9AP51151 201 aa7.66□□□□□ -1.18
CALD1-223ENST00000496024 PIGPP57054 158 aa7.66□□□□□ -1.18
CALD1-223ENST00000496024 RAB25P57735 213 aa7.66□□□□□ -1.18
CALD1-223ENST00000496024 TPPP2P59282 170 aa7.66□□□□□ -1.18
CALD1-223ENST00000496024 TAS2R31P59538 309 aa7.66□□□□□ -1.18
CALD1-223ENST00000496024 DEFA5Q01523 94 aa7.66□□□□□ -1.18
CALD1-223ENST00000496024 ASPHD1Q5U4P2 390 aa7.66□□□□□ -1.18
CALD1-223ENST00000496024 PUSL1Q8N0Z8 303 aaKnown RBP7.66□□□□□ -1.18
CALD1-223ENST00000496024 Q8N402 240 aa7.66□□□□□ -1.18
CALD1-223ENST00000496024 TCTEX1D1Q8N7M0 179 aa7.66□□□□□ -1.18
CALD1-223ENST00000496024 OR51S1Q8NGJ8 323 aa7.66□□□□□ -1.18
CALD1-223ENST00000496024 OR6Q1Q8NGQ2 317 aa7.66□□□□□ -1.18
CALD1-223ENST00000496024 OR13C8Q8NGS7 320 aa7.66□□□□□ -1.18
CALD1-223ENST00000496024 VSTM2AQ8TAG5 236 aa7.66□□□□□ -1.18
CALD1-223ENST00000496024 TMEM167AQ8TBQ9 72 aa7.66□□□□□ -1.18
CALD1-223ENST00000496024 CD300LFQ8TDQ1 290 aa7.66□□□□□ -1.18
CALD1-223ENST00000496024 SRSF12Q8WXF0 261 aaKnown RBP7.66□□□□□ -1.18
CALD1-223ENST00000496024 FYTTD1Q96QD9 318 aaKnown RBP7.66□□□□□ -1.18
CALD1-223ENST00000496024 AIFM2Q9BRQ8 373 aa7.66□□□□□ -1.18
CALD1-223ENST00000496024 GNB4Q9HAV0 340 aa7.66□□□□□ -1.18
CALD1-223ENST00000496024 SLC2A9Q9NRM0 540 aa7.66□□□□□ -1.18
CALD1-223ENST00000496024 MCUBQ9NWR8 336 aa7.66□□□□□ -1.18
CALD1-223ENST00000496024 HMX3A6NHT5 357 aa7.65□□□□□ -1.18
CALD1-223ENST00000496024 KRASP01116 189 aa7.65□□□□□ -1.18
CALD1-223ENST00000496024 IGHV3-11P01762 117 aa7.65□□□□□ -1.18
CALD1-223ENST00000496024 TRGV3P03979 118 aa7.65□□□□□ -1.18
CALD1-223ENST00000496024 CD33P20138 364 aa7.65□□□□□ -1.18
CALD1-223ENST00000496024 CD40LGP29965 261 aa7.65□□□□□ -1.18
CALD1-223ENST00000496024 G6PCP35575 357 aa7.65□□□□□ -1.18
CALD1-223ENST00000496024 RPL27AP46776 148 aaKnown RBP7.65□□□□□ -1.18
CALD1-223ENST00000496024 CDX1P47902 265 aaPredicted RBP7.65□□□□□ -1.18
CALD1-223ENST00000496024 ERVK-16P61578 105 aa7.65□□□□□ -1.18
CALD1-223ENST00000496024 ZNF79Q15937 498 aa7.65□□□□□ -1.18
CALD1-223ENST00000496024 ZNF585BQ52M93 769 aa7.65□□□□□ -1.18
CALD1-223ENST00000496024 ETV3LQ6ZN32 361 aa7.65□□□□□ -1.18
CALD1-223ENST00000496024 ZNF491Q8N8L2 437 aa7.65□□□□□ -1.18
CALD1-223ENST00000496024 RNF152Q8N8N0 203 aa7.65□□□□□ -1.18
CALD1-223ENST00000496024 OR5M8Q8NGP6 311 aa7.65□□□□□ -1.18
CALD1-223ENST00000496024 ZFAND1Q8TCF1 268 aa7.65□□□□□ -1.18
CALD1-223ENST00000496024 RAX2Q96IS3 184 aa7.65□□□□□ -1.18
CALD1-223ENST00000496024 PLEKHA2Q9HB19 425 aa7.65□□□□□ -1.18
CALD1-223ENST00000496024 TMEM140Q9NV12 185 aa7.65□□□□□ -1.18
CALD1-223ENST00000496024 COA4Q9NYJ1 87 aa7.65□□□□□ -1.18
CALD1-223ENST00000496024 COMMD9Q9P000 198 aa7.65□□□□□ -1.18
CALD1-223ENST00000496024 COPZ2Q9P299 210 aa7.65□□□□□ -1.18
CALD1-223ENST00000496024 VSIG4Q9Y279 399 aa7.65□□□□□ -1.18
CALD1-223ENST00000496024 E7EUB6 86 aa7.64□□□□□ -1.19
CALD1-223ENST00000496024 G3V4G9 280 aa7.64□□□□□ -1.19
CALD1-223ENST00000496024 CCL24O00175 119 aa7.64□□□□□ -1.19
CALD1-223ENST00000496024 UPK2O00526 184 aa7.64□□□□□ -1.19
CALD1-223ENST00000496024 PRH1P02810 166 aa7.64□□□□□ -1.19
CALD1-223ENST00000496024 SERPINE2P07093 398 aa7.64□□□□□ -1.19
CALD1-223ENST00000496024 HLA-GP17693 338 aa7.64□□□□□ -1.19
CALD1-223ENST00000496024 RPL8P62917 257 aaKnown RBP7.64□□□□□ -1.19
CALD1-223ENST00000496024 KIAA0141Q14154 515 aaPredicted RBP7.64□□□□□ -1.19
CALD1-223ENST00000496024 SP6Q3SY56 376 aa7.64□□□□□ -1.19
CALD1-223ENST00000496024 ZNF57Q68EA5 555 aaPredicted RBP7.64□□□□□ -1.19
CALD1-223ENST00000496024 C19orf35Q6ZS72 473 aa7.64□□□□□ -1.19
CALD1-223ENST00000496024 MRPL41Q8IXM3 137 aaKnown RBP7.64□□□□□ -1.19
CALD1-223ENST00000496024 TOMM5Q8N4H5 51 aa7.64□□□□□ -1.19
CALD1-223ENST00000496024 CCDC71LQ8N9Z2 235 aa7.64□□□□□ -1.19
CALD1-223ENST00000496024 C4orf3Q8WVX3 66 aa7.64□□□□□ -1.19
CALD1-223ENST00000496024 MRGPRFQ96AM1 343 aa7.64□□□□□ -1.19
CALD1-223ENST00000496024 ZNF486Q96H40 463 aaPredicted RBP7.64□□□□□ -1.19
CALD1-223ENST00000496024 UBE2E2Q96LR5 201 aa7.64□□□□□ -1.19
CALD1-223ENST00000496024 SPIN2AQ99865 258 aa7.64□□□□□ -1.19
CALD1-223ENST00000496024 PRRT1Q99946 306 aa7.64□□□□□ -1.19
CALD1-223ENST00000496024 SPIN2BQ9BPZ2 258 aa7.64□□□□□ -1.19
CALD1-223ENST00000496024 ALX4Q9H161 411 aaPredicted RBP7.64□□□□□ -1.19
CALD1-223ENST00000496024 BET1LQ9NYM9 111 aa7.64□□□□□ -1.19
CALD1-223ENST00000496024 C14orf166Q9Y224 244 aaKnown RBP7.64□□□□□ -1.19
CALD1-223ENST00000496024 NSG2Q9Y328 171 aa7.64□□□□□ -1.19
CALD1-223ENST00000496024 DNAH3Q8TD57 4116 aa7.63□□□□□ -1.19
CALD1-223ENST00000496024 TEX13DA0A0J9YY54 714 aaPredicted RBP7.63□□□□□ -1.19
CALD1-223ENST00000496024 LINC00854A0A1B0GVQ3 168 aa7.63□□□□□ -1.19
CALD1-223ENST00000496024 MARCH11A6NNE9 402 aa7.63□□□□□ -1.19
CALD1-223ENST00000496024 REG1AP05451 166 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms