RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	SLC25A17	O43808	307 aa		10.83	□□□□□ -0.68
APTX-231	ENST00000494973	LY86	O95711	162 aa		10.83	□□□□□ -0.68
APTX-231	ENST00000494973	IGKV1-39	P01597	117 aa		10.83	□□□□□ -0.68
APTX-231	ENST00000494973	IGKV1-5	P01602	117 aa		10.83	□□□□□ -0.68
APTX-231	ENST00000494973	IGLV2-23	P01705	113 aa		10.83	□□□□□ -0.68
APTX-231	ENST00000494973	IGKV1D-39	P04432	117 aa		10.83	□□□□□ -0.68
APTX-231	ENST00000494973	HOXB5	P09067	269 aa		10.83	□□□□□ -0.68
APTX-231	ENST00000494973	HNF4G	Q14541	408 aa		10.83	□□□□□ -0.68
APTX-231	ENST00000494973	SMCO1	Q147U7	214 aa		10.83	□□□□□ -0.68
APTX-231	ENST00000494973	C5orf64	Q2M2E5	130 aa		10.83	□□□□□ -0.68
APTX-231	ENST00000494973	GGNBP1	Q5YKI7	109 aa		10.83	□□□□□ -0.68
APTX-231	ENST00000494973	LYZL2	Q7Z4W2	148 aa		10.83	□□□□□ -0.68
APTX-231	ENST00000494973	PPP1R27	Q86WC6	154 aa		10.83	□□□□□ -0.68
APTX-231	ENST00000494973	PIFO	Q8TCI5	191 aa		10.83	□□□□□ -0.68
APTX-231	ENST00000494973	ZNF48	Q96MX3	618 aa	Predicted RBP	10.83	□□□□□ -0.68
APTX-231	ENST00000494973	MGAT4C	Q9UBM8	478 aa		10.83	□□□□□ -0.68
APTX-231	ENST00000494973	ZNF257	Q9Y2Q1	563 aa		10.83	□□□□□ -0.68
APTX-231	ENST00000494973	C5orf51	A6NDU8	294 aa		10.82	□□□□□ -0.68
APTX-231	ENST00000494973	FAM90A26	D6RGX4	464 aa		10.82	□□□□□ -0.68
APTX-231	ENST00000494973	GOSR2	O14653	212 aa		10.82	□□□□□ -0.68
APTX-231	ENST00000494973	HOXA3	O43365	443 aa	Predicted RBP	10.82	□□□□□ -0.68
APTX-231	ENST00000494973	RBMXL2	O75526	392 aa	Known RBP	10.82	□□□□□ -0.68
APTX-231	ENST00000494973	IGHV4-59	P01825	116 aa		10.82	□□□□□ -0.68
APTX-231	ENST00000494973		P0C879	139 aa		10.82	□□□□□ -0.68
APTX-231	ENST00000494973	PAX6	P26367	422 aa		10.82	□□□□□ -0.68
APTX-231	ENST00000494973	RPL8	P62917	257 aa	Known RBP	10.82	□□□□□ -0.68
APTX-231	ENST00000494973	SSX9	Q7RTT3	188 aa		10.82	□□□□□ -0.68
APTX-231	ENST00000494973	ZNF429	Q86V71	674 aa		10.82	□□□□□ -0.68
APTX-231	ENST00000494973	OR5B3	Q8NH48	314 aa		10.82	□□□□□ -0.68
APTX-231	ENST00000494973	COMMD5	Q9GZQ3	224 aa		10.82	□□□□□ -0.68
APTX-231	ENST00000494973	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	10.82	□□□□□ -0.68
APTX-231	ENST00000494973	PRR13	Q9NZ81	148 aa		10.82	□□□□□ -0.68
APTX-231	ENST00000494973	SIGLEC9	Q9Y336	463 aa		10.82	□□□□□ -0.68
APTX-231	ENST00000494973	HMX3	A6NHT5	357 aa		10.81	□□□□□ -0.68
APTX-231	ENST00000494973	C15orf61	A6NNL5	157 aa		10.81	□□□□□ -0.68
APTX-231	ENST00000494973	FAM25E	A8MYX2	175 aa		10.81	□□□□□ -0.68
APTX-231	ENST00000494973	UPK2	O00526	184 aa		10.81	□□□□□ -0.68
APTX-231	ENST00000494973	KCNAB3	O43448	404 aa		10.81	□□□□□ -0.68
APTX-231	ENST00000494973	HLA-DRB1	P01911	266 aa		10.81	□□□□□ -0.68
APTX-231	ENST00000494973	PET100	P0DJ07	73 aa		10.81	□□□□□ -0.68
APTX-231	ENST00000494973	CD24	P25063	80 aa		10.81	□□□□□ -0.68
APTX-231	ENST00000494973	HILS1	P60008	231 aa		10.81	□□□□□ -0.68
APTX-231	ENST00000494973	LY6E	Q16553	131 aa		10.81	□□□□□ -0.68
APTX-231	ENST00000494973	IAH1	Q2TAA2	248 aa	Predicted RBP	10.81	□□□□□ -0.68
APTX-231	ENST00000494973	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	10.81	□□□□□ -0.68
APTX-231	ENST00000494973	FAM71E2	Q8N5Q1	922 aa		10.81	□□□□□ -0.68
APTX-231	ENST00000494973	OR1S1	Q8NH92	325 aa		10.81	□□□□□ -0.68
APTX-231	ENST00000494973	C2orf50	Q96LR7	162 aa		10.81	□□□□□ -0.68
APTX-231	ENST00000494973	NPFFR1	Q9GZQ6	430 aa		10.81	□□□□□ -0.68
APTX-231	ENST00000494973	RANBP3	Q9H6Z4	567 aa	Predicted RBP	10.81	□□□□□ -0.68
APTX-231	ENST00000494973	CACNG5	Q9UF02	275 aa		10.81	□□□□□ -0.68
APTX-231	ENST00000494973	FOXA2	Q9Y261	457 aa	Predicted RBP	10.81	□□□□□ -0.68
APTX-231	ENST00000494973	SOX21	Q9Y651	276 aa	Predicted RBP	10.81	□□□□□ -0.68
APTX-231	ENST00000494973	NSD1	Q96L73	2696 aa	Predicted RBP	10.81	□□□□□ -0.68
APTX-231	ENST00000494973	MTOR	P42345	2549 aa		10.8	□□□□□ -0.68
APTX-231	ENST00000494973	C13orf42	A0A1B0GVH6	325 aa		10.8	□□□□□ -0.68
APTX-231	ENST00000494973	DNAJC9-AS1	A6NH13	148 aa		10.8	□□□□□ -0.68
APTX-231	ENST00000494973	SRRM4	A7MD48	611 aa	Known RBP	10.8	□□□□□ -0.68
APTX-231	ENST00000494973	TCF21	O43680	179 aa		10.8	□□□□□ -0.68
APTX-231	ENST00000494973	MED6	O75586	246 aa		10.8	□□□□□ -0.68
APTX-231	ENST00000494973	ADAP1	O75689	374 aa		10.8	□□□□□ -0.68
APTX-231	ENST00000494973	CRYGB	P07316	175 aa		10.8	□□□□□ -0.68
APTX-231	ENST00000494973	IL6R	P08887	468 aa	Predicted RBP	10.8	□□□□□ -0.68
APTX-231	ENST00000494973	PRSS8	Q16651	343 aa		10.8	□□□□□ -0.68
APTX-231	ENST00000494973	AARD	Q4LEZ3	155 aa		10.8	□□□□□ -0.68
APTX-231	ENST00000494973		Q71RC1	249 aa	Predicted RBP	10.8	□□□□□ -0.68
APTX-231	ENST00000494973	VKORC1L1	Q8N0U8	176 aa		10.8	□□□□□ -0.68
APTX-231	ENST00000494973	C5orf56	Q8N8D9	126 aa		10.8	□□□□□ -0.68
APTX-231	ENST00000494973		Q8N9W7	124 aa		10.8	□□□□□ -0.68
APTX-231	ENST00000494973	OR52E5	Q8NH55	327 aa		10.8	□□□□□ -0.68
APTX-231	ENST00000494973	CHAC2	Q8WUX2	184 aa		10.8	□□□□□ -0.68
APTX-231	ENST00000494973	GPR146	Q96CH1	333 aa		10.8	□□□□□ -0.68
APTX-231	ENST00000494973	CLCC1	Q96S66	551 aa		10.8	□□□□□ -0.68
APTX-231	ENST00000494973	SRSF8	Q9BRL6	282 aa	Known RBP	10.8	□□□□□ -0.68
APTX-231	ENST00000494973	NMES1	Q9C002	83 aa		10.8	□□□□□ -0.68
APTX-231	ENST00000494973	FBXL15	Q9H469	300 aa		10.8	□□□□□ -0.68
APTX-231	ENST00000494973	PLSCR3	Q9NRY6	295 aa		10.8	□□□□□ -0.68
APTX-231	ENST00000494973	GIP	P09681	153 aa	Predicted RBP	10.79	□□□□□ -0.68
APTX-231	ENST00000494973	BCAP31	P51572	246 aa		10.79	□□□□□ -0.68
APTX-231	ENST00000494973	F2RL1	P55085	397 aa		10.79	□□□□□ -0.68
APTX-231	ENST00000494973	RELB	Q01201	579 aa		10.79	□□□□□ -0.68
APTX-231	ENST00000494973	FGL1	Q08830	312 aa		10.79	□□□□□ -0.68
APTX-231	ENST00000494973	FCN2	Q15485	313 aa		10.79	□□□□□ -0.68
APTX-231	ENST00000494973	ZNF562	Q6V9R5	426 aa		10.79	□□□□□ -0.68
APTX-231	ENST00000494973	TMEM219	Q86XT9	240 aa		10.79	□□□□□ -0.68
APTX-231	ENST00000494973	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	10.79	□□□□□ -0.68
APTX-231	ENST00000494973	OR1L8	Q8NGR8	309 aa		10.79	□□□□□ -0.68
APTX-231	ENST00000494973	ZNF430	Q9H8G1	570 aa	Predicted RBP	10.79	□□□□□ -0.68
APTX-231	ENST00000494973	ENY2	Q9NPA8	101 aa		10.79	□□□□□ -0.68
APTX-231	ENST00000494973	TMEM14B	Q9NUH8	114 aa		10.79	□□□□□ -0.68
APTX-231	ENST00000494973		A0A0G2JRQ6	117 aa		10.78	□□□□□ -0.68
APTX-231	ENST00000494973		A0A1W2PN81	502 aa		10.78	□□□□□ -0.68
APTX-231	ENST00000494973	TRIM77	I1YAP6	450 aa		10.78	□□□□□ -0.68
APTX-231	ENST00000494973	WRB	O00258	174 aa		10.78	□□□□□ -0.68
APTX-231	ENST00000494973	CCS	O14618	274 aa		10.78	□□□□□ -0.68
APTX-231	ENST00000494973	CNIH1	O95406	144 aa		10.78	□□□□□ -0.68
APTX-231	ENST00000494973	CA2	P00918	260 aa		10.78	□□□□□ -0.68
APTX-231	ENST00000494973	CRYBA1	P05813	215 aa		10.78	□□□□□ -0.68
APTX-231	ENST00000494973	RNASE1	P07998	156 aa	Known RBP	10.78	□□□□□ -0.68
APTX-231	ENST00000494973	OR9G9	P0C7N8	305 aa		10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms