RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 LALBAP00709 142 aa7.09□□□□□ -1.27
HDAC3-212ENST00000492407 RLN2P04090 185 aa7.09□□□□□ -1.27
HDAC3-212ENST00000492407 FOLR2P14207 255 aa7.09□□□□□ -1.27
HDAC3-212ENST00000492407 TMEM267Q0VDI3 215 aaPredicted RBP7.09□□□□□ -1.27
HDAC3-212ENST00000492407 SMN1Q16637 294 aaKnown RBP7.09□□□□□ -1.27
HDAC3-212ENST00000492407 OGFRL1Q5TC84 451 aaPredicted RBP7.09□□□□□ -1.27
HDAC3-212ENST00000492407 AWAT2Q6E213 333 aa7.09□□□□□ -1.27
HDAC3-212ENST00000492407 CD200R1LQ6Q8B3 271 aa7.09□□□□□ -1.27
HDAC3-212ENST00000492407 COMMD7Q86VX2 200 aa7.09□□□□□ -1.27
HDAC3-212ENST00000492407 MTURNQ8N3F0 131 aa7.09□□□□□ -1.27
HDAC3-212ENST00000492407 CCDC71LQ8N9Z2 235 aa7.09□□□□□ -1.27
HDAC3-212ENST00000492407 OR10V1Q8NGI7 309 aa7.09□□□□□ -1.27
HDAC3-212ENST00000492407 OR6M1Q8NGM8 313 aa7.09□□□□□ -1.27
HDAC3-212ENST00000492407 OR13F1Q8NGS4 319 aa7.09□□□□□ -1.27
HDAC3-212ENST00000492407 DEDD2Q8WXF8 326 aa7.09□□□□□ -1.27
HDAC3-212ENST00000492407 NARS2Q96I59 477 aaKnown RBP7.09□□□□□ -1.27
HDAC3-212ENST00000492407 NABP2Q9BQ15 211 aa7.09□□□□□ -1.27
HDAC3-212ENST00000492407 C7orf50Q9BRJ6 194 aaKnown RBP7.09□□□□□ -1.27
HDAC3-212ENST00000492407 SELENOIQ9C0D9 397 aa7.09□□□□□ -1.27
HDAC3-212ENST00000492407 ZNF430Q9H8G1 570 aaPredicted RBP7.09□□□□□ -1.27
HDAC3-212ENST00000492407 CNOT2Q9NZN8 540 aaKnown RBP7.09□□□□□ -1.27
HDAC3-212ENST00000492407 PIPOXQ9P0Z9 390 aa7.09□□□□□ -1.27
HDAC3-212ENST00000492407 KIAA1456Q9P272 454 aa7.09□□□□□ -1.27
HDAC3-212ENST00000492407 METTL1Q9UBP6 276 aaKnown RBP7.09□□□□□ -1.27
HDAC3-212ENST00000492407 RNF150Q9ULK6 438 aa7.09□□□□□ -1.27
HDAC3-212ENST00000492407 TRAV25A0A0B4J276 109 aa7.08□□□□□ -1.28
HDAC3-212ENST00000492407 TSTD3H0UI37 97 aa7.08□□□□□ -1.28
HDAC3-212ENST00000492407 H3BMQ9 156 aa7.08□□□□□ -1.28
HDAC3-212ENST00000492407 J3QRK9 145 aa7.08□□□□□ -1.28
HDAC3-212ENST00000492407 OVOL1O14753 267 aa7.08□□□□□ -1.28
HDAC3-212ENST00000492407 RAB29O14966 203 aa7.08□□□□□ -1.28
HDAC3-212ENST00000492407 ATP6V0E1O15342 81 aa7.08□□□□□ -1.28
HDAC3-212ENST00000492407 IFNA7P01567 189 aa7.08□□□□□ -1.28
HDAC3-212ENST00000492407 DDTP30046 118 aa7.08□□□□□ -1.28
HDAC3-212ENST00000492407 CCR6P51684 374 aa7.08□□□□□ -1.28
HDAC3-212ENST00000492407 DEFA1P59665 94 aa7.08□□□□□ -1.28
HDAC3-212ENST00000492407 DEFA3P59666 94 aa7.08□□□□□ -1.28
HDAC3-212ENST00000492407 RAB2AP61019 212 aa7.08□□□□□ -1.28
HDAC3-212ENST00000492407 ADARB1P78563 741 aaKnown RBP7.08□□□□□ -1.28
HDAC3-212ENST00000492407 ARL6IP1Q15041 203 aa7.08□□□□□ -1.28
HDAC3-212ENST00000492407 HMGN3Q15651 99 aa7.08□□□□□ -1.28
HDAC3-212ENST00000492407 C19orf54Q5BKX5 351 aa7.08□□□□□ -1.28
HDAC3-212ENST00000492407 C6orf141Q5SZD1 244 aa7.08□□□□□ -1.28
HDAC3-212ENST00000492407 FAM53AQ6NSI3 398 aaPredicted RBP7.08□□□□□ -1.28
HDAC3-212ENST00000492407 SLC16A13Q7RTY0 426 aa7.08□□□□□ -1.28
HDAC3-212ENST00000492407 ODF3L1Q8IXM7 274 aa7.08□□□□□ -1.28
HDAC3-212ENST00000492407 C9orf62Q8N4C0 152 aa7.08□□□□□ -1.28
HDAC3-212ENST00000492407 HSD17B11Q8NBQ5 300 aa7.08□□□□□ -1.28
HDAC3-212ENST00000492407 OR2AK2Q8NG84 335 aa7.08□□□□□ -1.28
HDAC3-212ENST00000492407 UBALD1Q8TB05 177 aa7.08□□□□□ -1.28
HDAC3-212ENST00000492407 MRPL30Q8TCC3 161 aaKnown RBP7.08□□□□□ -1.28
HDAC3-212ENST00000492407 RAB2BQ8WUD1 216 aa7.08□□□□□ -1.28
HDAC3-212ENST00000492407 CACNG8Q8WXS5 425 aa7.08□□□□□ -1.28
HDAC3-212ENST00000492407 RAB3CQ96E17 227 aa7.08□□□□□ -1.28
HDAC3-212ENST00000492407 DERL3Q96Q80 235 aa7.08□□□□□ -1.28
HDAC3-212ENST00000492407 RNF2Q99496 336 aa7.08□□□□□ -1.28
HDAC3-212ENST00000492407 ANKRD60Q9BZ19 345 aa7.08□□□□□ -1.28
HDAC3-212ENST00000492407 KLK15Q9H2R5 256 aa7.08□□□□□ -1.28
HDAC3-212ENST00000492407 ABRACLQ9P1F3 81 aa7.08□□□□□ -1.28
HDAC3-212ENST00000492407 STEAP1Q9UHE8 339 aa7.08□□□□□ -1.28
HDAC3-212ENST00000492407 STRAPQ9Y3F4 350 aaKnown RBP7.08□□□□□ -1.28
HDAC3-212ENST00000492407 UBE2QL1A1L167 161 aa7.07□□□□□ -1.28
HDAC3-212ENST00000492407 C5orf52A6NGY3 159 aa7.07□□□□□ -1.28
HDAC3-212ENST00000492407 OR5H14A6NHG9 310 aa7.07□□□□□ -1.28
HDAC3-212ENST00000492407 A8MZ25 164 aa7.07□□□□□ -1.28
HDAC3-212ENST00000492407 LINC01619G3V211 115 aa7.07□□□□□ -1.28
HDAC3-212ENST00000492407 G3V318 75 aa7.07□□□□□ -1.28
HDAC3-212ENST00000492407 SCGB2A1O75556 95 aa7.07□□□□□ -1.28
HDAC3-212ENST00000492407 C1QBP02746 253 aa7.07□□□□□ -1.28
HDAC3-212ENST00000492407 MAS1P04201 325 aa7.07□□□□□ -1.28
HDAC3-212ENST00000492407 LGALS1P09382 135 aaKnown RBP7.07□□□□□ -1.28
HDAC3-212ENST00000492407 OR8U9P0C7N5 309 aa7.07□□□□□ -1.28
HDAC3-212ENST00000492407 CD37P11049 281 aa7.07□□□□□ -1.28
HDAC3-212ENST00000492407 SLC2A2P11168 524 aaPredicted RBP7.07□□□□□ -1.28
HDAC3-212ENST00000492407 ZNF25P17030 456 aaPredicted RBP7.07□□□□□ -1.28
HDAC3-212ENST00000492407 PPP1CCP36873 323 aaKnown RBP7.07□□□□□ -1.28
HDAC3-212ENST00000492407 RPS20P60866 119 aaKnown RBP7.07□□□□□ -1.28
HDAC3-212ENST00000492407 ST3GAL4Q11206 333 aa7.07□□□□□ -1.28
HDAC3-212ENST00000492407 PMS2P11Q13670 270 aa7.07□□□□□ -1.28
HDAC3-212ENST00000492407 TRAM1Q15629 374 aa7.07□□□□□ -1.28
HDAC3-212ENST00000492407 TBCEQ15813 527 aaPredicted RBP7.07□□□□□ -1.28
HDAC3-212ENST00000492407 ASPHD1Q5U4P2 390 aa7.07□□□□□ -1.28
HDAC3-212ENST00000492407 OR8G2PQ6IF36 304 aa7.07□□□□□ -1.28
HDAC3-212ENST00000492407 ACSM6Q6P461 480 aa7.07□□□□□ -1.28
HDAC3-212ENST00000492407 MOB1BQ7L9L4 216 aa7.07□□□□□ -1.28
HDAC3-212ENST00000492407 C8orf59Q8N0T1 100 aaPredicted RBP7.07□□□□□ -1.28
HDAC3-212ENST00000492407 PUSL1Q8N0Z8 303 aaKnown RBP7.07□□□□□ -1.28
HDAC3-212ENST00000492407 MS4A15Q8N5U1 240 aa7.07□□□□□ -1.28
HDAC3-212ENST00000492407 POC5Q8NA72 575 aa7.07□□□□□ -1.28
HDAC3-212ENST00000492407 OR52L2PQ8NGH6 319 aa7.07□□□□□ -1.28
HDAC3-212ENST00000492407 OR13C5Q8NGS8 318 aa7.07□□□□□ -1.28
HDAC3-212ENST00000492407 MUC7Q8TAX7 377 aa7.07□□□□□ -1.28
HDAC3-212ENST00000492407 GPX8Q8TED1 209 aa7.07□□□□□ -1.28
HDAC3-212ENST00000492407 DCUN1D4Q92564 292 aa7.07□□□□□ -1.28
HDAC3-212ENST00000492407 GGHQ92820 318 aa7.07□□□□□ -1.28
HDAC3-212ENST00000492407 FLYWCH2Q96CP2 140 aaKnown RBP7.07□□□□□ -1.28
HDAC3-212ENST00000492407 ORAI1Q96D31 301 aa7.07□□□□□ -1.28
HDAC3-212ENST00000492407 MISP3Q96FF7 219 aa7.07□□□□□ -1.28
HDAC3-212ENST00000492407 NEDD4LQ96PU5 975 aa7.07□□□□□ -1.28
HDAC3-212ENST00000492407 TMEM208Q9BTX3 173 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms