RNA–Protein interactions for RNA: ENST00000491460.5

CPA1-208, Transcript of carboxypeptidase A1, human

TSL 2

Gene CPA1, Length 1,063 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPA1-208	ENST00000491460	OR4S2	Q8NH73	311 aa		10.81	□□□□□ -0.68
CPA1-208	ENST00000491460	EEF1AKMT3	Q96AZ1	226 aa		10.81	□□□□□ -0.68
CPA1-208	ENST00000491460	CCDC140	Q96MF4	163 aa		10.81	□□□□□ -0.68
CPA1-208	ENST00000491460	FYTTD1	Q96QD9	318 aa	Known RBP	10.81	□□□□□ -0.68
CPA1-208	ENST00000491460	OR2A7	Q96R45	310 aa		10.81	□□□□□ -0.68
CPA1-208	ENST00000491460	SLC2A9	Q9NRM0	540 aa		10.81	□□□□□ -0.68
CPA1-208	ENST00000491460	RBMX2	Q9Y388	322 aa	Known RBP	10.81	□□□□□ -0.68
CPA1-208	ENST00000491460		J3QRK9	145 aa		10.8	□□□□□ -0.68
CPA1-208	ENST00000491460	RGS10	O43665	173 aa		10.8	□□□□□ -0.68
CPA1-208	ENST00000491460	NDUFB8	O95169	186 aa		10.8	□□□□□ -0.68
CPA1-208	ENST00000491460	IGHV3-23	P01764	117 aa		10.8	□□□□□ -0.68
CPA1-208	ENST00000491460	IL6R	P08887	468 aa	Predicted RBP	10.8	□□□□□ -0.68
CPA1-208	ENST00000491460	CTXN2	P0C2S0	81 aa		10.8	□□□□□ -0.68
CPA1-208	ENST00000491460	HIST1H1B	P16401	226 aa	Known RBP	10.8	□□□□□ -0.68
CPA1-208	ENST00000491460	C19orf35	Q6ZS72	473 aa		10.8	□□□□□ -0.68
CPA1-208	ENST00000491460	VKORC1L1	Q8N0U8	176 aa		10.8	□□□□□ -0.68
CPA1-208	ENST00000491460	TMEM167A	Q8TBQ9	72 aa		10.8	□□□□□ -0.68
CPA1-208	ENST00000491460	MLX	Q9UH92	298 aa		10.8	□□□□□ -0.68
CPA1-208	ENST00000491460	OR2W1	Q9Y3N9	320 aa		10.8	□□□□□ -0.68
CPA1-208	ENST00000491460	SELENOK	Q9Y6D0	94 aa		10.8	□□□□□ -0.68
CPA1-208	ENST00000491460	IGKV1D-8	A0A087WSZ0	117 aa		10.79	□□□□□ -0.68
CPA1-208	ENST00000491460	TRAV25	A0A0B4J276	109 aa		10.79	□□□□□ -0.68
CPA1-208	ENST00000491460	IFITM5	A6NNB3	132 aa		10.79	□□□□□ -0.68
CPA1-208	ENST00000491460	SCAF4	O95104	1147 aa	Known RBP	10.79	□□□□□ -0.68
CPA1-208	ENST00000491460	HLA-DQB1	P01920	261 aa		10.79	□□□□□ -0.68
CPA1-208	ENST00000491460	CRYGC	P07315	174 aa		10.79	□□□□□ -0.68
CPA1-208	ENST00000491460	ZNF735	P0CB33	412 aa		10.79	□□□□□ -0.68
CPA1-208	ENST00000491460	PSMB6	P28072	239 aa		10.79	□□□□□ -0.68
CPA1-208	ENST00000491460	RPL30	P62888	115 aa	Known RBP	10.79	□□□□□ -0.68
CPA1-208	ENST00000491460	BTNL8	Q6UX41	500 aa		10.79	□□□□□ -0.68
CPA1-208	ENST00000491460	PUSL1	Q8N0Z8	303 aa	Known RBP	10.79	□□□□□ -0.68
CPA1-208	ENST00000491460	TCTEX1D2	Q8WW35	142 aa		10.79	□□□□□ -0.68
CPA1-208	ENST00000491460	MARC2	Q969Z3	335 aa		10.79	□□□□□ -0.68
CPA1-208	ENST00000491460	FANCD2OS	Q96PS1	177 aa		10.79	□□□□□ -0.68
CPA1-208	ENST00000491460	MGLL	Q99685	303 aa		10.79	□□□□□ -0.68
CPA1-208	ENST00000491460	HSD17B10	Q99714	261 aa	Known RBP	10.79	□□□□□ -0.68
CPA1-208	ENST00000491460	CCDC90B	Q9GZT6	254 aa		10.79	□□□□□ -0.68
CPA1-208	ENST00000491460	DUSP21	Q9H596	190 aa		10.79	□□□□□ -0.68
CPA1-208	ENST00000491460	TP53TG1	Q9Y2A0	90 aa		10.79	□□□□□ -0.68
CPA1-208	ENST00000491460	TRBV7-1	A0A0A6YYK4	115 aa		10.78	□□□□□ -0.68
CPA1-208	ENST00000491460	TRAV1-2	A0A0B4J238	106 aa		10.78	□□□□□ -0.68
CPA1-208	ENST00000491460	DEFA4	P12838	97 aa		10.78	□□□□□ -0.68
CPA1-208	ENST00000491460	CTRB1	P17538	263 aa		10.78	□□□□□ -0.68
CPA1-208	ENST00000491460	NFYA	P23511	347 aa	Predicted RBP	10.78	□□□□□ -0.68
CPA1-208	ENST00000491460	MYL9	P24844	172 aa		10.78	□□□□□ -0.68
CPA1-208	ENST00000491460	OR10A3	P58181	314 aa		10.78	□□□□□ -0.68
CPA1-208	ENST00000491460	TNFRSF9	Q07011	255 aa		10.78	□□□□□ -0.68
CPA1-208	ENST00000491460	KLK9	Q2XQG4	91 aa		10.78	□□□□□ -0.68
CPA1-208	ENST00000491460	TM4SF20	Q53R12	229 aa		10.78	□□□□□ -0.68
CPA1-208	ENST00000491460	CTRB2	Q6GPI1	263 aa		10.78	□□□□□ -0.68
CPA1-208	ENST00000491460	RBPMS2	Q6ZRY4	209 aa	Known RBP	10.78	□□□□□ -0.68
CPA1-208	ENST00000491460	WFDC3	Q8IUB2	231 aa		10.78	□□□□□ -0.68
CPA1-208	ENST00000491460	OR1L6	Q8NGR2	347 aa		10.78	□□□□□ -0.68
CPA1-208	ENST00000491460	CXorf58	Q96LI9	332 aa		10.78	□□□□□ -0.68
CPA1-208	ENST00000491460	KLK9	Q9UKQ9	250 aa		10.78	□□□□□ -0.68
CPA1-208	ENST00000491460		S4R3C0	116 aa		10.78	□□□□□ -0.68
CPA1-208	ENST00000491460	FRAS1	Q86XX4	4008 aa		10.77	□□□□□ -0.69
CPA1-208	ENST00000491460		A0A0J9YWU9	116 aa		10.77	□□□□□ -0.69
CPA1-208	ENST00000491460		E7EUB6	86 aa		10.77	□□□□□ -0.69
CPA1-208	ENST00000491460	HRAS	P01112	189 aa		10.77	□□□□□ -0.69
CPA1-208	ENST00000491460	AREG	P15514	252 aa		10.77	□□□□□ -0.69
CPA1-208	ENST00000491460	GAL	P22466	123 aa		10.77	□□□□□ -0.69
CPA1-208	ENST00000491460	CRHBP	P24387	322 aa		10.77	□□□□□ -0.69
CPA1-208	ENST00000491460	BMI1	P35226	326 aa		10.77	□□□□□ -0.69
CPA1-208	ENST00000491460	APOC4	P55056	127 aa		10.77	□□□□□ -0.69
CPA1-208	ENST00000491460	RPL8	P62917	257 aa	Known RBP	10.77	□□□□□ -0.69
CPA1-208	ENST00000491460	CEMP1	Q6PRD7	247 aa	Predicted RBP	10.77	□□□□□ -0.69
CPA1-208	ENST00000491460		Q6ZWC4	215 aa		10.77	□□□□□ -0.69
CPA1-208	ENST00000491460	PRSS48	Q7RTY5	328 aa		10.77	□□□□□ -0.69
CPA1-208	ENST00000491460	SLC38A6	Q8IZM9	456 aa		10.77	□□□□□ -0.69
CPA1-208	ENST00000491460	ATG5	Q9H1Y0	275 aa		10.77	□□□□□ -0.69
CPA1-208	ENST00000491460	DCSTAMP	Q9H295	470 aa		10.77	□□□□□ -0.69
CPA1-208	ENST00000491460	MRPL27	Q9P0M9	148 aa	Known RBP	10.77	□□□□□ -0.69
CPA1-208	ENST00000491460	SPATA2	Q9UM82	520 aa		10.77	□□□□□ -0.69
CPA1-208	ENST00000491460	KLK5	Q9Y337	293 aa	Predicted RBP	10.77	□□□□□ -0.69
CPA1-208	ENST00000491460	UFC1	Q9Y3C8	167 aa		10.77	□□□□□ -0.69
CPA1-208	ENST00000491460	KMT2A	Q03164	3969 aa		10.76	□□□□□ -0.69
CPA1-208	ENST00000491460	IGLV11-55	A0A075B6I3	123 aa		10.76	□□□□□ -0.69
CPA1-208	ENST00000491460	IGKV1D-13	A0A0B4J2D9	117 aa		10.76	□□□□□ -0.69
CPA1-208	ENST00000491460		A0A1B0GW64	132 aa		10.76	□□□□□ -0.69
CPA1-208	ENST00000491460	SPRY2	O43597	315 aa		10.76	□□□□□ -0.69
CPA1-208	ENST00000491460	IGLV2-14	P01704	120 aa		10.76	□□□□□ -0.69
CPA1-208	ENST00000491460	CLEC3B	P05452	202 aa		10.76	□□□□□ -0.69
CPA1-208	ENST00000491460	C8orf88	P0DMB2	117 aa		10.76	□□□□□ -0.69
CPA1-208	ENST00000491460	IGKV1-13	P0DP09	117 aa		10.76	□□□□□ -0.69
CPA1-208	ENST00000491460	RAB3B	P20337	219 aa		10.76	□□□□□ -0.69
CPA1-208	ENST00000491460	ELL	P55199	621 aa	Predicted RBP	10.76	□□□□□ -0.69
CPA1-208	ENST00000491460	CDNF	Q49AH0	187 aa		10.76	□□□□□ -0.69
CPA1-208	ENST00000491460	HACD4	Q5VWC8	232 aa		10.76	□□□□□ -0.69
CPA1-208	ENST00000491460	CNIH2	Q6PI25	160 aa		10.76	□□□□□ -0.69
CPA1-208	ENST00000491460	ZNF66	Q6ZN08	573 aa		10.76	□□□□□ -0.69
CPA1-208	ENST00000491460	LYG2	Q86SG7	212 aa		10.76	□□□□□ -0.69
CPA1-208	ENST00000491460	MFSD4A	Q8N468	514 aa		10.76	□□□□□ -0.69
CPA1-208	ENST00000491460	OR2C3	Q8N628	320 aa		10.76	□□□□□ -0.69
CPA1-208	ENST00000491460	ELF5	Q9UKW6	265 aa	Predicted RBP	10.76	□□□□□ -0.69
CPA1-208	ENST00000491460	MFSD2B	A6NFX1	497 aa		10.75	□□□□□ -0.69
CPA1-208	ENST00000491460	UBE2C	O00762	179 aa		10.75	□□□□□ -0.69
CPA1-208	ENST00000491460	MYOD1	P15172	320 aa		10.75	□□□□□ -0.69
CPA1-208	ENST00000491460	HLA-G	P17693	338 aa		10.75	□□□□□ -0.69
CPA1-208	ENST00000491460	ATF4	P18848	351 aa	Predicted RBP	10.75	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms