RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 CSN3P07498 182 aa10.2□□□□□ -0.78
CTDSP1-212ENST00000494067 RPL27AP46776 148 aaKnown RBP10.2□□□□□ -0.78
CTDSP1-212ENST00000494067 BEST4Q8NFU0 473 aa10.2□□□□□ -0.78
CTDSP1-212ENST00000494067 FYTTD1Q96QD9 318 aaKnown RBP10.2□□□□□ -0.78
CTDSP1-212ENST00000494067 SPATA25Q9BR10 227 aa10.2□□□□□ -0.78
CTDSP1-212ENST00000494067 TM2D3Q9BRN9 247 aa10.2□□□□□ -0.78
CTDSP1-212ENST00000494067 C19orf73Q9NVV2 129 aa10.2□□□□□ -0.78
CTDSP1-212ENST00000494067 TAS2R8Q9NYW2 309 aa10.2□□□□□ -0.78
CTDSP1-212ENST00000494067 STAB2Q8WWQ8 2551 aa10.2□□□□□ -0.78
CTDSP1-212ENST00000494067 SORL1Q92673 2214 aa10.19□□□□□ -0.78
CTDSP1-212ENST00000494067 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.19□□□□□ -0.78
CTDSP1-212ENST00000494067 TRBV9A0A0B4J1U6 114 aa10.19□□□□□ -0.78
CTDSP1-212ENST00000494067 LOC100506127A0A0U1RQW1 187 aa10.19□□□□□ -0.78
CTDSP1-212ENST00000494067 TMEM127O75204 238 aa10.19□□□□□ -0.78
CTDSP1-212ENST00000494067 GGCTO75223 188 aaKnown RBP10.19□□□□□ -0.78
CTDSP1-212ENST00000494067 OR2J3O76001 311 aa10.19□□□□□ -0.78
CTDSP1-212ENST00000494067 KBTBD11O94819 623 aa10.19□□□□□ -0.78
CTDSP1-212ENST00000494067 IFNA6P05013 189 aa10.19□□□□□ -0.78
CTDSP1-212ENST00000494067 FCER2P06734 321 aa10.19□□□□□ -0.78
CTDSP1-212ENST00000494067 DEFA4P12838 97 aa10.19□□□□□ -0.78
CTDSP1-212ENST00000494067 MYOD1P15172 320 aa10.19□□□□□ -0.78
CTDSP1-212ENST00000494067 HIST1H1BP16401 226 aaKnown RBP10.19□□□□□ -0.78
CTDSP1-212ENST00000494067 EDN2P20800 178 aa10.19□□□□□ -0.78
CTDSP1-212ENST00000494067 FCGR2CP31995 323 aa10.19□□□□□ -0.78
CTDSP1-212ENST00000494067 CBX5P45973 191 aa10.19□□□□□ -0.78
CTDSP1-212ENST00000494067 CATR1Q13166 79 aa10.19□□□□□ -0.78
CTDSP1-212ENST00000494067 NEDD8Q15843 81 aa10.19□□□□□ -0.78
CTDSP1-212ENST00000494067 C15orf32Q32M92 178 aa10.19□□□□□ -0.78
CTDSP1-212ENST00000494067 CASC10Q5T4H9 136 aa10.19□□□□□ -0.78
CTDSP1-212ENST00000494067 ZBTB34Q8NCN2 500 aa10.19□□□□□ -0.78
CTDSP1-212ENST00000494067 OR4A5Q8NH83 315 aa10.19□□□□□ -0.78
CTDSP1-212ENST00000494067 TMEM167AQ8TBQ9 72 aa10.19□□□□□ -0.78
CTDSP1-212ENST00000494067 SECTM1Q8WVN6 248 aa10.19□□□□□ -0.78
CTDSP1-212ENST00000494067 ISOC1Q96CN7 298 aa10.19□□□□□ -0.78
CTDSP1-212ENST00000494067 CITED4Q96RK1 184 aa10.19□□□□□ -0.78
CTDSP1-212ENST00000494067 SLC2A8Q9NY64 477 aa10.19□□□□□ -0.78
CTDSP1-212ENST00000494067 FBXL7Q9UJT9 491 aa10.19□□□□□ -0.78
CTDSP1-212ENST00000494067 HMX3A6NHT5 357 aa10.18□□□□□ -0.78
CTDSP1-212ENST00000494067 NPIPB5A8MRT5 1133 aa10.18□□□□□ -0.78
CTDSP1-212ENST00000494067 TEX22C9J3V5 150 aa10.18□□□□□ -0.78
CTDSP1-212ENST00000494067 MSMO1Q15800 293 aa10.18□□□□□ -0.78
CTDSP1-212ENST00000494067 ADAMTSL5Q6ZMM2 481 aa10.18□□□□□ -0.78
CTDSP1-212ENST00000494067 HOGA1Q86XE5 327 aa10.18□□□□□ -0.78
CTDSP1-212ENST00000494067 LAX1Q8IWV1 398 aa10.18□□□□□ -0.78
CTDSP1-212ENST00000494067 OR13F1Q8NGS4 319 aa10.18□□□□□ -0.78
CTDSP1-212ENST00000494067 BORCS5Q969J3 196 aa10.18□□□□□ -0.78
CTDSP1-212ENST00000494067 HRASLSQ9HDD0 168 aa10.18□□□□□ -0.78
CTDSP1-212ENST00000494067 SLC2A9Q9NRM0 540 aa10.18□□□□□ -0.78
CTDSP1-212ENST00000494067 DMRT1Q9Y5R6 373 aa10.18□□□□□ -0.78
CTDSP1-212ENST00000494067 DYNC2H1Q8NCM8 4307 aaKnown RBP10.17□□□□□ -0.78
CTDSP1-212ENST00000494067 CSMD3Q7Z407 3707 aa10.17□□□□□ -0.78
CTDSP1-212ENST00000494067 IZUMO1RA6ND01 250 aa10.17□□□□□ -0.78
CTDSP1-212ENST00000494067 CGB1A6NKQ9 187 aa10.17□□□□□ -0.78
CTDSP1-212ENST00000494067 BMPR1BO00238 502 aa10.17□□□□□ -0.78
CTDSP1-212ENST00000494067 CYB5BO43169 146 aa10.17□□□□□ -0.78
CTDSP1-212ENST00000494067 TNFSF12O43508 249 aa10.17□□□□□ -0.78
CTDSP1-212ENST00000494067 TPPPO94811 219 aa10.17□□□□□ -0.78
CTDSP1-212ENST00000494067 PPYP01298 95 aa10.17□□□□□ -0.78
CTDSP1-212ENST00000494067 IL6RP08887 468 aaPredicted RBP10.17□□□□□ -0.78
CTDSP1-212ENST00000494067 RPL8P62917 257 aaKnown RBP10.17□□□□□ -0.78
CTDSP1-212ENST00000494067 TIMM50Q3ZCQ8 353 aa10.17□□□□□ -0.78
CTDSP1-212ENST00000494067 SSX9Q7RTT3 188 aa10.17□□□□□ -0.78
CTDSP1-212ENST00000494067 CROCCP3Q8IVE0 287 aa10.17□□□□□ -0.78
CTDSP1-212ENST00000494067 SPAG16Q8N0X2 631 aa10.17□□□□□ -0.78
CTDSP1-212ENST00000494067 PUSL1Q8N0Z8 303 aaKnown RBP10.17□□□□□ -0.78
CTDSP1-212ENST00000494067 CD300LFQ8TDQ1 290 aa10.17□□□□□ -0.78
CTDSP1-212ENST00000494067 EEF1AKMT3Q96AZ1 226 aa10.17□□□□□ -0.78
CTDSP1-212ENST00000494067 THAP7Q9BT49 309 aaPredicted RBP10.17□□□□□ -0.78
CTDSP1-212ENST00000494067 SLC5A7Q9GZV3 580 aa10.17□□□□□ -0.78
CTDSP1-212ENST00000494067 IFT46Q9NQC8 304 aa10.17□□□□□ -0.78
CTDSP1-212ENST00000494067 CCL28Q9NRJ3 127 aa10.17□□□□□ -0.78
CTDSP1-212ENST00000494067 MEIS3P1A6NDR6 274 aa10.16□□□□□ -0.78
CTDSP1-212ENST00000494067 HPRT1P00492 218 aa10.16□□□□□ -0.78
CTDSP1-212ENST00000494067 ZNF735P0CB33 412 aa10.16□□□□□ -0.78
CTDSP1-212ENST00000494067 PSMB6P28072 239 aa10.16□□□□□ -0.78
CTDSP1-212ENST00000494067 ARL3P36405 182 aa10.16□□□□□ -0.78
CTDSP1-212ENST00000494067 FXYD4P59646 89 aa10.16□□□□□ -0.78
CTDSP1-212ENST00000494067 CD81P60033 236 aa10.16□□□□□ -0.78
CTDSP1-212ENST00000494067 FAM106AQ4KMX7 169 aa10.16□□□□□ -0.78
CTDSP1-212ENST00000494067 S100A16Q96FQ6 103 aaKnown RBP10.16□□□□□ -0.78
CTDSP1-212ENST00000494067 AUNIPQ9H7T9 357 aa10.16□□□□□ -0.78
CTDSP1-212ENST00000494067 BET1LQ9NYM9 111 aa10.16□□□□□ -0.78
CTDSP1-212ENST00000494067 TECRQ9NZ01 308 aaKnown RBP10.16□□□□□ -0.78
CTDSP1-212ENST00000494067 THYN1Q9P016 225 aa10.16□□□□□ -0.78
CTDSP1-212ENST00000494067 TRBV7-1A0A0A6YYK4 115 aa10.15□□□□□ -0.78
CTDSP1-212ENST00000494067 ZNF320A2RRD8 509 aa10.15□□□□□ -0.78
CTDSP1-212ENST00000494067 LGALS9O00182 355 aa10.15□□□□□ -0.78
CTDSP1-212ENST00000494067 RBFOX2O43251 390 aaKnown RBP eCLIP10.15□□□□□ -0.78
CTDSP1-212ENST00000494067 OR2C1O95371 312 aa10.15□□□□□ -0.78
CTDSP1-212ENST00000494067 CRYGCP07315 174 aa10.15□□□□□ -0.78
CTDSP1-212ENST00000494067 NQO2P16083 231 aa10.15□□□□□ -0.78
CTDSP1-212ENST00000494067 HLA-GP17693 338 aa10.15□□□□□ -0.78
CTDSP1-212ENST00000494067 MECP2P51608 486 aaKnown RBP10.15□□□□□ -0.78
CTDSP1-212ENST00000494067 TAS2R31P59538 309 aa10.15□□□□□ -0.78
CTDSP1-212ENST00000494067 HERV-K104P61576 105 aa10.15□□□□□ -0.78
CTDSP1-212ENST00000494067 GUCA2BQ16661 112 aa10.15□□□□□ -0.78
CTDSP1-212ENST00000494067 HAGHQ16775 308 aa10.15□□□□□ -0.78
CTDSP1-212ENST00000494067 CD300EQ496F6 205 aaPredicted RBP10.15□□□□□ -0.78
CTDSP1-212ENST00000494067 KCTD21Q4G0X4 260 aa10.15□□□□□ -0.78
CTDSP1-212ENST00000494067 OR4A47Q6IF82 309 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms