RNA–Protein interactions for RNA: ENST00000491701.1

CLIP4-211, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 1,401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-211ENST00000491701 RFPL4AL1F8VTS6 287 aa3.61□□□□□ -1.83
CLIP4-211ENST00000491701 RAB29O14966 203 aa3.61□□□□□ -1.83
CLIP4-211ENST00000491701 LYRM1O43325 122 aa3.61□□□□□ -1.83
CLIP4-211ENST00000491701 CHST1O43916 411 aa3.61□□□□□ -1.83
CLIP4-211ENST00000491701 PDCD6O75340 191 aa3.61□□□□□ -1.83
CLIP4-211ENST00000491701 MMP23AO75900 390 aa3.61□□□□□ -1.83
CLIP4-211ENST00000491701 OR2H2O95918 312 aa3.61□□□□□ -1.83
CLIP4-211ENST00000491701 CYB5R3P00387 301 aaPredicted RBP3.61□□□□□ -1.83
CLIP4-211ENST00000491701 FCGR3AP08637 254 aa3.61□□□□□ -1.83
CLIP4-211ENST00000491701 SCTP09683 121 aa3.61□□□□□ -1.83
CLIP4-211ENST00000491701 RCC1P18754 421 aaPredicted RBP3.61□□□□□ -1.83
CLIP4-211ENST00000491701 PSMB6P28072 239 aa3.61□□□□□ -1.83
CLIP4-211ENST00000491701 PROK1P58294 105 aa3.61□□□□□ -1.83
CLIP4-211ENST00000491701 RPL24P83731 157 aaKnown RBP3.61□□□□□ -1.83
CLIP4-211ENST00000491701 DHODHQ02127 395 aa3.61□□□□□ -1.83
CLIP4-211ENST00000491701 PAX2Q02962 417 aa3.61□□□□□ -1.83
CLIP4-211ENST00000491701 EIF4EBP1Q13541 118 aaPredicted RBP3.61□□□□□ -1.83
CLIP4-211ENST00000491701 SRSF7Q16629 238 aaKnown RBP eCLIP3.61□□□□□ -1.83
CLIP4-211ENST00000491701 C17orf58Q2M2W7 97 aa3.61□□□□□ -1.83
CLIP4-211ENST00000491701 TMEM69Q5SWH9 247 aa3.61□□□□□ -1.83
CLIP4-211ENST00000491701 BAIAP2L2Q6UXY1 529 aa3.61□□□□□ -1.83
CLIP4-211ENST00000491701 ZNF782Q6ZMW2 699 aaPredicted RBP3.61□□□□□ -1.83
CLIP4-211ENST00000491701 ZNF497Q6ZNH5 498 aa3.61□□□□□ -1.83
CLIP4-211ENST00000491701 OR56B4Q8NH76 319 aa3.61□□□□□ -1.83
CLIP4-211ENST00000491701 CA5BP1Q8WTZ4 195 aa3.61□□□□□ -1.83
CLIP4-211ENST00000491701 LRRC29Q8WV35 223 aa3.61□□□□□ -1.83
CLIP4-211ENST00000491701 FCAMRQ8WWV6 532 aa3.61□□□□□ -1.83
CLIP4-211ENST00000491701 RAB3CQ96E17 227 aa3.61□□□□□ -1.83
CLIP4-211ENST00000491701 RBMXL1Q96E39 390 aaKnown RBP3.61□□□□□ -1.83
CLIP4-211ENST00000491701 PIK3IP1Q96FE7 263 aa3.61□□□□□ -1.83
CLIP4-211ENST00000491701 NIPSNAP3BQ9BS92 247 aa3.61□□□□□ -1.83
CLIP4-211ENST00000491701 RTL8AQ9BWD3 113 aa3.61□□□□□ -1.83
CLIP4-211ENST00000491701 CSTL1Q9H114 145 aa3.61□□□□□ -1.83
CLIP4-211ENST00000491701 PPA2Q9H2U2 334 aa3.61□□□□□ -1.83
CLIP4-211ENST00000491701 LINC00574Q9H8X3 128 aa3.61□□□□□ -1.83
CLIP4-211ENST00000491701 DIABLOQ9NR28 239 aa3.61□□□□□ -1.83
CLIP4-211ENST00000491701 ZNF107Q9UII5 783 aaPredicted RBP3.61□□□□□ -1.83
CLIP4-211ENST00000491701 VSIG4Q9Y279 399 aa3.61□□□□□ -1.83
CLIP4-211ENST00000491701 MMP24Q9Y5R2 645 aa3.61□□□□□ -1.83
CLIP4-211ENST00000491701 A0A096LNT2 108 aa3.6□□□□□ -1.83
CLIP4-211ENST00000491701 IGKV1D-13A0A0B4J2D9 117 aa3.6□□□□□ -1.83
CLIP4-211ENST00000491701 A0A1B0GUS0 222 aa3.6□□□□□ -1.83
CLIP4-211ENST00000491701 FUOMA2VDF0 154 aa3.6□□□□□ -1.83
CLIP4-211ENST00000491701 OR5H14A6NHG9 310 aa3.6□□□□□ -1.83
CLIP4-211ENST00000491701 K7N7A8 449 aa3.6□□□□□ -1.83
CLIP4-211ENST00000491701 PPIHO43447 177 aaKnown RBP3.6□□□□□ -1.83
CLIP4-211ENST00000491701 RBBP9O75884 186 aa3.6□□□□□ -1.83
CLIP4-211ENST00000491701 ATP5LO75964 103 aa3.6□□□□□ -1.83
CLIP4-211ENST00000491701 NDUFB6O95139 128 aa3.6□□□□□ -1.83
CLIP4-211ENST00000491701 FSTL3O95633 263 aa3.6□□□□□ -1.83
CLIP4-211ENST00000491701 HAND1O96004 215 aa3.6□□□□□ -1.83
CLIP4-211ENST00000491701 PMP2P02689 132 aa3.6□□□□□ -1.83
CLIP4-211ENST00000491701 TCRBP04435 133 aa3.6□□□□□ -1.83
CLIP4-211ENST00000491701 IGKV1-13P0DP09 117 aa3.6□□□□□ -1.83
CLIP4-211ENST00000491701 GTF2F2P13984 249 aa3.6□□□□□ -1.83
CLIP4-211ENST00000491701 GABRR1P24046 479 aa3.6□□□□□ -1.83
CLIP4-211ENST00000491701 GIFP27352 417 aa3.6□□□□□ -1.83
CLIP4-211ENST00000491701 HLA-DMAP28067 261 aa3.6□□□□□ -1.83
CLIP4-211ENST00000491701 SUPT4H1P63272 117 aaKnown RBP3.6□□□□□ -1.83
CLIP4-211ENST00000491701 CCL8P80075 99 aa3.6□□□□□ -1.83
CLIP4-211ENST00000491701 TNFAIP6P98066 277 aaPredicted RBP3.6□□□□□ -1.83
CLIP4-211ENST00000491701 SSBP1Q04837 148 aaKnown RBP3.6□□□□□ -1.83
CLIP4-211ENST00000491701 IL15RAQ13261 267 aa3.6□□□□□ -1.83
CLIP4-211ENST00000491701 RSU1Q15404 277 aa3.6□□□□□ -1.83
CLIP4-211ENST00000491701 MPV17LQ2QL34 196 aa3.6□□□□□ -1.83
CLIP4-211ENST00000491701 FAM106AQ4KMX7 169 aa3.6□□□□□ -1.83
CLIP4-211ENST00000491701 VAX1Q5SQQ9 334 aa3.6□□□□□ -1.83
CLIP4-211ENST00000491701 LDLRAD2Q5SZI1 272 aa3.6□□□□□ -1.83
CLIP4-211ENST00000491701 SLC35E4Q6ICL7 350 aa3.6□□□□□ -1.83
CLIP4-211ENST00000491701 SPNS3Q6ZMD2 512 aa3.6□□□□□ -1.83
CLIP4-211ENST00000491701 SSX8Q7RTT4 187 aa3.6□□□□□ -1.83
CLIP4-211ENST00000491701 TRAPPC6BQ86SZ2 158 aa3.6□□□□□ -1.83
CLIP4-211ENST00000491701 INO80EQ8NBZ0 244 aaPredicted RBP3.6□□□□□ -1.83
CLIP4-211ENST00000491701 CHST4Q8NCG5 386 aa3.6□□□□□ -1.83
CLIP4-211ENST00000491701 OR52E5Q8NH55 327 aa3.6□□□□□ -1.83
CLIP4-211ENST00000491701 RDH5Q92781 318 aa3.6□□□□□ -1.83
CLIP4-211ENST00000491701 ST6GAL2Q96JF0 529 aa3.6□□□□□ -1.83
CLIP4-211ENST00000491701 GPER1Q99527 375 aa3.6□□□□□ -1.83
CLIP4-211ENST00000491701 SLC22A4Q9H015 551 aa3.6□□□□□ -1.83
CLIP4-211ENST00000491701 RHOFQ9HBH0 211 aa3.6□□□□□ -1.83
CLIP4-211ENST00000491701 MYOZ1Q9NP98 299 aaPredicted RBP3.6□□□□□ -1.83
CLIP4-211ENST00000491701 RASL12Q9NYN1 266 aa3.6□□□□□ -1.83
CLIP4-211ENST00000491701 NOP16Q9Y3C1 178 aaKnown RBP3.6□□□□□ -1.83
CLIP4-211ENST00000491701 NSD1Q96L73 2696 aaPredicted RBP3.6□□□□□ -1.83
CLIP4-211ENST00000491701 DNHD1Q96M86 4753 aa3.59□□□□□ -1.83
CLIP4-211ENST00000491701 IGLV9-49A0A0B4J1Y8 123 aa3.59□□□□□ -1.84
CLIP4-211ENST00000491701 A0A1W2PRD5 423 aa3.59□□□□□ -1.84
CLIP4-211ENST00000491701 TRAPPC2LH3BP13 241 aa3.59□□□□□ -1.84
CLIP4-211ENST00000491701 SIRPB1O00241 398 aa3.59□□□□□ -1.84
CLIP4-211ENST00000491701 SDCBPO00560 298 aaPredicted RBP3.59□□□□□ -1.84
CLIP4-211ENST00000491701 TOR1AO14656 332 aa3.59□□□□□ -1.84
CLIP4-211ENST00000491701 ITGB1BP1O14713 200 aa3.59□□□□□ -1.84
CLIP4-211ENST00000491701 DEGS1O15121 323 aa3.59□□□□□ -1.84
CLIP4-211ENST00000491701 ATP6V0E1O15342 81 aa3.59□□□□□ -1.84
CLIP4-211ENST00000491701 SIGLEC5O15389 551 aa3.59□□□□□ -1.84
CLIP4-211ENST00000491701 ZNF780AO75290 641 aaPredicted RBP3.59□□□□□ -1.84
CLIP4-211ENST00000491701 PTTG1O95997 202 aa3.59□□□□□ -1.84
CLIP4-211ENST00000491701 CYB5AP00167 134 aa3.59□□□□□ -1.84
CLIP4-211ENST00000491701 IGHG4P01861 327 aa3.59□□□□□ -1.84
CLIP4-211ENST00000491701 WNT2P09544 360 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms