RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 VBP1P61758 197 aa8.18□□□□□ -1.1
COL6A3-214ENST00000493608 CDK10Q15131 360 aa8.18□□□□□ -1.1
COL6A3-214ENST00000493608 UBE2NLQ5JXB2 153 aa8.18□□□□□ -1.1
COL6A3-214ENST00000493608 VAX1Q5SQQ9 334 aa8.18□□□□□ -1.1
COL6A3-214ENST00000493608 OVCH2Q7RTZ1 564 aa8.18□□□□□ -1.1
COL6A3-214ENST00000493608 ADAD2Q8NCV1 583 aaKnown RBP8.18□□□□□ -1.1
COL6A3-214ENST00000493608 OR13F1Q8NGS4 319 aa8.18□□□□□ -1.1
COL6A3-214ENST00000493608 TMEM68Q96MH6 324 aa8.18□□□□□ -1.1
COL6A3-214ENST00000493608 HSD17B10Q99714 261 aaKnown RBP8.18□□□□□ -1.1
COL6A3-214ENST00000493608 FUNDC2Q9BWH2 189 aa8.18□□□□□ -1.1
COL6A3-214ENST00000493608 SLC5A7Q9GZV3 580 aa8.18□□□□□ -1.1
COL6A3-214ENST00000493608 IFT46Q9NQC8 304 aa8.18□□□□□ -1.1
COL6A3-214ENST00000493608 COMMD3Q9UBI1 195 aa8.18□□□□□ -1.1
COL6A3-214ENST00000493608 MRPS7Q9Y2R9 242 aaKnown RBP8.18□□□□□ -1.1
COL6A3-214ENST00000493608 E7EUB6 86 aa8.17□□□□□ -1.1
COL6A3-214ENST00000493608 ACTL6BO94805 426 aa8.17□□□□□ -1.1
COL6A3-214ENST00000493608 OR2A4O95047 310 aa8.17□□□□□ -1.1
COL6A3-214ENST00000493608 PMP2P02689 132 aa8.17□□□□□ -1.1
COL6A3-214ENST00000493608 EIF4EP06730 217 aaKnown RBP8.17□□□□□ -1.1
COL6A3-214ENST00000493608 OR9G9P0C7N8 305 aa8.17□□□□□ -1.1
COL6A3-214ENST00000493608 MYOD1P15172 320 aa8.17□□□□□ -1.1
COL6A3-214ENST00000493608 CBX5P45973 191 aa8.17□□□□□ -1.1
COL6A3-214ENST00000493608 RFX2P48378 723 aa8.17□□□□□ -1.1
COL6A3-214ENST00000493608 TAS2R20P59543 309 aa8.17□□□□□ -1.1
COL6A3-214ENST00000493608 ZNF45Q02386 682 aa8.17□□□□□ -1.1
COL6A3-214ENST00000493608 DYRK1AQ13627 763 aa8.17□□□□□ -1.1
COL6A3-214ENST00000493608 TMEM69Q5SWH9 247 aa8.17□□□□□ -1.1
COL6A3-214ENST00000493608 LCE1DQ5T752 114 aa8.17□□□□□ -1.1
COL6A3-214ENST00000493608 ZNF66Q6ZN08 573 aa8.17□□□□□ -1.1
COL6A3-214ENST00000493608 C19orf35Q6ZS72 473 aa8.17□□□□□ -1.1
COL6A3-214ENST00000493608 TMEM17Q86X19 198 aa8.17□□□□□ -1.1
COL6A3-214ENST00000493608 CROCCP3Q8IVE0 287 aa8.17□□□□□ -1.1
COL6A3-214ENST00000493608 MMD2Q8IY49 270 aa8.17□□□□□ -1.1
COL6A3-214ENST00000493608 OR5AP2Q8NGF4 316 aa8.17□□□□□ -1.1
COL6A3-214ENST00000493608 OR4S2Q8NH73 311 aa8.17□□□□□ -1.1
COL6A3-214ENST00000493608 FYTTD1Q96QD9 318 aaKnown RBP8.17□□□□□ -1.1
COL6A3-214ENST00000493608 OR2A7Q96R45 310 aa8.17□□□□□ -1.1
COL6A3-214ENST00000493608 OR4C12Q96R67 309 aa8.17□□□□□ -1.1
COL6A3-214ENST00000493608 RSRP1Q9BUV0 290 aa8.17□□□□□ -1.1
COL6A3-214ENST00000493608 RANGRFQ9HD47 186 aaPredicted RBP8.17□□□□□ -1.1
COL6A3-214ENST00000493608 PEF1Q9UBV8 284 aaKnown RBP8.17□□□□□ -1.1
COL6A3-214ENST00000493608 SULT1C2O00338 296 aa8.16□□□□□ -1.1
COL6A3-214ENST00000493608 KBTBD11O94819 623 aa8.16□□□□□ -1.1
COL6A3-214ENST00000493608 IL6RP08887 468 aaPredicted RBP8.16□□□□□ -1.1
COL6A3-214ENST00000493608 RPA2P15927 270 aa8.16□□□□□ -1.1
COL6A3-214ENST00000493608 SYNJ2BPP57105 145 aa8.16□□□□□ -1.1
COL6A3-214ENST00000493608 DCTN2Q13561 401 aaKnown RBP8.16□□□□□ -1.1
COL6A3-214ENST00000493608 ZNF343Q6P1L6 599 aa8.16□□□□□ -1.1
COL6A3-214ENST00000493608 ZNF818PQ6ZRF7 136 aa8.16□□□□□ -1.1
COL6A3-214ENST00000493608 SPAG16Q8N0X2 631 aa8.16□□□□□ -1.1
COL6A3-214ENST00000493608 PUSL1Q8N0Z8 303 aaKnown RBP8.16□□□□□ -1.1
COL6A3-214ENST00000493608 GIMAP1Q8WWP7 306 aa8.16□□□□□ -1.1
COL6A3-214ENST00000493608 SLC25A46Q96AG3 418 aa8.16□□□□□ -1.1
COL6A3-214ENST00000493608 NAA50Q9GZZ1 169 aaKnown RBP8.16□□□□□ -1.1
COL6A3-214ENST00000493608 AKIP1Q9NQ31 210 aa8.16□□□□□ -1.1
COL6A3-214ENST00000493608 EHFQ9NZC4 300 aa8.16□□□□□ -1.1
COL6A3-214ENST00000493608 TRAV3A0A0B4J244 114 aa8.15□□□□□ -1.1
COL6A3-214ENST00000493608 A0A1B0GW64 132 aa8.15□□□□□ -1.1
COL6A3-214ENST00000493608 TRIM64CA6NLI5 447 aa8.15□□□□□ -1.1
COL6A3-214ENST00000493608 TEX22C9J3V5 150 aa8.15□□□□□ -1.1
COL6A3-214ENST00000493608 CREBL2O60519 120 aaPredicted RBP8.15□□□□□ -1.1
COL6A3-214ENST00000493608 TMEM127O75204 238 aa8.15□□□□□ -1.1
COL6A3-214ENST00000493608 OR2J3O76001 311 aa8.15□□□□□ -1.1
COL6A3-214ENST00000493608 REG1AP05451 166 aa8.15□□□□□ -1.1
COL6A3-214ENST00000493608 GP9P14770 177 aa8.15□□□□□ -1.1
COL6A3-214ENST00000493608 ZP3P21754 424 aa8.15□□□□□ -1.1
COL6A3-214ENST00000493608 HLA-DMAP28067 261 aa8.15□□□□□ -1.1
COL6A3-214ENST00000493608 GNRHRP30968 328 aa8.15□□□□□ -1.1
COL6A3-214ENST00000493608 PRSS3P35030 304 aa8.15□□□□□ -1.1
COL6A3-214ENST00000493608 RPL27AP46776 148 aaKnown RBP8.15□□□□□ -1.1
COL6A3-214ENST00000493608 RHOGP84095 191 aa8.15□□□□□ -1.1
COL6A3-214ENST00000493608 ATP5G2Q06055 141 aa8.15□□□□□ -1.1
COL6A3-214ENST00000493608 KLF5Q13887 457 aaPredicted RBP8.15□□□□□ -1.1
COL6A3-214ENST00000493608 TTC9CQ8N5M4 171 aa8.15□□□□□ -1.1
COL6A3-214ENST00000493608 OR51H1Q8NH63 302 aa8.15□□□□□ -1.1
COL6A3-214ENST00000493608 TMEM167AQ8TBQ9 72 aa8.15□□□□□ -1.1
COL6A3-214ENST00000493608 USMG5Q96IX5 58 aa8.15□□□□□ -1.1
COL6A3-214ENST00000493608 SPIN2AQ99865 258 aa8.15□□□□□ -1.1
COL6A3-214ENST00000493608 SPIN2BQ9BPZ2 258 aa8.15□□□□□ -1.1
COL6A3-214ENST00000493608 ZNF2Q9BSG1 426 aaPredicted RBP8.15□□□□□ -1.1
COL6A3-214ENST00000493608 ELOVL1Q9BW60 279 aa8.15□□□□□ -1.1
COL6A3-214ENST00000493608 S4R3C0 116 aa8.15□□□□□ -1.1
COL6A3-214ENST00000493608 TRBV9A0A0B4J1U6 114 aa8.14□□□□□ -1.11
COL6A3-214ENST00000493608 HPGDSO60760 199 aa8.14□□□□□ -1.11
COL6A3-214ENST00000493608 BRI3O95415 125 aa8.14□□□□□ -1.11
COL6A3-214ENST00000493608 HRASP01112 189 aa8.14□□□□□ -1.11
COL6A3-214ENST00000493608 IGHV3-23P01764 117 aa8.14□□□□□ -1.11
COL6A3-214ENST00000493608 AREGP15514 252 aa8.14□□□□□ -1.11
COL6A3-214ENST00000493608 KIR2DS2P43631 304 aa8.14□□□□□ -1.11
COL6A3-214ENST00000493608 HERV-K104P61576 105 aa8.14□□□□□ -1.11
COL6A3-214ENST00000493608 EXOSC2Q13868 293 aaKnown RBP8.14□□□□□ -1.11
COL6A3-214ENST00000493608 RPEL1Q2QD12 228 aa8.14□□□□□ -1.11
COL6A3-214ENST00000493608 AADACL3Q5VUY0 350 aa8.14□□□□□ -1.11
COL6A3-214ENST00000493608 OR4A47Q6IF82 309 aa8.14□□□□□ -1.11
COL6A3-214ENST00000493608 ANKRD13BQ86YJ7 626 aa8.14□□□□□ -1.11
COL6A3-214ENST00000493608 SNX29P2Q8IUI4 249 aa8.14□□□□□ -1.11
COL6A3-214ENST00000493608 LYSMD2Q8IV50 215 aa8.14□□□□□ -1.11
COL6A3-214ENST00000493608 ZBTB34Q8NCN2 500 aa8.14□□□□□ -1.11
COL6A3-214ENST00000493608 OR9G4Q8NGQ1 327 aa8.14□□□□□ -1.11
COL6A3-214ENST00000493608 OR6Q1Q8NGQ2 317 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms