RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 TSNAXQ99598 290 aaKnown RBP6.25□□□□□ -1.41
RIF1-211ENST00000494333 CABLES2Q9BTV7 478 aa6.25□□□□□ -1.41
RIF1-211ENST00000494333 CENPOQ9BU64 300 aa6.25□□□□□ -1.41
RIF1-211ENST00000494333 ST6GALNAC5Q9BVH7 336 aa6.25□□□□□ -1.41
RIF1-211ENST00000494333 SLC35D1Q9NTN3 355 aa6.25□□□□□ -1.41
RIF1-211ENST00000494333 SDHAF2Q9NX18 166 aa6.25□□□□□ -1.41
RIF1-211ENST00000494333 FOXA2Q9Y261 457 aaPredicted RBP6.25□□□□□ -1.41
RIF1-211ENST00000494333 RRP15Q9Y3B9 282 aaKnown RBP6.25□□□□□ -1.41
RIF1-211ENST00000494333 TGP01266 2768 aa6.25□□□□□ -1.41
RIF1-211ENST00000494333 CMYA5Q8N3K9 4069 aa6.24□□□□□ -1.41
RIF1-211ENST00000494333 J3QRK9 145 aa6.24□□□□□ -1.41
RIF1-211ENST00000494333 CNIH1O95406 144 aa6.24□□□□□ -1.41
RIF1-211ENST00000494333 DIRAS3O95661 229 aa6.24□□□□□ -1.41
RIF1-211ENST00000494333 OR8U8P0C7N1 319 aa6.24□□□□□ -1.41
RIF1-211ENST00000494333 CD40LGP29965 261 aa6.24□□□□□ -1.41
RIF1-211ENST00000494333 SDC2P34741 201 aa6.24□□□□□ -1.41
RIF1-211ENST00000494333 LGALS7P47929 136 aa6.24□□□□□ -1.41
RIF1-211ENST00000494333 CRIP2P52943 208 aaPredicted RBP6.24□□□□□ -1.41
RIF1-211ENST00000494333 GNB1P62873 340 aa6.24□□□□□ -1.41
RIF1-211ENST00000494333 RUNX1Q01196 453 aa6.24□□□□□ -1.41
RIF1-211ENST00000494333 MXD1Q05195 221 aa6.24□□□□□ -1.41
RIF1-211ENST00000494333 FXYD3Q14802 87 aa6.24□□□□□ -1.41
RIF1-211ENST00000494333 HACD4Q5VWC8 232 aa6.24□□□□□ -1.41
RIF1-211ENST00000494333 ZNF773Q6PK81 442 aa6.24□□□□□ -1.41
RIF1-211ENST00000494333 TCTEX1D1Q8N7M0 179 aa6.24□□□□□ -1.41
RIF1-211ENST00000494333 ALX4Q9H161 411 aaPredicted RBP6.24□□□□□ -1.41
RIF1-211ENST00000494333 RNF167Q9H6Y7 350 aa6.24□□□□□ -1.41
RIF1-211ENST00000494333 ZNF355PQ9NSJ1 428 aa6.24□□□□□ -1.41
RIF1-211ENST00000494333 LOC100506127A0A0U1RQW1 187 aa6.23□□□□□ -1.41
RIF1-211ENST00000494333 TMEM235A6NFC5 223 aa6.23□□□□□ -1.41
RIF1-211ENST00000494333 SRRM4A7MD48 611 aaKnown RBP6.23□□□□□ -1.41
RIF1-211ENST00000494333 ARPC1BO15143 372 aaKnown RBP6.23□□□□□ -1.41
RIF1-211ENST00000494333 IGLV2-23P01705 113 aa6.23□□□□□ -1.41
RIF1-211ENST00000494333 IGHV3-11P01762 117 aa6.23□□□□□ -1.41
RIF1-211ENST00000494333 CTXN2P0C2S0 81 aa6.23□□□□□ -1.41
RIF1-211ENST00000494333 CD36P16671 472 aa6.23□□□□□ -1.41
RIF1-211ENST00000494333 DTYMKP23919 212 aa6.23□□□□□ -1.41
RIF1-211ENST00000494333 SSBP2P81877 361 aaPredicted RBP6.23□□□□□ -1.41
RIF1-211ENST00000494333 PITPNAQ00169 270 aa6.23□□□□□ -1.41
RIF1-211ENST00000494333 PJVKQ0ZLH3 352 aa6.23□□□□□ -1.41
RIF1-211ENST00000494333 CBX3Q13185 183 aa6.23□□□□□ -1.41
RIF1-211ENST00000494333 NEDD8Q15843 81 aa6.23□□□□□ -1.41
RIF1-211ENST00000494333 RTL8BQ17RB0 113 aa6.23□□□□□ -1.41
RIF1-211ENST00000494333 IDNKQ5T6J7 187 aa6.23□□□□□ -1.41
RIF1-211ENST00000494333 ASPHD1Q5U4P2 390 aa6.23□□□□□ -1.41
RIF1-211ENST00000494333 PYHIN1Q6K0P9 492 aa6.23□□□□□ -1.41
RIF1-211ENST00000494333 SFXN4Q6P4A7 337 aa6.23□□□□□ -1.41
RIF1-211ENST00000494333 Q6ZS49 121 aa6.23□□□□□ -1.41
RIF1-211ENST00000494333 H1FOOQ8IZA3 346 aaPredicted RBP6.23□□□□□ -1.41
RIF1-211ENST00000494333 OR5T1Q8NG75 326 aa6.23□□□□□ -1.41
RIF1-211ENST00000494333 GRPEL2Q8TAA5 225 aa6.23□□□□□ -1.41
RIF1-211ENST00000494333 LGALS14Q8TCE9 139 aa6.23□□□□□ -1.41
RIF1-211ENST00000494333 DCUN1D4Q92564 292 aa6.23□□□□□ -1.41
RIF1-211ENST00000494333 ARPC1AQ92747 370 aa6.23□□□□□ -1.41
RIF1-211ENST00000494333 DLX4Q92988 240 aaPredicted RBP6.23□□□□□ -1.41
RIF1-211ENST00000494333 C5orf30Q96GV9 206 aa6.23□□□□□ -1.41
RIF1-211ENST00000494333 HARBI1Q96MB7 349 aa6.23□□□□□ -1.41
RIF1-211ENST00000494333 DCSTAMPQ9H295 470 aa6.23□□□□□ -1.41
RIF1-211ENST00000494333 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.23□□□□□ -1.41
RIF1-211ENST00000494333 IGHV4OR15-8A0A075B7B6 117 aa6.22□□□□□ -1.41
RIF1-211ENST00000494333 A0A087WW49 117 aa6.22□□□□□ -1.41
RIF1-211ENST00000494333 LINC01619G3V211 115 aa6.22□□□□□ -1.41
RIF1-211ENST00000494333 OVOL1O14753 267 aa6.22□□□□□ -1.41
RIF1-211ENST00000494333 SCGNO76038 276 aa6.22□□□□□ -1.41
RIF1-211ENST00000494333 TRGV3P03979 118 aa6.22□□□□□ -1.41
RIF1-211ENST00000494333 CRYGBP07316 175 aa6.22□□□□□ -1.41
RIF1-211ENST00000494333 LGALS1P09382 135 aaKnown RBP6.22□□□□□ -1.41
RIF1-211ENST00000494333 RRASP10301 218 aa6.22□□□□□ -1.41
RIF1-211ENST00000494333 NFYAP23511 347 aaPredicted RBP6.22□□□□□ -1.41
RIF1-211ENST00000494333 DUTP33316 252 aaKnown RBP6.22□□□□□ -1.41
RIF1-211ENST00000494333 INSL3P51460 131 aa6.22□□□□□ -1.41
RIF1-211ENST00000494333 TPPP2P59282 170 aa6.22□□□□□ -1.41
RIF1-211ENST00000494333 GNG2P59768 71 aa6.22□□□□□ -1.41
RIF1-211ENST00000494333 DCTN2Q13561 401 aaKnown RBP6.22□□□□□ -1.41
RIF1-211ENST00000494333 VAX1Q5SQQ9 334 aa6.22□□□□□ -1.41
RIF1-211ENST00000494333 CNIH2Q6PI25 160 aa6.22□□□□□ -1.41
RIF1-211ENST00000494333 OR5H6Q8NGV6 325 aa6.22□□□□□ -1.41
RIF1-211ENST00000494333 NUDCD2Q8WVJ2 157 aa6.22□□□□□ -1.41
RIF1-211ENST00000494333 ADTRPQ96IZ2 230 aa6.22□□□□□ -1.41
RIF1-211ENST00000494333 DCUN1D5Q9BTE7 237 aa6.22□□□□□ -1.41
RIF1-211ENST00000494333 SLA2Q9H6Q3 261 aa6.22□□□□□ -1.41
RIF1-211ENST00000494333 RHBDL2Q9NX52 303 aa6.22□□□□□ -1.41
RIF1-211ENST00000494333 OR2W1Q9Y3N9 320 aa6.22□□□□□ -1.41
RIF1-211ENST00000494333 PRKDCP78527 4128 aaKnown RBP6.22□□□□□ -1.41
RIF1-211ENST00000494333 TRAV18A0A075B6X5 111 aa6.21□□□□□ -1.42
RIF1-211ENST00000494333 MSGN1A6NI15 193 aa6.21□□□□□ -1.42
RIF1-211ENST00000494333 SSX5O60225 188 aa6.21□□□□□ -1.42
RIF1-211ENST00000494333 SAP30O75446 220 aa6.21□□□□□ -1.42
RIF1-211ENST00000494333 CRYZL1O95825 349 aa6.21□□□□□ -1.42
RIF1-211ENST00000494333 HLA-DQB1P01920 261 aa6.21□□□□□ -1.42
RIF1-211ENST00000494333 HSPB1P04792 205 aaKnown RBP6.21□□□□□ -1.42
RIF1-211ENST00000494333 APELAP0DMC3 54 aa6.21□□□□□ -1.42
RIF1-211ENST00000494333 VMA21Q3ZAQ7 101 aa6.21□□□□□ -1.42
RIF1-211ENST00000494333 KCTD21Q4G0X4 260 aa6.21□□□□□ -1.42
RIF1-211ENST00000494333 C11orf87Q6NUJ2 197 aa6.21□□□□□ -1.42
RIF1-211ENST00000494333 IDO2Q6ZQW0 420 aa6.21□□□□□ -1.42
RIF1-211ENST00000494333 ZNF429Q86V71 674 aa6.21□□□□□ -1.42
RIF1-211ENST00000494333 ZNF645Q8N7E2 425 aa6.21□□□□□ -1.42
RIF1-211ENST00000494333 TEX45Q8NA69 505 aa6.21□□□□□ -1.42
RIF1-211ENST00000494333 TMEM68Q96MH6 324 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms