RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 TMEM177Q53S58 311 aa11.43□□□□□ -0.58
PTPN7-216ENST00000492977 AKR1C8PQ5T2L2 129 aa11.43□□□□□ -0.58
PTPN7-216ENST00000492977 PDPNQ86YL7 162 aa11.43□□□□□ -0.58
PTPN7-216ENST00000492977 TMEM147Q9BVK8 224 aa11.43□□□□□ -0.58
PTPN7-216ENST00000492977 WDR61Q9GZS3 305 aaKnown RBP11.43□□□□□ -0.58
PTPN7-216ENST00000492977 TCF19Q9Y242 345 aa11.43□□□□□ -0.58
PTPN7-216ENST00000492977 KALRNO60229 2985 aa11.42□□□□□ -0.58
PTPN7-216ENST00000492977 TMEM218A2RU14 115 aa11.42□□□□□ -0.58
PTPN7-216ENST00000492977 C15orf62A8K5M9 175 aa11.42□□□□□ -0.58
PTPN7-216ENST00000492977 UPK2O00526 184 aa11.42□□□□□ -0.58
PTPN7-216ENST00000492977 C1QL1O75973 258 aa11.42□□□□□ -0.58
PTPN7-216ENST00000492977 LIPFP07098 398 aa11.42□□□□□ -0.58
PTPN7-216ENST00000492977 MC5RP33032 325 aa11.42□□□□□ -0.58
PTPN7-216ENST00000492977 FHITP49789 147 aa11.42□□□□□ -0.58
PTPN7-216ENST00000492977 SERF2P84101 59 aa11.42□□□□□ -0.58
PTPN7-216ENST00000492977 SPINK9Q5DT21 86 aa11.42□□□□□ -0.58
PTPN7-216ENST00000492977 ARSJQ5FYB0 599 aaPredicted RBP11.42□□□□□ -0.58
PTPN7-216ENST00000492977 NBEAQ8NFP9 2946 aa11.42□□□□□ -0.58
PTPN7-216ENST00000492977 OR4C13Q8NGP0 309 aa11.42□□□□□ -0.58
PTPN7-216ENST00000492977 FAM213BQ8TBF2 198 aa11.42□□□□□ -0.58
PTPN7-216ENST00000492977 LHX4Q969G2 390 aa11.42□□□□□ -0.58
PTPN7-216ENST00000492977 FLYWCH2Q96CP2 140 aaKnown RBP11.42□□□□□ -0.58
PTPN7-216ENST00000492977 NABP2Q9BQ15 211 aa11.42□□□□□ -0.58
PTPN7-216ENST00000492977 HEYLQ9NQ87 328 aaPredicted RBP11.42□□□□□ -0.58
PTPN7-216ENST00000492977 FKBP11Q9NYL4 201 aa11.42□□□□□ -0.58
PTPN7-216ENST00000492977 BET1LQ9NYM9 111 aa11.42□□□□□ -0.58
PTPN7-216ENST00000492977 ZNF257Q9Y2Q1 563 aa11.42□□□□□ -0.58
PTPN7-216ENST00000492977 RFNGQ9Y644 331 aa11.42□□□□□ -0.58
PTPN7-216ENST00000492977 RELNP78509 3460 aa11.42□□□□□ -0.58
PTPN7-216ENST00000492977 IGHV2-26A0A0B4J1V2 119 aa11.41□□□□□ -0.58
PTPN7-216ENST00000492977 SRRM4A7MD48 611 aaKnown RBP11.41□□□□□ -0.58
PTPN7-216ENST00000492977 H7C2Y5 167 aa11.41□□□□□ -0.58
PTPN7-216ENST00000492977 RAB13P51153 203 aa11.41□□□□□ -0.58
PTPN7-216ENST00000492977 EFNA4P52798 201 aa11.41□□□□□ -0.58
PTPN7-216ENST00000492977 PRR20EP86478 221 aa11.41□□□□□ -0.58
PTPN7-216ENST00000492977 PRR20CP86479 221 aa11.41□□□□□ -0.58
PTPN7-216ENST00000492977 PRR20DP86480 221 aa11.41□□□□□ -0.58
PTPN7-216ENST00000492977 PRR20BP86481 221 aa11.41□□□□□ -0.58
PTPN7-216ENST00000492977 PRR20AP86496 221 aa11.41□□□□□ -0.58
PTPN7-216ENST00000492977 VWC2Q2TAL6 325 aa11.41□□□□□ -0.58
PTPN7-216ENST00000492977 TGIF2LXQ8IUE1 241 aa11.41□□□□□ -0.58
PTPN7-216ENST00000492977 BEND2Q8NDZ0 799 aa11.41□□□□□ -0.58
PTPN7-216ENST00000492977 LFNGQ8NES3 379 aa11.41□□□□□ -0.58
PTPN7-216ENST00000492977 TAF15Q92804 592 aaKnown RBP eCLIP11.41□□□□□ -0.58
PTPN7-216ENST00000492977 NARS2Q96I59 477 aaKnown RBP11.41□□□□□ -0.58
PTPN7-216ENST00000492977 CLEC7AQ9BXN2 247 aa11.41□□□□□ -0.58
PTPN7-216ENST00000492977 UQCC1Q9NVA1 299 aa11.41□□□□□ -0.58
PTPN7-216ENST00000492977 WASHC3Q9Y3C0 194 aa11.41□□□□□ -0.58
PTPN7-216ENST00000492977 TIMM9Q9Y5J7 89 aa11.41□□□□□ -0.58
PTPN7-216ENST00000492977 ACACBO00763 2458 aa11.41□□□□□ -0.58
PTPN7-216ENST00000492977 IFNA10P01566 189 aa11.41□□□□□ -0.58
PTPN7-216ENST00000492977 IGLV1-47P01700 117 aa11.41□□□□□ -0.58
PTPN7-216ENST00000492977 SNCAP37840 140 aa11.41□□□□□ -0.58
PTPN7-216ENST00000492977 CDKN1AP38936 164 aa11.41□□□□□ -0.58
PTPN7-216ENST00000492977 GPR6P46095 362 aaPredicted RBP11.41□□□□□ -0.58
PTPN7-216ENST00000492977 REG1BP48304 166 aa11.41□□□□□ -0.58
PTPN7-216ENST00000492977 HOXA1P49639 335 aaPredicted RBP11.41□□□□□ -0.58
PTPN7-216ENST00000492977 DVL1P1P54792 670 aaPredicted RBP11.41□□□□□ -0.58
PTPN7-216ENST00000492977 HLA-DRB5Q30154 266 aa11.41□□□□□ -0.58
PTPN7-216ENST00000492977 CENPVQ7Z7K6 275 aaPredicted RBP11.41□□□□□ -0.58
PTPN7-216ENST00000492977 HARBI1Q96MB7 349 aa11.41□□□□□ -0.58
PTPN7-216ENST00000492977 RSG1Q9BU20 258 aa11.41□□□□□ -0.58
PTPN7-216ENST00000492977 SSBP3Q9BWW4 388 aaPredicted RBP11.41□□□□□ -0.58
PTPN7-216ENST00000492977 TREM1Q9NP99 234 aa11.41□□□□□ -0.58
PTPN7-216ENST00000492977 ENY2Q9NPA8 101 aa11.41□□□□□ -0.58
PTPN7-216ENST00000492977 FBXO7Q9Y3I1 522 aa11.41□□□□□ -0.58
PTPN7-216ENST00000492977 OR51B2Q9Y5P1 312 aa11.41□□□□□ -0.58
PTPN7-216ENST00000492977 TET2Q6N021 2002 aaPredicted RBP11.4□□□□□ -0.58
PTPN7-216ENST00000492977 SMG1Q96Q15 3661 aaKnown RBP11.4□□□□□ -0.58
PTPN7-216ENST00000492977 BTBD17A6NE02 478 aa11.4□□□□□ -0.58
PTPN7-216ENST00000492977 C22orf46C9J442 243 aa11.4□□□□□ -0.58
PTPN7-216ENST00000492977 RNASEK-C17orf49H0YIS7 233 aa11.4□□□□□ -0.58
PTPN7-216ENST00000492977 KBTBD11O94819 623 aa11.4□□□□□ -0.58
PTPN7-216ENST00000492977 CD5P06127 495 aa11.4□□□□□ -0.58
PTPN7-216ENST00000492977 SAA1P0DJI8 122 aaPredicted RBP11.4□□□□□ -0.58
PTPN7-216ENST00000492977 SRSF3P84103 164 aaKnown RBP11.4□□□□□ -0.58
PTPN7-216ENST00000492977 TLE4Q04727 773 aa11.4□□□□□ -0.58
PTPN7-216ENST00000492977 OR4A5Q8NH83 315 aa11.4□□□□□ -0.58
PTPN7-216ENST00000492977 VSTM2AQ8TAG5 236 aa11.4□□□□□ -0.58
PTPN7-216ENST00000492977 GGACTQ9BVM4 153 aa11.4□□□□□ -0.58
PTPN7-216ENST00000492977 LOC105371242A0A075B767 164 aa11.39□□□□□ -0.59
PTPN7-216ENST00000492977 UBE2L5PA0A1B0GUS4 154 aa11.39□□□□□ -0.59
PTPN7-216ENST00000492977 BUB1B-PAK6H3BSN5 160 aa11.39□□□□□ -0.59
PTPN7-216ENST00000492977 M0R1W7 72 aa11.39□□□□□ -0.59
PTPN7-216ENST00000492977 AGPAT2O15120 278 aa11.39□□□□□ -0.59
PTPN7-216ENST00000492977 H2AFB1P0C5Y9 115 aa11.39□□□□□ -0.59
PTPN7-216ENST00000492977 RAB11AP62491 216 aa11.39□□□□□ -0.59
PTPN7-216ENST00000492977 AKR1C1Q04828 323 aa11.39□□□□□ -0.59
PTPN7-216ENST00000492977 DIAPH2-AS1Q14236 149 aa11.39□□□□□ -0.59
PTPN7-216ENST00000492977 OR5B3Q8NH48 314 aa11.39□□□□□ -0.59
PTPN7-216ENST00000492977 ONECUT1Q9UBC0 465 aa11.39□□□□□ -0.59
PTPN7-216ENST00000492977 AMMECR1Q9Y4X0 333 aaPredicted RBP11.39□□□□□ -0.59
PTPN7-216ENST00000492977 A0A1B0GW64 132 aa11.38□□□□□ -0.59
PTPN7-216ENST00000492977 OVOL3O00110 214 aa11.38□□□□□ -0.59
PTPN7-216ENST00000492977 APOC3P02656 99 aa11.38□□□□□ -0.59
PTPN7-216ENST00000492977 MDKP21741 143 aaPredicted RBP11.38□□□□□ -0.59
PTPN7-216ENST00000492977 USF1P22415 310 aaPredicted RBP11.38□□□□□ -0.59
PTPN7-216ENST00000492977 LGALS7P47929 136 aa11.38□□□□□ -0.59
PTPN7-216ENST00000492977 ATP5IP56385 69 aaPredicted RBP11.38□□□□□ -0.59
PTPN7-216ENST00000492977 RPS16P62249 146 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms