RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 MARCKSL1P49006 195 aa2.35□□□□□ -2.03
CMSS1-207ENST00000494412 CCL7P80098 99 aa2.35□□□□□ -2.03
CMSS1-207ENST00000494412 SPA17Q15506 151 aa2.35□□□□□ -2.03
CMSS1-207ENST00000494412 KRTAP25-1Q3LHN0 102 aa2.35□□□□□ -2.03
CMSS1-207ENST00000494412 KRTAP13-2Q52LG2 175 aa2.35□□□□□ -2.03
CMSS1-207ENST00000494412 PYCR3Q53H96 274 aa2.35□□□□□ -2.03
CMSS1-207ENST00000494412 IGFL1Q6UW32 110 aa2.35□□□□□ -2.03
CMSS1-207ENST00000494412 CALHM3Q86XJ0 350 aa2.35□□□□□ -2.03
CMSS1-207ENST00000494412 CLDN22Q8N7P3 220 aa2.35□□□□□ -2.03
CMSS1-207ENST00000494412 OR5P3Q8WZ94 311 aa2.35□□□□□ -2.03
CMSS1-207ENST00000494412 C1QTNF6Q9BXI9 259 aa2.35□□□□□ -2.03
CMSS1-207ENST00000494412 ABCG5Q9H222 651 aa2.35□□□□□ -2.03
CMSS1-207ENST00000494412 CXorf21Q9HAI6 301 aa2.35□□□□□ -2.03
CMSS1-207ENST00000494412 ASF1BQ9NVP2 202 aa2.35□□□□□ -2.03
CMSS1-207ENST00000494412 PRO0461Q9UI25 63 aa2.35□□□□□ -2.03
CMSS1-207ENST00000494412 PXMP4Q9Y6I8 212 aa2.35□□□□□ -2.03
CMSS1-207ENST00000494412 R4GN34 69 aa2.35□□□□□ -2.03
CMSS1-207ENST00000494412 DUOX2Q9NRD8 1548 aa2.35□□□□□ -2.03
CMSS1-207ENST00000494412 COL14A1Q05707 1796 aaKnown RBP2.35□□□□□ -2.03
CMSS1-207ENST00000494412 PAPPAQ13219 1627 aa2.35□□□□□ -2.03
CMSS1-207ENST00000494412 CACNA1DQ01668 2161 aa2.34□□□□□ -2.03
CMSS1-207ENST00000494412 CHD8Q9HCK8 2581 aa2.34□□□□□ -2.03
CMSS1-207ENST00000494412 VIRMAQ69YN4 1812 aaKnown RBP2.34□□□□□ -2.03
CMSS1-207ENST00000494412 DISC1C4P0D8 188 aa2.34□□□□□ -2.03
CMSS1-207ENST00000494412 FAM228BP0C875 321 aa2.34□□□□□ -2.03
CMSS1-207ENST00000494412 CCL1P22362 96 aa2.34□□□□□ -2.03
CMSS1-207ENST00000494412 OR4D2P58180 307 aa2.34□□□□□ -2.03
CMSS1-207ENST00000494412 TAS2R45P59539 299 aa2.34□□□□□ -2.03
CMSS1-207ENST00000494412 ERVS71-1P61550 626 aa2.34□□□□□ -2.03
CMSS1-207ENST00000494412 BTN3A2P78410 334 aa2.34□□□□□ -2.03
CMSS1-207ENST00000494412 ZNF141Q15928 474 aa2.34□□□□□ -2.03
CMSS1-207ENST00000494412 MRPL51Q4U2R6 128 aaKnown RBP2.34□□□□□ -2.03
CMSS1-207ENST00000494412 AKIRIN2Q53H80 203 aa2.34□□□□□ -2.03
CMSS1-207ENST00000494412 SPIN3Q5JUX0 258 aa2.34□□□□□ -2.03
CMSS1-207ENST00000494412 PRR9Q5T870 116 aa2.34□□□□□ -2.03
CMSS1-207ENST00000494412 NOXRED1Q6NXP6 359 aa2.34□□□□□ -2.03
CMSS1-207ENST00000494412 SCXQ7RTU7 201 aa2.34□□□□□ -2.03
CMSS1-207ENST00000494412 TMEM86BQ8N661 226 aa2.34□□□□□ -2.03
CMSS1-207ENST00000494412 OR5B17Q8NGF7 314 aa2.34□□□□□ -2.03
CMSS1-207ENST00000494412 OR2D3Q8NGH3 330 aa2.34□□□□□ -2.03
CMSS1-207ENST00000494412 OR4K13Q8NH42 304 aa2.34□□□□□ -2.03
CMSS1-207ENST00000494412 SLC35B4Q969S0 331 aa2.34□□□□□ -2.03
CMSS1-207ENST00000494412 C12orf43Q96C57 262 aaKnown RBP2.34□□□□□ -2.03
CMSS1-207ENST00000494412 PRAP1Q96NZ9 151 aa2.34□□□□□ -2.03
CMSS1-207ENST00000494412 FAM96AQ9H5X1 160 aa2.34□□□□□ -2.03
CMSS1-207ENST00000494412 IL20Q9NYY1 176 aa2.34□□□□□ -2.03
CMSS1-207ENST00000494412 HHLA2Q9UM44 414 aa2.34□□□□□ -2.03
CMSS1-207ENST00000494412 OTOFQ9HC10 1997 aa2.34□□□□□ -2.04
CMSS1-207ENST00000494412 MTUS2Q5JR59 1369 aa2.34□□□□□ -2.04
CMSS1-207ENST00000494412 TNS3Q68CZ2 1445 aa2.34□□□□□ -2.04
CMSS1-207ENST00000494412 KIAA1107Q9UPP5 1409 aa2.34□□□□□ -2.04
CMSS1-207ENST00000494412 SEC16AO15027 2179 aa2.33□□□□□ -2.04
CMSS1-207ENST00000494412 NLRC5Q86WI3 1866 aa2.33□□□□□ -2.04
CMSS1-207ENST00000494412 PHRF1Q9P1Y6 1649 aaKnown RBP2.33□□□□□ -2.04
CMSS1-207ENST00000494412 EIF2AK4Q9P2K8 1649 aaKnown RBP2.33□□□□□ -2.04
CMSS1-207ENST00000494412 NRXN3Q9Y4C0 1643 aa2.33□□□□□ -2.04
CMSS1-207ENST00000494412 A0A1W2PQ67 120 aa2.33□□□□□ -2.04
CMSS1-207ENST00000494412 EEF1E1-BLOC1S5C9J1V9 151 aa2.33□□□□□ -2.04
CMSS1-207ENST00000494412 APOMO95445 188 aa2.33□□□□□ -2.04
CMSS1-207ENST00000494412 ESDP10768 282 aa2.33□□□□□ -2.04
CMSS1-207ENST00000494412 S100A5P33763 92 aa2.33□□□□□ -2.04
CMSS1-207ENST00000494412 TSPEAR-AS2P59090 65 aa2.33□□□□□ -2.04
CMSS1-207ENST00000494412 IFITM2Q01629 132 aa2.33□□□□□ -2.04
CMSS1-207ENST00000494412 PMAIP1Q13794 54 aa2.33□□□□□ -2.04
CMSS1-207ENST00000494412 PLPPR5Q32ZL2 321 aa2.33□□□□□ -2.04
CMSS1-207ENST00000494412 FAM201AQ5SY85 155 aa2.33□□□□□ -2.04
CMSS1-207ENST00000494412 AMMECR1LQ6DCA0 310 aa2.33□□□□□ -2.04
CMSS1-207ENST00000494412 C5orf46Q6UWT4 87 aa2.33□□□□□ -2.04
CMSS1-207ENST00000494412 CCDC121Q6ZUS5 278 aa2.33□□□□□ -2.04
CMSS1-207ENST00000494412 LYPD6Q86Y78 171 aa2.33□□□□□ -2.04
CMSS1-207ENST00000494412 ZNF561Q8N587 486 aa2.33□□□□□ -2.04
CMSS1-207ENST00000494412 DEFB125Q8N687 156 aa2.33□□□□□ -2.04
CMSS1-207ENST00000494412 PACRGLQ8N7B6 248 aa2.33□□□□□ -2.04
CMSS1-207ENST00000494412 OR1L8Q8NGR8 309 aa2.33□□□□□ -2.04
CMSS1-207ENST00000494412 CPNE2Q96FN4 548 aaPredicted RBP2.33□□□□□ -2.04
CMSS1-207ENST00000494412 IGF2BP2-AS1Q96M15 143 aa2.33□□□□□ -2.04
CMSS1-207ENST00000494412 MGLLQ99685 303 aa2.33□□□□□ -2.04
CMSS1-207ENST00000494412 NKX6-2Q9C056 277 aaPredicted RBP2.33□□□□□ -2.04
CMSS1-207ENST00000494412 ANAPC10Q9UM13 185 aa2.33□□□□□ -2.04
CMSS1-207ENST00000494412 SNX12Q9UMY4 172 aa2.33□□□□□ -2.04
CMSS1-207ENST00000494412 ZNF337Q9Y3M9 751 aa2.33□□□□□ -2.04
CMSS1-207ENST00000494412 GCC2Q8IWJ2 1684 aa2.33□□□□□ -2.04
CMSS1-207ENST00000494412 PEAK1Q9H792 1746 aa2.33□□□□□ -2.04
CMSS1-207ENST00000494412 FMN2Q9NZ56 1722 aa2.33□□□□□ -2.04
CMSS1-207ENST00000494412 BRCA2P51587 3418 aa2.33□□□□□ -2.04
CMSS1-207ENST00000494412 SBF2Q86WG5 1849 aa2.33□□□□□ -2.04
CMSS1-207ENST00000494412 CCDC144AA2RUR9 1427 aa2.33□□□□□ -2.04
CMSS1-207ENST00000494412 CACNA1SQ13698 1873 aa2.33□□□□□ -2.04
CMSS1-207ENST00000494412 CASP8AP2Q9UKL3 1982 aa2.32□□□□□ -2.04
CMSS1-207ENST00000494412 COL24A1Q17RW2 1714 aa2.32□□□□□ -2.04
CMSS1-207ENST00000494412 PARP4Q9UKK3 1724 aaKnown RBP2.32□□□□□ -2.04
CMSS1-207ENST00000494412 LAMB4A4D0S4 1761 aa2.32□□□□□ -2.04
CMSS1-207ENST00000494412 A0A1W2PNU3 283 aaPredicted RBP2.32□□□□□ -2.04
CMSS1-207ENST00000494412 OR6C6A6NF89 314 aa2.32□□□□□ -2.04
CMSS1-207ENST00000494412 SMIM9A6NGZ8 99 aa2.32□□□□□ -2.04
CMSS1-207ENST00000494412 OR4C45A6NMZ5 311 aa2.32□□□□□ -2.04
CMSS1-207ENST00000494412 CHP2O43745 196 aa2.32□□□□□ -2.04
CMSS1-207ENST00000494412 PRB2P02812 416 aaPredicted RBP2.32□□□□□ -2.04
CMSS1-207ENST00000494412 OR5G3P0C626 314 aa2.32□□□□□ -2.04
CMSS1-207ENST00000494412 IGHV3-30-3P0DP02 117 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms