RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 ACOT13Q9NPJ3 140 aa7.24□□□□□ -1.25
UBR4-216ENST00000494503 TAS2R8Q9NYW2 309 aa7.24□□□□□ -1.25
UBR4-216ENST00000494503 HYDINQ4G0P3 5121 aa7.24□□□□□ -1.25
UBR4-216ENST00000494503 IGKV1D-8A0A087WSZ0 117 aa7.23□□□□□ -1.25
UBR4-216ENST00000494503 A0A0J9YWU9 116 aa7.23□□□□□ -1.25
UBR4-216ENST00000494503 TNFSF12O43508 249 aa7.23□□□□□ -1.25
UBR4-216ENST00000494503 KBTBD11O94819 623 aa7.23□□□□□ -1.25
UBR4-216ENST00000494503 NDUFB8O95169 186 aa7.23□□□□□ -1.25
UBR4-216ENST00000494503 AREGP15514 252 aa7.23□□□□□ -1.25
UBR4-216ENST00000494503 MECP2P51608 486 aaKnown RBP7.23□□□□□ -1.25
UBR4-216ENST00000494503 ZNF585BQ52M93 769 aa7.23□□□□□ -1.25
UBR4-216ENST00000494503 TM4SF20Q53R12 229 aa7.23□□□□□ -1.25
UBR4-216ENST00000494503 OR4A47Q6IF82 309 aa7.23□□□□□ -1.25
UBR4-216ENST00000494503 OR1L6Q8NGR2 347 aa7.23□□□□□ -1.25
UBR4-216ENST00000494503 OR2A7Q96R45 310 aa7.23□□□□□ -1.25
UBR4-216ENST00000494503 MGLLQ99685 303 aa7.23□□□□□ -1.25
UBR4-216ENST00000494503 MLXQ9UH92 298 aa7.23□□□□□ -1.25
UBR4-216ENST00000494503 UBQLN2Q9UHD9 624 aa7.23□□□□□ -1.25
UBR4-216ENST00000494503 ELF5Q9UKW6 265 aaPredicted RBP7.23□□□□□ -1.25
UBR4-216ENST00000494503 RBMX2Q9Y388 322 aaKnown RBP7.23□□□□□ -1.25
UBR4-216ENST00000494503 OR2W1Q9Y3N9 320 aa7.23□□□□□ -1.25
UBR4-216ENST00000494503 TMEM213A2RRL7 107 aa7.22□□□□□ -1.25
UBR4-216ENST00000494503 NUPR2A6NF83 97 aa7.22□□□□□ -1.25
UBR4-216ENST00000494503 IFITM5A6NNB3 132 aa7.22□□□□□ -1.25
UBR4-216ENST00000494503 NPIPB5A8MRT5 1133 aa7.22□□□□□ -1.25
UBR4-216ENST00000494503 TEX22C9J3V5 150 aa7.22□□□□□ -1.25
UBR4-216ENST00000494503 LGALS9O00182 355 aa7.22□□□□□ -1.25
UBR4-216ENST00000494503 DIRAS3O95661 229 aa7.22□□□□□ -1.25
UBR4-216ENST00000494503 CD37P11049 281 aa7.22□□□□□ -1.25
UBR4-216ENST00000494503 MYOD1P15172 320 aa7.22□□□□□ -1.25
UBR4-216ENST00000494503 RAB3BP20337 219 aa7.22□□□□□ -1.25
UBR4-216ENST00000494503 RAB6AP20340 208 aa7.22□□□□□ -1.25
UBR4-216ENST00000494503 GPR183P32249 361 aa7.22□□□□□ -1.25
UBR4-216ENST00000494503 AQP4P55087 323 aa7.22□□□□□ -1.25
UBR4-216ENST00000494503 GNG2P59768 71 aa7.22□□□□□ -1.25
UBR4-216ENST00000494503 RPL30P62888 115 aaKnown RBP7.22□□□□□ -1.25
UBR4-216ENST00000494503 IRF3Q14653 427 aa7.22□□□□□ -1.25
UBR4-216ENST00000494503 DEFB135Q30KP9 77 aa7.22□□□□□ -1.25
UBR4-216ENST00000494503 SLC38A6Q8IZM9 456 aa7.22□□□□□ -1.25
UBR4-216ENST00000494503 NUDCD2Q8WVJ2 157 aa7.22□□□□□ -1.25
UBR4-216ENST00000494503 CCDC140Q96MF4 163 aa7.22□□□□□ -1.25
UBR4-216ENST00000494503 GPHA2Q96T91 129 aa7.22□□□□□ -1.25
UBR4-216ENST00000494503 HSD17B10Q99714 261 aaKnown RBP7.22□□□□□ -1.25
UBR4-216ENST00000494503 OVOL2Q9BRP0 275 aa7.22□□□□□ -1.25
UBR4-216ENST00000494503 IGKV1D-13A0A0B4J2D9 117 aa7.21□□□□□ -1.26
UBR4-216ENST00000494503 TMEM235A6NFC5 223 aa7.21□□□□□ -1.26
UBR4-216ENST00000494503 MFSD2BA6NFX1 497 aa7.21□□□□□ -1.26
UBR4-216ENST00000494503 CASQ2O14958 399 aaPredicted RBP7.21□□□□□ -1.26
UBR4-216ENST00000494503 SLC22A5O76082 557 aa7.21□□□□□ -1.26
UBR4-216ENST00000494503 HRASP01112 189 aa7.21□□□□□ -1.26
UBR4-216ENST00000494503 CLEC3BP05452 202 aa7.21□□□□□ -1.26
UBR4-216ENST00000494503 IL6RP08887 468 aaPredicted RBP7.21□□□□□ -1.26
UBR4-216ENST00000494503 CTXN2P0C2S0 81 aa7.21□□□□□ -1.26
UBR4-216ENST00000494503 IGKV1-13P0DP09 117 aa7.21□□□□□ -1.26
UBR4-216ENST00000494503 HIST1H1BP16401 226 aaKnown RBP7.21□□□□□ -1.26
UBR4-216ENST00000494503 RPL35AP18077 110 aaKnown RBP7.21□□□□□ -1.26
UBR4-216ENST00000494503 DTYMKP23919 212 aa7.21□□□□□ -1.26
UBR4-216ENST00000494503 PSMB6P28072 239 aa7.21□□□□□ -1.26
UBR4-216ENST00000494503 APOC4P55056 127 aa7.21□□□□□ -1.26
UBR4-216ENST00000494503 ARPC4P59998 168 aa7.21□□□□□ -1.26
UBR4-216ENST00000494503 RPL8P62917 257 aaKnown RBP7.21□□□□□ -1.26
UBR4-216ENST00000494503 ARL6IP1Q15041 203 aa7.21□□□□□ -1.26
UBR4-216ENST00000494503 CDNFQ49AH0 187 aa7.21□□□□□ -1.26
UBR4-216ENST00000494503 PLET1Q6UQ28 207 aa7.21□□□□□ -1.26
UBR4-216ENST00000494503 LYG2Q86SG7 212 aa7.21□□□□□ -1.26
UBR4-216ENST00000494503 GPHB5Q86YW7 130 aa7.21□□□□□ -1.26
UBR4-216ENST00000494503 SECTM1Q8WVN6 248 aa7.21□□□□□ -1.26
UBR4-216ENST00000494503 CXorf58Q96LI9 332 aa7.21□□□□□ -1.26
UBR4-216ENST00000494503 SLC2A9Q9NRM0 540 aa7.21□□□□□ -1.26
UBR4-216ENST00000494503 KLK5Q9Y337 293 aaPredicted RBP7.21□□□□□ -1.26
UBR4-216ENST00000494503 TRBV7-1A0A0A6YYK4 115 aa7.2□□□□□ -1.26
UBR4-216ENST00000494503 ANKRD65E5RJM6 399 aa7.2□□□□□ -1.26
UBR4-216ENST00000494503 E7EUB6 86 aa7.2□□□□□ -1.26
UBR4-216ENST00000494503 SPRY2O43597 315 aa7.2□□□□□ -1.26
UBR4-216ENST00000494503 FCER2P06734 321 aa7.2□□□□□ -1.26
UBR4-216ENST00000494503 RPA2P15927 270 aa7.2□□□□□ -1.26
UBR4-216ENST00000494503 HLA-GP17693 338 aa7.2□□□□□ -1.26
UBR4-216ENST00000494503 MAS1LP35410 378 aa7.2□□□□□ -1.26
UBR4-216ENST00000494503 HACD4Q5VWC8 232 aa7.2□□□□□ -1.26
UBR4-216ENST00000494503 C22orf42Q6IC83 251 aa7.2□□□□□ -1.26
UBR4-216ENST00000494503 UNQ9165/PRO28630Q6UXU0 137 aa7.2□□□□□ -1.26
UBR4-216ENST00000494503 ZNF367Q7RTV3 350 aa7.2□□□□□ -1.26
UBR4-216ENST00000494503 PRSS48Q7RTY5 328 aa7.2□□□□□ -1.26
UBR4-216ENST00000494503 MFSD4AQ8N468 514 aa7.2□□□□□ -1.26
UBR4-216ENST00000494503 TMEM167AQ8TBQ9 72 aa7.2□□□□□ -1.26
UBR4-216ENST00000494503 C20orf24Q9BUV8 137 aa7.2□□□□□ -1.26
UBR4-216ENST00000494503 UFC1Q9Y3C8 167 aa7.2□□□□□ -1.26
UBR4-216ENST00000494503 ALMS1Q8TCU4 4167 aa7.19□□□□□ -1.26
UBR4-216ENST00000494503 IGHV3OR16-8A0A075B7F1 116 aa7.19□□□□□ -1.26
UBR4-216ENST00000494503 TRAV1-2A0A0B4J238 106 aa7.19□□□□□ -1.26
UBR4-216ENST00000494503 OR2T8A6NH00 312 aa7.19□□□□□ -1.26
UBR4-216ENST00000494503 A8MWP6 167 aa7.19□□□□□ -1.26
UBR4-216ENST00000494503 CYB5BO43169 146 aa7.19□□□□□ -1.26
UBR4-216ENST00000494503 HLA-DQB1P01920 261 aa7.19□□□□□ -1.26
UBR4-216ENST00000494503 ZNF735P0CB33 412 aa7.19□□□□□ -1.26
UBR4-216ENST00000494503 BMI1P35226 326 aa7.19□□□□□ -1.26
UBR4-216ENST00000494503 FXYD4P59646 89 aa7.19□□□□□ -1.26
UBR4-216ENST00000494503 TIMM50Q3ZCQ8 353 aa7.19□□□□□ -1.26
UBR4-216ENST00000494503 CNIH2Q6PI25 160 aa7.19□□□□□ -1.26
UBR4-216ENST00000494503 Q6ZS49 121 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms