RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 PHF7Q9BWX1 381 aaPredicted RBP4□□□□□ -1.77
PRKD3-210ENST00000494667 TMEM133Q9H2Q1 129 aa4□□□□□ -1.77
PRKD3-210ENST00000494667 METTL7AQ9H8H3 244 aa4□□□□□ -1.77
PRKD3-210ENST00000494667 BOKQ9UMX3 212 aaPredicted RBP4□□□□□ -1.77
PRKD3-210ENST00000494667 HLA-DRB4X5D2U9 266 aa4□□□□□ -1.77
PRKD3-210ENST00000494667 TRAV26-1A0A087WT03 109 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 F8W1H4 67 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 M0R296 226 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 M0R2Z0 102 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 PIGYQ3MUY2 71 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 OR4A16Q8NH70 328 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 BLNKQ8WV28 456 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 CHRDL1Q9BU40 450 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 HEYLQ9NQ87 328 aaPredicted RBP3.99□□□□□ -1.77
PRKD3-210ENST00000494667 MRPL16Q9NX20 251 aaKnown RBP3.99□□□□□ -1.77
PRKD3-210ENST00000494667 MED29Q9NX70 200 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 LSM4Q9Y4Z0 139 aaKnown RBP3.99□□□□□ -1.77
PRKD3-210ENST00000494667 WNT6Q9Y6F9 365 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 hCG_38984A0A1B0GV85 526 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 NPIPA3F8WFD2 350 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 H3BP45 60 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 J3QR89 54 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 RAB29O14966 203 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 DHHO43323 396 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 GNG7O60262 68 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 FRMD6-AS1P0C7T7 363 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 IL12BP29460 328 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 RPS18P62269 152 aaKnown RBP3.99□□□□□ -1.77
PRKD3-210ENST00000494667 TFF3Q07654 80 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 CT83Q5H943 113 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 TEX45Q8NA69 505 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 OR10AG1Q8NH19 301 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 ZNF418Q8TF45 676 aaPredicted RBP3.99□□□□□ -1.77
PRKD3-210ENST00000494667 TMEM190Q8WZ59 177 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 SPTSSAQ969W0 71 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 C5orf30Q96GV9 206 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 SPANXB1Q9NS25 103 aaPredicted RBP3.99□□□□□ -1.77
PRKD3-210ENST00000494667 HIGD1BQ9P298 99 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 YTHDF2Q9Y5A9 579 aaKnown RBP3.99□□□□□ -1.77
PRKD3-210ENST00000494667 PCDH15Q96QU1 1955 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 SPTBP11277 2137 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 A0A0G2JLM5 398 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 VWC2LB2RUY7 222 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 SLC17A3O00476 420 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 HSBP1O75506 76 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 LIPFP07098 398 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 GCHFRP30047 84 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 RPL31P62899 125 aaKnown RBP3.99□□□□□ -1.77
PRKD3-210ENST00000494667 SLAQ13239 276 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 TMEM108Q6UXF1 575 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 ADAMTSL5Q6ZMM2 481 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 ERASQ7Z444 233 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 TTC9CQ8N5M4 171 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 OR52E5Q8NH55 327 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 OR4A5Q8NH83 315 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 OR1F12Q8NHA8 337 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 C2CD4DB7Z1M9 353 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 M0R135 149 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 SYNGR3O43761 229 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 SCTP09683 121 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 GLI4P10075 376 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 IAPPP10997 89 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 HTR1DP28221 377 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 PLP1P60201 277 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 GABRA6Q16445 453 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 CEACAM21Q3KPI0 293 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 Q56UQ5 140 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 C2orf27AQ580R0 203 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 SPATA46Q5T0L3 261 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 BORCS8Q96FH0 119 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 ZNF799Q96GE5 643 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 HCFC1R1Q9NWW0 138 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 PPP1R3CQ9UQK1 317 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 RALGAPA1Q6GYQ0 2036 aa3.99□□□□□ -1.77
PRKD3-210ENST00000494667 hADV38S2A0JD32 116 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 PGPEP1LA6NFU8 196 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 CT45A10P0DMU9 189 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 CTGFP29279 349 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 CEBPDP49716 269 aaPredicted RBP3.98□□□□□ -1.77
PRKD3-210ENST00000494667 C17orf67Q0P5P2 114 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 NNATQ16517 81 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 SPANXN5Q5MJ07 72 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 FAM27BQ5VT28 67 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 Q6P435 159 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 SHISA6Q6ZSJ9 500 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 FAM19A2Q8N3H0 131 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 ZNF502Q8TBZ5 544 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 CLDN23Q96B33 292 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 NDFIP1Q9BT67 221 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 RABAC1Q9UI14 185 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 IGHV1-24A0A0C4DH33 117 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 C15orf62A8K5M9 175 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 RRHO14718 337 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 NEURL1O76050 574 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 CRYAAP02489 173 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 HNRNPA1P09651 372 aaKnown RBP eCLIP3.98□□□□□ -1.77
PRKD3-210ENST00000494667 ARL14EPLP0DKL9 152 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 MFAP5Q13361 173 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 CST6Q15828 149 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 C19orf24Q9BVV8 132 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms