RNA–Protein interactions for RNA: ENST00000493199.1

NEK4-205, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 355 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-205ENST00000493199 TMEM65Q6PI78 240 aa4.3□□□□□ -1.72
NEK4-205ENST00000493199 ZNF562Q6V9R5 426 aa4.3□□□□□ -1.72
NEK4-205ENST00000493199 LHFPL4Q7Z7J7 247 aa4.3□□□□□ -1.72
NEK4-205ENST00000493199 S100A7AQ86SG5 101 aa4.3□□□□□ -1.72
NEK4-205ENST00000493199 ZNF429Q86V71 674 aa4.3□□□□□ -1.72
NEK4-205ENST00000493199 KRTAP1-3Q8IUG1 177 aa4.3□□□□□ -1.72
NEK4-205ENST00000493199 ODF3L1Q8IXM7 274 aa4.3□□□□□ -1.72
NEK4-205ENST00000493199 INO80EQ8NBZ0 244 aaPredicted RBP4.3□□□□□ -1.72
NEK4-205ENST00000493199 ADAD2Q8NCV1 583 aaKnown RBP4.3□□□□□ -1.72
NEK4-205ENST00000493199 NPBQ8NG41 125 aa4.3□□□□□ -1.72
NEK4-205ENST00000493199 OR52E5Q8NH55 327 aa4.3□□□□□ -1.72
NEK4-205ENST00000493199 OR2T6Q8NHC8 308 aa4.3□□□□□ -1.72
NEK4-205ENST00000493199 PPP1R14BQ96C90 147 aa4.3□□□□□ -1.72
NEK4-205ENST00000493199 EAF1Q96JC9 268 aaPredicted RBP4.3□□□□□ -1.72
NEK4-205ENST00000493199 C2orf50Q96LR7 162 aa4.3□□□□□ -1.72
NEK4-205ENST00000493199 RBM14Q96PK6 669 aaKnown RBP4.3□□□□□ -1.72
NEK4-205ENST00000493199 RAB40CQ96S21 281 aa4.3□□□□□ -1.72
NEK4-205ENST00000493199 TP53RKQ96S44 253 aa4.3□□□□□ -1.72
NEK4-205ENST00000493199 SLC25A33Q9BSK2 321 aa4.3□□□□□ -1.72
NEK4-205ENST00000493199 NMES1Q9C002 83 aa4.3□□□□□ -1.72
NEK4-205ENST00000493199 SLC25A31Q9H0C2 315 aa4.3□□□□□ -1.72
NEK4-205ENST00000493199 PRDM13Q9H4Q3 707 aa4.3□□□□□ -1.72
NEK4-205ENST00000493199 PLEKHA3Q9HB20 300 aa4.3□□□□□ -1.72
NEK4-205ENST00000493199 BEX1Q9HBH7 125 aa4.3□□□□□ -1.72
NEK4-205ENST00000493199 GAR1Q9NY12 217 aaKnown RBP4.3□□□□□ -1.72
NEK4-205ENST00000493199 GSKIPQ9P0R6 139 aa4.3□□□□□ -1.72
NEK4-205ENST00000493199 MGAT4CQ9UBM8 478 aa4.3□□□□□ -1.72
NEK4-205ENST00000493199 FLVCR2Q9UPI3 526 aa4.3□□□□□ -1.72
NEK4-205ENST00000493199 TCF19Q9Y242 345 aa4.3□□□□□ -1.72
NEK4-205ENST00000493199 U3KQ87 197 aa4.3□□□□□ -1.72
NEK4-205ENST00000493199 DNHD1Q96M86 4753 aa4.3□□□□□ -1.72
NEK4-205ENST00000493199 NSD1Q96L73 2696 aaPredicted RBP4.29□□□□□ -1.72
NEK4-205ENST00000493199 JMJD1CQ15652 2540 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 IGHV3OR16-10A0A075B7F0 116 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 A0A1W2PPI3 338 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 RPS10-NUDT3A0A1W2PQS6 291 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 LINC00473A8K010 186 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 AP4M1O00189 453 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 GOSR2O14653 212 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 SLC25A17O43808 307 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 CRLF1O75462 422 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 FCN3O75636 299 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 CCNKO75909 580 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 S1PR2O95136 353 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 SCGB1D2O95969 90 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 GIPP09681 153 aaPredicted RBP4.29□□□□□ -1.72
NEK4-205ENST00000493199 G6PCP35575 357 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 HTR2BP41595 481 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 IER3P46695 156 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 RPL27AP46776 148 aaKnown RBP4.29□□□□□ -1.72
NEK4-205ENST00000493199 HOXA1P49639 335 aaPredicted RBP4.29□□□□□ -1.72
NEK4-205ENST00000493199 AP2S1P53680 142 aaPredicted RBP4.29□□□□□ -1.72
NEK4-205ENST00000493199 TAS2R30P59541 319 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 HBG1P69891 147 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 HBG2P69892 147 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 HNF4GQ14541 408 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 TNXAQ16473 311 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 C5orf64Q2M2E5 130 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 DEFB112Q30KQ8 113 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 C9orf152Q5JTZ5 239 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 RUSC1-AS1Q66K80 236 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 OR4A47Q6IF82 309 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 Q6ZNX1 250 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 Q6ZPA2 131 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 SSX9Q7RTT3 188 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 SLC35E3Q7Z769 313 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 AKAP14Q86UN6 197 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 STX12Q86Y82 276 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 SELENOHQ8IZQ5 122 aaKnown RBP4.29□□□□□ -1.72
NEK4-205ENST00000493199 CIARTQ8N365 385 aaPredicted RBP4.29□□□□□ -1.72
NEK4-205ENST00000493199 COMMD1Q8N668 190 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 ZNF383Q8NA42 475 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 OR5M8Q8NGP6 311 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 TMEM167AQ8TBQ9 72 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 DDB2Q92466 427 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 MRGPRFQ96AM1 343 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 SEC22AQ96IW7 307 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 HINT2Q9BX68 163 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 HEYLQ9NQ87 328 aaPredicted RBP4.29□□□□□ -1.72
NEK4-205ENST00000493199 TMEM140Q9NV12 185 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 RNF24Q9Y225 148 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 OR51B2Q9Y5P1 312 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 ALG5Q9Y673 324 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 DSCAML1Q8TD84 2053 aa4.29□□□□□ -1.72
NEK4-205ENST00000493199 IGHV3-72A0A0B4J1Y9 119 aa4.28□□□□□ -1.72
NEK4-205ENST00000493199 A0A0G2JLM5 398 aa4.28□□□□□ -1.72
NEK4-205ENST00000493199 C15orf61A6NNL5 157 aa4.28□□□□□ -1.72
NEK4-205ENST00000493199 E5RGE8 158 aa4.28□□□□□ -1.72
NEK4-205ENST00000493199 UPK2O00526 184 aa4.28□□□□□ -1.72
NEK4-205ENST00000493199 HMGB3O15347 200 aaKnown RBP4.28□□□□□ -1.72
NEK4-205ENST00000493199 HOXA3O43365 443 aaPredicted RBP4.28□□□□□ -1.72
NEK4-205ENST00000493199 SYNGR2O43760 224 aa4.28□□□□□ -1.72
NEK4-205ENST00000493199 RAMP3O60896 148 aa4.28□□□□□ -1.72
NEK4-205ENST00000493199 NDUFA3O95167 84 aa4.28□□□□□ -1.72
NEK4-205ENST00000493199 FSHBP01225 129 aa4.28□□□□□ -1.72
NEK4-205ENST00000493199 IFNA10P01566 189 aa4.28□□□□□ -1.72
NEK4-205ENST00000493199 IGLV2-14P01704 120 aa4.28□□□□□ -1.72
NEK4-205ENST00000493199 HLA-DRB1P01911 266 aa4.28□□□□□ -1.72
NEK4-205ENST00000493199 FABP1P07148 127 aa4.28□□□□□ -1.72
NEK4-205ENST00000493199 SAA1P0DJI8 122 aaPredicted RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms